scholarly journals Expression and Regulation of PpEIN3b during Fruit Ripening and Senescence via Integrating SA, Glucose, and ACC Signaling in Pear (Pyrus pyrifolia Nakai. Whangkeumbae)

Genes ◽  
2019 ◽  
Vol 10 (6) ◽  
pp. 476 ◽  
Author(s):  
Shi ◽  
Zhang ◽  
Chen
Keyword(s):  
Shelf Life ◽  
Signaling Pathway ◽  
Fruit Ripening ◽  
Economic Value ◽  
Pcr Analysis ◽  
Pyrus Pyrifolia ◽  
Ethylene Response Factor ◽  
Developmentally Regulated ◽  
Gene Encoding ◽  
Climacteric Fruit

The economic value of fruit is reduced by having a short shelf life. Whangkeumbae is a type of sand pear (Pyrus pyrifolia) considered a climacteric fruit. The pear is famous for its smooth surface and good flavor. However, its shelf life is very short because of senescence and disease after harvest and a burst of ethylene (ET) production prompting the onset of fruit ripening. In plants, ETHYLENE INSENSITIVE3 (EIN3) and EIN3like (EIL), located in the nucleus, are important components of the ET signaling pathway and act as transcription factors. EIN3s and EILs belong to a small family involved in regulating the expression of ethylene response factor gene (ERF), whose encoding protein is the final component in the ET signaling pathway. The mutation of these components will cause defects in the ethylene pathway. In this study, one gene encoding an EIN3 was cloned and identified from Whangkeumbae and designated PpEIN3b. The deduced PpEIN3b contained a conserved EIN3 domain, a bipartite nuclear localization signal profile (NLS_BP), and an N-6 adenine-specific DNA methylase signature (N6_MTASE). PpEIN3b belongs to the EIN3 super-family by phylogenetic analysis. Quantitative RT-PCR (qRT-PCR) analysis revealed that PpEIN3b was preferentially expressed in fruit. Additionally, its expression was developmentally regulated during fruit ripening and senescence. Furthermore, PpEIN3b transcripts were obviously repressed by salicylic acid (SA) and glucose treatment in pear fruit and in diseased fruit, while it was significantly induced by 1-aminocyclopropane-1-carboxylic acid (ACC) treatment. Taken together, our results reveal the expression and regulation profiles of PpEIN3b and suggest that PpEIN3b might integrate SA, glucose, and ACC signaling to regulate fruit ripening and senescence in pear, which would provide a candidate gene for this regulation to obtain fruit with a long shelf life and improved economic value.

Pear IAA1 gene encoding an auxin-responsive Aux/IAA protein is involved in fruit development and response to salicylic acid

2014 ◽  
Vol 94 (2) ◽  
pp. 263-271 ◽  
Author(s):  
Haiyan Shi ◽  
Yanhui Wang ◽  
Zhenghong Li ◽  
Diansheng Zhang ◽  
Yufeng Zhang ◽  
...  
Keyword(s):  
Salicylic Acid ◽  
Fruit Development ◽  
Phylogenetic Analyses ◽  
Pcr Amplification ◽  
Pyrus Pyrifolia ◽  
Dimerization Domain ◽  
Developmentally Regulated ◽  
Gene Encoding ◽  
Domain Profile ◽  
Localization Signal

Shi, H., Wang, Y., Li, Z., Zhang, D., Zhang, Y., Xiang, D., Li, Y. and Zhang, Y. 2014. Pear IAA1 gene encoding an auxin-responsive Aux/IAA protein is involved in fruit development and response to salicylic acid. Can. J. Plant Sci. 94: 263–271. Auxin-responsive Aux/IAA proteins are rapidly auxin-induced, short-lived proteins that act as repressors for the auxin response factor (ARF)-activated gene expression. A gene encoding an Aux/IAA protein and designated PpIAA1 was isolated from pear (Pyrus pyrifolia). Using PCR amplification techniques, the genomic clone corresponding to PpIAA1 was isolated and shown to contain three introns with typical GT/AG boundaries defining the splice junctions. The deduced PpIAA1 protein contains the conserved features of indole-3-acetic acids (IAA): four Aux/IAA conserved domains, Aux/IAA family domain, Aux/IAA-ARF dimerization domain profile, and conserved nuclear localization signal (NLS) motifs. Phylogenetic analyses clearly demonstrated PpIAA1 has the highest homology with grape VvIAA. PpIAA1 was preferentially expressed in fruit, and moderate expression was found in anthers. Relatively low expression signal was detected in other tissues including shoots, leaves, and petals. Moreover, expression of PpIAA1 was developmentally regulated in fruit. Further study demonstrated that PpIAA1 expression in pear fruit was remarkably regulated by salicylic acid and IAA. The data suggest that PpIAA1 might be involved in the interplay between IAA and salicylic acid signaling pathway during the fruit development of pear.

