scholarly journals QTL Mapping and Identification of Candidate Genes for Heat Tolerance at the Flowering Stage in Rice

2021 ◽  
Vol 11 ◽  
Author(s):  
Lei Chen ◽  
Qiang Wang ◽  
Maoyan Tang ◽  
Xiaoli Zhang ◽  
Yinghua Pan ◽  
...  
Keyword(s):  
Heat Stress ◽  
Abiotic Stress ◽  
High Temperature ◽  
Candidate Genes ◽  
Heat Tolerance ◽  
Bulked Segregant Analysis ◽  
Abiotic Stress Tolerance ◽  
Chromosome 8 ◽  
Flowering Stage ◽  
Heat Tolerant

High-temperature stress can cause serious abiotic damage that limits the yield and quality of rice. Heat tolerance (HT) during the flowering stage of rice is a key trait that can guarantee a high and stable yield under heat stress. HT is a complex trait that is regulated by multiple quantitative trait loci (QTLs); however, few underlying genes have been fine mapped and cloned. In this study, the F2:3 population derived from a cross between Huanghuazhan (HHZ), a heat-tolerant cultivar, and 9311, a heat-sensitive variety, was used to map HT QTLs during the flowering stage in rice. A new major QTL, qHTT8, controlling HT was identified on chromosome 8 using the bulked-segregant analysis (BSA)-seq method. The QTL qHTT8 was mapped into the 3,555,000–4,520,000 bp, which had a size of 0.965 Mb. The candidate region of qHTT8 on chromosome 8 contained 65 predicted genes, and 10 putative predicted genes were found to be associated with abiotic stress tolerance. Furthermore, qRT-PCR was performed to analyze the differential expression of these 10 genes between HHZ and 9311 under high temperature conditions. LOC_Os08g07010 and LOC_Os08g07440 were highly induced in HHZ compared with 9311 under heat stress. Orthologous genes of LOC_Os08g07010 and LOC_Os08g07440 in plants played a role in abiotic stress, suggesting that they may be the candidate genes of qHTT8. Generally, the results of this study will prove useful for future efforts to clone qHTT8 and breed heat-tolerant varieties of rice using marker-assisted selection.

scholarly journals QTL Mapping and Identification of Candidate Genes for Heat Tolerance at the Flowering Stage in Rice

2020 ◽  
Author(s):  
Lei Chen ◽  
Qiang Wang ◽  
Xiaoli Zhang ◽  
Maoyan Tang ◽  
Yinghua Pan ◽  
...  
Keyword(s):  
Heat Tolerance ◽  
Bulked Segregant Analysis ◽  
Abiotic Stress Tolerance ◽  
Rice Variety ◽  
Complex Trait ◽  
High Temperature Stress ◽  
Chromosome 8 ◽  
Flowering Stage ◽  
Backcross Population ◽  
Heat Tolerant

Abstract Background: High-temperature stress can cause serious abiotic damage that limits the yield and quality of rice. Heat tolerance during the flowering stage of rice is a key trait that can guarantee a high and stable yield under heat stress. Heat tolerance is a complex trait that is regulated by numerous quantitative trait loci (QTLs); of which, however, few underlying genes have been fine mapped and cloned.Results: In this study, the F2:3 population derived from a cross between Huanghuazhan (HHZ), a heat-tolerant indica cultivar, and 9311, a heat-sensitive indica rice variety, were used to map the QTLs for heat tolerance during the flowering stage of rice. The F2:3 lines were treated under 38 °C from 9:30 am to 3:30 pm continuously for 3 days in a phytotron, and spikelet fertility was assessed. A new major QTL, qHTT8, controlling heat tolerance was located on chromosome 8 using the bulked-segregant analysis (BSA)-seq method. The QTL qHTT8 was determined to be located in the 355500–4520000 bp region, with a size of 0.965 Mb. The candidate region of qHTT8 on chromosome 8 contained 65 predicted genes. Ten putative predicted genes were found to be associated with abiotic stress tolerance. In future studies, the backcross population will be constructed to fine map and validate the effect of qHTT8.Conclusion: The information obtained in this study is useful for the fine mapping and cloning of qHTT8 and breeding heat-tolerant varieties of rice using marker-assisted selection.