scholarly journals Identification of a Gene Encoding Glutamate Decarboxylase Involved in the Postharvest Fruit Ripening Process in Banana

HortScience ◽  
2014 ◽  
Vol 49 (8) ◽  
pp. 1056-1060 ◽  
Author(s):  
Wei Hu ◽  
Ju-Hua Liu ◽  
Xiao-Ying Yang ◽  
Jian-Bin Zhang ◽  
Cai-Hong Jia ◽  
...  
Keyword(s):  
Fruit Ripening ◽  
Ethylene Production ◽  
Glutamate Decarboxylase ◽  
Ethylene Biosynthesis ◽  
Gene Encoding ◽  
Ripening Process ◽  
Climacteric Fruit ◽  
Genes Encoding ◽  
Postharvest Ripening ◽  
Exogenous Ethylene

The banana, a typical climacteric fruit, undergoes a postharvest ripening process followed by a burst in ethylene production that signals the beginning of the climacteric period. Postharvest ripening plays an important role in improving the quality of the fruit as well as limiting its shelf life. To investigate the role of glutamate decarboxylase (GAD) in climacteric ethylene biosynthesis and fruit ripening in postharvest banana, a GAD gene was isolated from banana, designated MuGAD. Coincidently with climacteric ethylene production, MuGAD expression as well as the expression of the genes encoding the Musa 1-aminocyclopropane-1-carboxylate synthase (MaACS1) and Musa 1-aminocyclopropane-1-carboxylate oxidase (MaACO1) greatly increased during natural ripening and in ethylene-treated banana. Moreover, ethylene biosynthesis, ripening progress, and MuGAD, MaACS1, and MaACO1 expression were enhanced by exogenous ethylene application and inhibited by 1-methylcyclopropene (1-MCP). Taken together, our results suggested that MuGAD is involved in the fruit ripening process in postharvest banana.

scholarly journals Identification of EIL and ERF Genes Related to Fruit Ripening in Peach

2020 ◽  
Vol 21 (8) ◽  
pp. 2846 ◽  
Author(s):  
Hui Zhou ◽  
Lei Zhao ◽  
Qiurui Yang ◽  
Mohamed Hamdy Amar ◽  
Collins Ogutu ◽  
...  
Keyword(s):  
Fruit Ripening ◽  
Prunus Persica ◽  
Gene Families ◽  
Ethylene Biosynthesis ◽  
Ethylene Response Factor ◽  
Climacteric Fruit ◽  
Ethylene Response ◽  
Ear Motif ◽  
Softening Process ◽  
Insight Into

Peach (Prunus persica) is a climacteric fruit with a relatively short shelf life due to its fast ripening or softening process. Here, we report the association of gene families encoding ethylene insensitive-3 like (EIL) and ethylene response factor (ERF) with fruit ripening in peach. In total, 3 PpEILs and 12 PpERFs were highly expressed in fruit, with the majority showing a peak of expression at different stages. All three EILs could activate ethylene biosynthesis genes PpACS1 and PpACO1. One out of the 12 PpERFs, termed PpERF.E2, is a homolog of ripening-associated ERFs in tomato, with a consistently high expression throughout fruit development and an ability to activate PpACS1 and PpACO1. Additionally, four subgroup F PpERFs harboring the EAR repressive motif were able to repress the PpACO1 promoter but could also activate the PpACS1 promoter. Promoter deletion assay revealed that PpEILs and PpERFs could participate in transcriptional regulation of PpACS1 through either direct or indirect interaction with various cis-elements. Taken together, these results suggested that all three PpEILs and PpERF.E2 are candidates involved in ethylene biosynthesis, and EAR motif-containing PpERFs may function as activator or repressor of ethylene biosynthesis genes in peach. Our study provides an insight into the roles of EILs and ERFs in the fruit ripening process.