scholarly journals Reproductive tissues-specific meta-QTLs and candidate genes for development of heat-tolerant rice cultivars

2020 ◽  
Author(s):  
Qasim Raza ◽  
Awais Riaz ◽  
Khurram Bashir ◽  
Muhammad Sabar
Keyword(s):  
Heat Stress ◽  
Abiotic Stress ◽  
Heat Shock ◽  
Candidate Genes ◽  
Heat Tolerance ◽  
Fast Track ◽  
Reproductive Tissue ◽  
Rice Cultivars ◽  
Tissue Specific ◽  
Heat Tolerant

AbstractRice holds the key to future food security. In rice-growing areas, temperature has already reached an optimum level for growth, hence, any further increase due to global climate change could significantly reduce rice yield. Several mapping studies have identified a plethora of reproductive tissue-specific and heat stress associated inconsistent quantitative trait loci (QTL), which could be exploited for improvement of heat tolerance. In this study, we performed a meta-analysis on previously reported QTLs and identified 35 most consistent meta-QTLs (MQTLs) across diverse genetic backgrounds and environments. Genetic and physical intervals of nearly 66% MQTLs were narrower than 5 cM and 2 Mb respectively, indicating hotspot genomic regions for heat tolerance. Comparative analyses of MQTLs underlying genes with microarray and RNA-seq based transcriptomic data sets revealed a core set of 45 heat-responsive genes, among which 24 were reproductive tissue-specific and have not been studied in detail before. Remarkably, all these genes corresponded to various stress associated functions, ranging from abiotic stress sensing to regulating plant stress responses, and included heat-shock genes (OsBiP2, OsMed37_1), transcription factors (OsNAS3, OsTEF1, OsWRKY10, OsWRKY21), transmembrane transporters (OsAAP7A, OsAMT2;1), sugar metabolizing (OsSUS4, α-Gal III) and abiotic stress (OsRCI2-7, SRWD1) genes. Functional data evidences from Arabidopsis heat-shock genes also suggest that OsBIP2 may be associated with thermotolerance of pollen tubes under heat stress conditions. Furthermore, promoters of identified genes were enriched with heat, dehydration, pollen and sugar responsive cis-acting regulatory elements, proposing a common regulatory mechanism might exist in rice for mitigsating reproductive stage heat stress. These findings strongly support our results and provide new candidate genes for fast-track development of heat-tolerant rice cultivars.Key MessageBy integrating genetics and genomics data, reproductive tissues-specific and heat stress responsive 35 meta-QTLs and 45 candidate genes were identified, which could be exploited through marker-assisted breeding for fast-track development of heat-tolerant rice cultivars.

scholarly journals Effect of Heat Treatment on Physiological and Recovery Growth Status of Two Tomato Cultivars With Different Heat Susceptibility

2021 ◽  
Author(s):  
Sherzod Nigmatullayevich Rajametov ◽  
Eun Young Yang ◽  
Hyo Bong Jeong ◽  
Myeong Cheoul Cho ◽  
Soo-Young Chae ◽  
...  
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Stress Tolerance ◽  
Heat Tolerance ◽  
Fruit Set ◽  
Fruit Size ◽  
Seedling Stage ◽  
Screening Methods ◽  
Tomato Cultivars ◽  
Heat Tolerant