scholarly journals Role of ethylene response factors (ERFs) in fruit ripening

2020 ◽  
Vol 4 (1) ◽  
pp. 15-20 ◽  
Author(s):  
Jin Gao ◽  
Yaoxin Zhang ◽  
Zhengguo Li ◽  
Mingchun Liu
Keyword(s):  
Fruit Ripening ◽  
Defense Responses ◽  
Ethylene Response Factor ◽  
Response Factors ◽  
Climacteric Fruit ◽  
Ethylene Response ◽  
Ethylene Signalling ◽  
Ethylene Response Factors ◽  
Flower Abscission

Abstract The ethylene response factors (ERFs) belong to the APETALA2/ethylene response factor (AP2/ERF) superfamily and act downstream of the ethylene signalling pathway to regulate the expression of ethylene responsive genes. In different species, ERFs have been reported to be involved in plant development, flower abscission, fruit ripening, and defense responses. In this review, based on the new progress made by recent studies, we summarize the specific role and mode of action of ERFs in regulating different aspects of ripening in both climacteric and non-climacteric fruits, and provide new insights into the role of ethylene in non-climacteric fruit ripening.

scholarly journals Identification and Analysis of Genes Involved in the Jasmonate Pathway in Response to Ethephon and 1-Methylcyclopropene during the Ripening of Apple Fruit

2017 ◽  
Vol 142 (3) ◽  
pp. 184-191 ◽  
Author(s):  
Jingyi Lv ◽  
Yonghong Ge ◽  
Canying Li ◽  
Mengyuan Zhang ◽  
Jianrong Li
Keyword(s):  
Signaling Pathway ◽  
Fruit Ripening ◽  
Expression Profiles ◽  
Ethylene Biosynthesis ◽  
Apple Fruit ◽  
Pcr Analysis ◽  
Allene Oxide ◽  
Ripening Stage ◽  
Early Ripening ◽  
Ethephon Treatment

Fruit ripening is a complex process involving many physiological changes and the dynamic interplay between different phytohormones. In addition to ethylene, jasmonates (JAs) have also been demonstrated to play an important role in the regulation of fruit ripening. However, the mechanisms underlying the interaction between these two pathways during fruit ripening are unknown. In recent years, research has been conducted to illustrate the effects of JAs on the ethylene biosynthesis and signaling pathway, but little is known regarding the effects of ethylene on JA biosynthesis and the signaling pathway during fruit ripening. Herein, we aimed to evaluate the effects of ethylene on JA biosynthesis in ripening apple (Malus ×domestica) fruit and on the expression of key genes involved in the JA biosynthesis and the signaling pathway. For this purpose, we treated apple fruit with ethephon and 1-methylcyclopropene (1-MCP) at commercial maturity. Our data indicated that endogenous JA content and allene oxide synthase (AOS) activity were reduced by ethephon treatment at the early ripening stage, whereas they were enhanced by 1-MCP treatment at the late ripening stage. Quantitative real-time polymerase chain reaction (PCR) analysis revealed that the expression profiles of three AOS genes (MdAOS2, MdAOS3, and MdAOS5) and two lipoxygenase (LOX) genes (MdLOX22 and MdLOX28) showed similar trends with the change of AOS activity in all groups during fruit ripening. The expression of MdLOX21 and MdLOX23 was in accordance with the change of ethylene production on ripening, and it was positively regulated by ethylene, whereas the opposite effect was observed for MdLOX39 expression. The transcription of MdLOX310 and MdLOX61 appeared unaffected by ethylene during fruit ripening. Three jasmonate ZIM-domain (JAZ) genes (MdJAZ9, MdJAZ10, and MdJAZ18) were differentially upregulated by ethephon treatment whereas being downregulated by 1-MCP treatment during fruit ripening. Expression of MdJAZ13 and MdJAZ14 was downregulated at the early ripening stage by both treatments. Our results suggested regulating roles of ethylene on the JA biosynthesis and signaling pathway during fruit ripening and senescence.

scholarly journals The NAM/ATAF1/2/CUC2 transcription factor PpNAC.A59 enhances PpERF.A16 expression to promote ethylene biosynthesis during peach fruit ripening

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Zhi-Hua Guo ◽  
You-Jia Zhang ◽  
Jia-Long Yao ◽  
Zhi-Hua Xie ◽  
Yu-Yan Zhang ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Carboxylic Acid ◽  
Fruit Ripening ◽  
Genetic Network ◽  
Ethylene Biosynthesis ◽  
Ethylene Response Factor ◽  
Acid Oxidase ◽  
Peach Fruit ◽  
Climacteric Fruit ◽  
Exogenous Ethylene

AbstractPeach is a typical climacteric fruit that releases ethylene during fruit ripening. Several studies have been conducted on the transcriptional regulation of ethylene biosynthesis in peach fruit. Herein, an ethylene response factor, PpERF.A16, which was induced by exogenous ethylene, could enhance ethylene biosynthesis by directly inducing the expression of 1-aminocyclopropane-1-carboxylic acid synthase (PpACS1) and 1-aminocyclopropane-1-carboxylic acid oxidase (PpACO1) genes. Moreover, the NAM/ATAF1/2/CUC2 (NAC) transcription factor (TF) PpNAC.A59 was coexpressed with PpERF.A16 in all tested peach cultivars. Interestingly, PpNAC.A59 can directly interact with the promoter of PpERF.A16 to induce its expression but not enhance LUC activity driven by any promoter of PpACS1 or PpACO1. Thus, PpNAC.A59 can indirectly mediate ethylene biosynthesis via the NAC-ERF signaling cascade to induce the expression of both PpACS1 and PpACO1. These results enrich the genetic network of fruit ripening in peach and provide new insight into the ripening mechanism of other perennial fruits.

Molecular characterization of pear 14-3-3b gene regulated during fruit development

2016 ◽  
Vol 96 (3) ◽  
pp. 433-438
Author(s):  
Haiyan Shi ◽  
Yujing Zhao ◽  
Xuemin An ◽  
Yuxing Zhang
Keyword(s):  
Protein Interactions ◽  
Pcr Amplification ◽  
Pcr Analysis ◽  
Pyrus Pyrifolia ◽  
Biological Processes ◽  
Protein Protein Interactions ◽  
Rt Pcr ◽  
Developmentally Regulated ◽  
Amplification Technique

Plant 14-3-3 proteins (14-3-3s) are known to function in protein–protein interactions that mediate signal transduction pathways regulating many biological processes. The cDNA encoding putative 14-3-3 protein was isolated from pear (Pyrus pyrifolia) and designated Pp14-3-3b. Using the PCR amplification technique, the genomic clone corresponding to Pp14-3-3b was isolated and shown to contain six introns. Phylogenetic analysis clearly demonstrated that Pp14-3-3b was classified into the non-ɛ class of 14-3-3 superfamilies. Quantitative RT-PCR analysis indicated that the expression of the Pp14-3-3b gene was developmentally regulated in fruit. This study suggested that Pp14-3-3b might be involved in fruit ripening and the senescence of pear.

scholarly journals Analysis of ethylene biosynthesis gene expression profile during titanium dioxide (TiO2) treatment to develop a new banana postharvest technology

2019 ◽  
Vol 24 (2) ◽  
pp. 88
Author(s):  
Fenny M Dwivany ◽  
Rizkita R Esyanti ◽  
Veinardi Suendo ◽  
Aksarani ‘Sa Pratiwi ◽  
Annisa A Putri
Keyword(s):  
Gene Expression ◽  
Shelf Life ◽  
Fruit Ripening ◽  
Ethylene Biosynthesis ◽  
Banana Fruit ◽  
Ripening Process ◽  
Climacteric Fruit ◽  
Expression Of Genes ◽  
Biosynthesis Gene ◽  
Postharvest Handling

Banana is an important crop that demands proper methods in postharvest handling. As a climacteric fruit, thebanana fruit ripening process is affected by ethylene. Several methods have been developed to extend the shelf life of a banana, such as using ethylene scrubbers. In this study, ttanium dioxide (TiO2), a photocatalyst, was used as an alternatve method to delay the fruit ripening process. The effect of TiO2 on the ripening‐related gene MaACS1 was investgated. Banana fruits were placed in a TiO2‐coated glass chamber and observed for ten days. Fruit ripening in the treated chamber was delayed for eight days compared to the control. Total RNA was extracted from control and TiO2‐treated fruit pulp and synthesized into cDNA. Reverse transcripton PCR was performed to investgate the gene expression, which showed that MaACS1 expression was relatvely lower than treated control. The fnding of these studies suggested that the TiO2 chamber has the potental to extend the shelf life of banana by delaying its ripening process and decreasing the expression of MaACS1. To the best of our knowledge, no previous study has investgated the effect of TiO2 on the expression of genes related to banana fruit ripening.