High temperature seriously effects on plant vegetative and reproductive development and reduces productivity of plants, while to increase crop yield is the main target in most crop heat stress tolerance improvement breeding programs, not just survival, under high temperature. Our aim was to compare temperature stress tolerance in two commercial tomato cultivars “Dafnis” (big fruit size) and “Minichal” (cherry fruit size) to develop early screening methods and find out survival rate and physiological responses of tomato cultivars on high temperature (40°C and within 70% RH, day/night) in 4-5 true leaf seedling stage- (4LS) and identifies the linkage of heat tolerance with fruit set and leaf heat damage rates (LHD) in seedling stage with subsequent vegetative traits at recovery. Results showed that heat stress significantly affected on physiological-chemical and vegetative parameters of seedlings regardless of tomato cultivars. Survival and the threshold level of high temperature tolerance in the seedlings of cv. “Dafnis” and “Minichal” were identified on days 7 and 9, respectively. Our findings revealed that photosynthesis (PN, Gs, Ci, Tr) parameters were increased and CHL content persisted steady value in cv. “Minichal” during heat stress period, however EC and RPL rates were lower than cv. “Dafnis”. Heat stress reduced the SFW in both cultivars in seedling stage, but PH and RFW were significantly decreased in the heat tolerant cv. “Minichal”, whereas this parameters were not significantly ranged in the heat susceptible cv. “Dafnis”. Additionally, there no found linkage between vegetative parameters with decreasing of PN and CHL rates during HT of seedlings. In plants of cv. “Minichal” with LHD-25, 50 and 75% were no found significant differences in PH, whereas in cv. “Dafnis” significant differences were determined in plants with LHD-75%, and the significant differences in rates of SFW and RFW were observed in plants of cv. “Dafnis” having LHD-75% for 28 days of recovery at NT condition. Taken together, we concluded that heat stress affected on physiological parameters regardless of tolerance level, and to identify heat tolerant genotype in tomato breeding program, screening and selection genotypes have to be evaluated at the vegetative and reproductive stages with consideration fruit size types. Since we could not find linkage between heat tolerances in seedling stage with fruit set at the reproductive stage and fruit set cannot be used as a general predictor of heat tolerance.

Agronomic, physiological and molecular characterisation of rice mutants revealed the key role of reactive oxygen species and catalase in high-temperature stress tolerance

2020 ◽  
Vol 47 (5) ◽  
pp. 440 ◽  
Author(s):  
Syed Adeel Zafar ◽  
Amjad Hameed ◽  
Muhammad Ashraf ◽  
Abdus Salam Khan ◽  
Zia-ul- Qamar ◽  
...  
Keyword(s):  
Reactive Oxygen Species ◽  
Heat Stress ◽  
High Temperature ◽  
Grain Yield ◽  
Temperature Stress ◽  
Heat Tolerance ◽  
High Temperature Stress ◽  
Oxygen Species ◽  
Selection Indices ◽  
Heat Tolerant

Climatic variations have increased the occurrence of heat stress during critical growth stages, which negatively affects grain yield in rice. Plants adapt to harsh environments, and particularly high-temperature stress, by regulating their physiological and biochemical processes, which are key tolerance mechanisms. The identification of heat-tolerant rice genotypes and reliable selection indices are crucial for rice improvement programs. Here, we evaluated the response of a rice mutant population for high-temperature stress at the seedling and reproductive stages based on agronomic, physiological and molecular indices. Estimates of variance components revealed significant differences (P < 0.001) among genotypes, treatments and their interactions for almost all traits. The principal component analysis showed significant diversity among genotypes and traits under high-temperature stress. The mutant HTT-121 was identified as the most heat-tolerant mutant with higher grain yield, panicle fertility, cell membrane thermo-stability (CMTS) and antioxidant enzyme levels under heat stress. Various seedling-based morpho-physiological traits (leaf fresh weight, relative water contents, malondialdehyde, CMTS) and biochemical traits (superoxide dismutase, catalase and hydrogen peroxide) explained variations in grain yield that could be used as selection indices for heat tolerance in rice during early growth. Notably, heat-sensitive mutants accumulated reactive oxygen species, reduced catalase activity and upregulated OsSRFP1 expression under heat stress, suggesting their key roles in regulating heat tolerance in rice. The heat-tolerant mutants identified in this study could be used in breeding programs and to develop mapping populations to unravel the underlying genetic architecture for heat-stress adaptability.

scholarly journals Heat-induced Leaf Senescence and Hormonal Changes for Thermal Bentgrass and Turf-type Bentgrass Species Differing in Heat Tolerance