scholarly journals Genome-Wide Identification of the 1-Aminocyclopropane-1-carboxylic Acid Synthase (ACS) Genes and Their Possible Role in Sand Pear (Pyrus pyrifolia) Fruit Ripening

Horticulturae ◽  
2021 ◽  
Vol 7 (10) ◽  
pp. 401
Author(s):  
Jing-Guo Zhang ◽  
Wei Du ◽  
Jing Fan ◽  
Xiao-Ping Yang ◽  
Qi-Liang Chen ◽  
...  
Keyword(s):  
Carboxylic Acid ◽  
Fruit Ripening ◽  
Ethylene Production ◽  
Storage Life ◽  
Pcr Analysis ◽  
Pyrus Pyrifolia ◽  
Fruit Storage ◽  
Chinese White ◽  
Close Relationship ◽  
System 1

Ethylene production is negatively associated with storage life in sand pear (Pyrus pyrifoliaNakai), particularly at the time of fruit harvest. 1-Aminocyclopropane-1-carboxylic acid synthase (ACS) is the rate-limiting enzyme in ethylene biosynthesisand is considered to be important for fruit storage life. However, the candidate ACS genes and their roles in sand pear remain unclear. The present study identified 13ACS genes from the sand pear genome.Phylogenetic analysiscategorizedthese ACS genesinto four subgroups (type Ⅰ, type Ⅱ, type Ⅲ and putative AAT), and indicated a close relationship between sand pear and Chinese white pear (P. bretschneideri). According to the RNA-seq data and qRT-PCR analysis, PpyACS1, PpyACS2, PpyACS3, PpyACS8, PpyACS9, PpyACS12 and PpyACS13 were differently expressed in climacteric and non-climacteric-typepear fruits,‘Ninomiyahakuri’ and ‘Eli No.2′, respectively, during fruit ripening. In addition, the expressions of PpyACS2, PpyACS8, PpyACS12 and PpyACS13 werefound to be associated with system 1 of ethylene production, while PpyACS1, PpyACS3, and PpyACS9 werefound to be associated with system 2, indicating that these ACS genes have different roles in ethylenebiosynthesis during fruit development. Overall, our study provides fundamental knowledge onthe characteristics of the ACS gene family in sand pear, in addition to their possible roles infruit ripening.

scholarly journals The FKBP4 Gene, Encoding a Regulator of the Androgen Receptor Signaling Pathway, Is a Novel Candidate Gene for Androgen Insensitivity Syndrome

2020 ◽  
Vol 21 (21) ◽  
pp. 8403
Author(s):  
Erkut Ilaslan ◽  
Renata Markosyan ◽  
Patrick Sproll ◽  
Brian J. Stevenson ◽  
Malgorzata Sajek ◽  
...  
Keyword(s):  
Androgen Receptor ◽  
Signaling Pathway ◽  
Gene Mutation ◽  
Gene Mutations ◽  
Androgen Insensitivity Syndrome ◽  
Homologous Gene ◽  
Gene Encoding ◽  
Androgen Insensitivity ◽  
Disorder Of Sexual Development ◽  
Partial Androgen Insensitivity Syndrome

Androgen insensitivity syndrome (AIS), manifesting incomplete virilization in 46,XY individuals, is caused mostly by androgen receptor (AR) gene mutations. Therefore, a search for AR mutations is a routine approach in AIS diagnosis. However, some AIS patients lack AR mutations, which complicates the diagnosis. Here, we describe a patient suffering from partial androgen insensitivity syndrome (PAIS) and lacking AR mutations. The whole exome sequencing of the patient and his family members identified a heterozygous FKBP4 gene mutation, c.956T>C (p.Leu319Pro), inherited from the mother. The gene encodes FKBP prolyl isomerase 4, a positive regulator of the AR signaling pathway. This is the first report describing a FKBP4 gene mutation in association with a human disorder of sexual development (DSD). Importantly, the dysfunction of a homologous gene was previously reported in mice, resulting in a phenotype corresponding to PAIS. Moreover, the Leu319Pro amino acid substitution occurred in a highly conserved position of the FKBP4 region, responsible for interaction with other proteins that are crucial for the AR functional heterocomplex formation and therefore the substitution is predicted to cause the disease. We proposed the FKBP4 gene as a candidate AIS gene and suggest screening that gene for the molecular diagnosis of AIS patients lacking AR gene mutations.

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