2007 ◽  
Vol 132 (2) ◽  
pp. 185-192 ◽  
Author(s):  
Yan Xu ◽  
Bingru Huang
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Leaf Senescence ◽  
Heat Tolerance ◽  
Photochemical Efficiency ◽  
Creeping Bentgrass ◽  
Zeatin Riboside ◽  
Hormonal Changes ◽  
Heat Tolerant ◽  
Aba Content

Leaf senescence can be induced by many environmental stresses, including supraoptimal temperatures. The objectives of this study were to evaluate leaf senescence induced by heat stress for two Agrostis species contrasting in heat tolerance and to examine whether heat-induced leaf senescence in both species was associated with changes in three major senescence-related hormones: ethylene, abscisic acid (ABA), and cytokinins. Plants of heat-tolerant rough bentgrass (Agrostis scabra Willd.) and heat-sensitive creeping bentgrass (Agrostis stolonifera L.) were exposed to 35/30 °C (day/night) (high temperature) or 20/15 °C (control) for 35 d in growth chambers. Turf quality, photochemical efficiency (Fv/Fm), and the contents of two pigments (chlorophyll and carotenoid) for both species decreased under high temperature; however, heat-tolerant A. scabra exhibited delayed and less severe decline in all parameters compared with heat-sensitive A. stolonifera. Ethylene production rate increased in both species at 35 °C, but the increase was observed 21 days later in A. scabra compared with that in A. stolonifera. ABA content increased at the initiation of heat stress and then declined in both species after prolonged heat stress. However, the timing of the increase was delayed for 7 days and the highest level of ABA content was less in A. scabra (4.0 times that of the control) than that in A. stolonifera (5.9 times that of the control). Decreases in both forms of cytokinins (transzeatin/zeatin riboside and isopentenyl adenosine) were also delayed for 14 days and less pronounced in A. scabra. Correlation analysis revealed that leaf senescence induced by heat stress was negatively correlated to ethylene and ABA accumulation and positively correlated to cytokinin production. Delayed leaf senescence in A. scabra under heat stress could be related to slower and less magnitude of changes in ethylene, ABA, and cytokinins.

scholarly journals Evaluation of seedling proline content of wheat genotypes in relation to heat tolerance

1970 ◽  
Vol 40 (1) ◽  
pp. 17-22 ◽  
Author(s):  
JU Ahmed ◽  
MA Hassan
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Heat Tolerance ◽  
Negative Correlation ◽  
Significant Negative Correlation ◽  
Proline Content ◽  
Membrane Injury ◽  
Wheat Genotypes ◽  
Membrane Thermostability ◽  
Heat Tolerant

Seedling of 20 wheat genotypes were grown in Phytotron at about 25 and 35°C for measuring membrane injury in per cent and seedling proline content to investigate seedling proline as screening criterion against heat stress. The wheat genotypes (Bijoy, Sufi, Kanchan, Fang 60, BAW 1059, BL 1883, BL 1022, IVT 7, IVT 8, IVT 9, IVT 10 and BAW 917) showing < 50% membrane injury were grouped as heat tolerant (HT) and the genotypes (Shatabdi, Prodip, BAW 1064, Gourab, Pavon 76, Sonora, Kalyansona and IVT 6) showing ≥ 50% membrane injury were classified as heat sensitive (HS). At high temperature (35°C) the HT genotypes produced more than double (> 200%) proline than that of 25°C but the HS genotypes produced less quantity of proline at 35°C compared to that in HT genotypes. The seedling proline content at 35°C and membrane injury (%) maintained a significant negative correlation (r = – 0.619**) across the 20 wheat genotypes tested. Key words: Membrane thermostability; Seedling proline; Heat tolerance; Wheat DOI: http://dx.doi.org/10.3329/bjb.v40i1.7991 Bangladesh J. Bot. 40(1): 17-22, 2011 (June)

scholarly journals Development of an in vitro Microtuberization and Temporary Immersion Bioreactor System to Evaluate Heat Stress Tolerance in Potatoes (Solanum tuberosum L.)

2021 ◽  
Vol 12 ◽  
Author(s):  
Sanjeev Gautam ◽  
Nora Solis-Gracia ◽  
Megan K. Teale ◽  
Kranthi Mandadi ◽  
Jorge A. da Silva ◽  
...  
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Stress Tolerance ◽  
Heat Tolerance ◽  
Potato Variety ◽  
Temporary Immersion Bioreactor ◽  
Temporary Immersion ◽  
Bioreactor System ◽  
Heat Tolerant

High temperature (heat) stress reduces tuber yield and quality of potatoes. Screening potatoes for heat tolerance is increasingly important, considering the climate change scenario and expansion of potatoes to countries where heat stress is an issue. In vitro screening for tolerance to abiotic stresses offers several advantages, including quick evaluation of numerous genotypes (clones) in reduced space, controlled environmental conditions (temperature and photoperiod), and free from confounding variables inherent to greenhouse and field conditions. In this study, we explored the feasibility of using a temporary immersion bioreactor system for heat tolerance screening of potatoes. We determined the best hormone-free microtuberizing media for this system (MSG with 8% sucrose) to enhance microtuber number and size. Comparisons of microtubers produced at 30°C as heat treatment, with 16°C as normal condition, allowed to identify heat tolerant and susceptible potato clones. The use of bioreactors allowed distinguishing well-formed (non-deformed) from deformed microtubers. Heat stress increased the total biomass of plant tissues in all the clones. However, the effect of heat stress on microtuber number and weight varied among the clones. Incubation at 30°C decreased the weight and number of non-deformed microtubers in all the clones except for Reveille Russet in which the weight of non-deformed microtubers was significantly increased and the count of non-deformed microtubers was not affected. The potato variety Reveille Russet, which was selected under high-temperature field conditions in Texas, had many non-deformed microtubers per explant and the highest microtuber weight among four clones evaluated under heat stress. We described a faster and reliable in vitro microtuberization system for abiotic stress tolerance screening, identified Reveille Russet as a promising heat-tolerant potato variety, and confirmed Russet Burbank and Atlantic as susceptible heat-tolerant checks.

The effect of duration of heat stress during grain filling on two wheat varieties differing in heat tolerance: grain growth and fractional protein accumulation

1998 ◽  
Vol 25 (1) ◽  
pp. 13 ◽  
Author(s):  
P.J. Stone ◽  
M.E. Nicolas
Keyword(s):  
Heat Treatment ◽  
Heat Stress ◽  
High Temperature ◽  
Heat Tolerance ◽  
Grain Filling ◽  
Protein Accumulation ◽  
Tolerant Variety ◽  
Heat Tolerant ◽  
Very High ◽  
Individual Kernel

Two varieties of wheat differing in heat tolerance were exposed to very high temperature (40/19°C day/night) for periods of 1–10 days duration. Responses of grain dry matter, water and fractional protein accumulation to high temperature were monitored throughout grain filling in the heat- sensitive variety, and at maturity only in the heat-tolerant variety. Results are compared with controls maintained at 21/16°C day/night. As little as 1 day of heat treatment reduced kernel mass by 14% in the heat-sensitive variety (Oxley), but by only 5% in the heat-tolerant variety (Egret). In both varieties, the reduction of individual kernel mass due to high temperature increased linearly with increased duration of heat treatment, such that after the first day of heat stress, each additional day of treatment reduced mature individual kernel mass by a further 1.6%. For a given duration of heat treatment, the difference in response of the two varieties was constant (9%), indicating that the varietal difference in heat tolerance was maintained for both brief and extended periods of very high temperature. Responses of grain water content and fractional protein accumulation to duration of heat stress are discussed.

scholarly journals Small Heat Shock Proteins, Morphological and Physiological Characteristics Associated with Heat Tolerance in Salvia (Salvia splendens)

HortScience ◽  
2005 ◽  
Vol 40 (4) ◽  
pp. 1115B-1115
Author(s):  
Seenivasan Natarajan ◽  
Jeff Kuehny
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Heat Tolerance ◽  
Small Heat Shock Proteins ◽  
Water Soluble ◽  
Soluble Carbohydrate ◽  
Heat Tolerant ◽  
Shock Proteins

Small heat shock proteins (sHSP) are a specific group of highly conserved proteins produced in almost all living organisms under heat stress. These sHSP have been shown to help prevent damage at the biomolecular level in plants. One of the greatest impediments to production of marketable herbaceous plants and their longevity is high temperature stress. The objectives of this experiment were to study the plant responses in terms of sHSP synthesis, single leaf net photosynthesis, total water-soluble carbohydrates (WSC), and overall growth for two S. splendens cultivars differing in performance under heat stress. `Vista Red' (heat tolerant) and `Sizzler Red' (heat sensitive) were exposed to short duration (3 hours) high temperature stresses of 30, 35, and 40 °C in growth chambers. Increasing the temperature to about 10 to 15 °C above the optimal growth temperature (25 °C, control) induced the synthesis of sHSP 27 in S. splendens. Expression of these proteins was significantly greater in the heat-tolerant vs. the heat-sensitive cultivar. Soluble carbohydrate content was greater in `Vista Red', and in both the cultivars raffinose was the primary soluble carbohydrate in heat-stressed plants. Overall growth of plants was significantly different in the two cultivars studied in terms of plant height, stem thickness, number of days to flower, and marketable quality. The better performance of `Vista Red' under heat stress was attributed to its morphological characteristics, including short stature, thicker stems and leaves. sHSPs and WSC are also found to be associated with heat tolerance and heat adaptation in S. splendens.

scholarly journals Agronomic, physiological and molecular characterization of rice mutants revealed key role of ROS and catalase in high temperature stress tolerance

2019 ◽  
Author(s):  
Syed Adeel Zafar ◽  
Amjad Hameed ◽  
Muhammad Ashraf ◽  
Abdus Salam Khan ◽  
Zia-ul-Qamar ◽  
...  
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Temperature Stress ◽  
Heat Tolerance ◽  
High Temperature Stress ◽  
Early Growth ◽  
Growth Stages ◽  
Breeding Programs ◽  
Selection Indices ◽  
Heat Tolerant

AbstractPlants adapt to harsh environments particularly high temperature stress by regulating their physiological and biochemical processes, which are key tolerance mechanisms. Thus, identification of heat-tolerant rice genotypes and reliable selection indices are crucial for rice improvement programs. Here, we evaluated the response of a rice mutant population for high-temperature stress at the seedling and reproductive stages based on agronomic, physiological and molecular traits. The estimate of variance components revealed significant differences (P<0.001) among genotypes, treatments and their interaction for almost all traits. Principal component analysis showed significant diversity among the genotypes and traits under high-temperature stress. The mutant ‘HTT-121’ was identified as the most heat tolerant mutant with higher grain yield, panicle fertility, cell membrane thermo-stability (CMTS) and antioxidant enzyme levels under heat stress conditions. Various seedling-based morpho-physiological traits (leaf fresh weight, relative water contents, malondialdehyde, CMTS) and biochemical traits (superoxide dismutase, catalase and hydrogen peroxide) explained variations in grain yield that could be used as selection indices for heat tolerance in rice at early growth stages. Notably, heat sensitive mutants showed a significant accumulation of ROS level, reduced activities of catalase and upregulation of OsSRFP1 expression under heat stress, suggesting their key role in regulating heat tolerance in rice. The heat-tolerant mutants identified in this study could be used in breeding programs and the development of mapping populations to unravel the underlying genetic architecture for heat-stress adaptability.Summary text for table of contentsHeat stress probably due to changing climate scenario has become a serious threat for global rice production. On the other side, efforts to develop high yielding cultivars have led to the reduced genetic variability to withstand harsh environmental conditions. This study aimed to identify novel heat tolerant mutants developed through gamma irradiation which will provide a unique genetic resource for breeding programs. Further, we have identified reliable selection indices for screening heat-tolerant rice germplasm at early growth stages.

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