scholarly journals Diversity, Dispersal and Mode of Reproduction of Amanita exitialis in Southern China

Genes ◽  
2021 ◽  
Vol 12 (12) ◽  
pp. 1907
Author(s):  
Juan Zhong ◽  
Jianping Xu ◽  
Ping Zhang

Amanita exitialis is a poisonous mushroom and has caused many deaths in southern China. In this study, we collected 118 fruiting bodies of A. exitialis from seven different sites in Guangdong Province in southern China and investigated their genetic relationships using 14 polymorphic molecular markers. These 14 markers grouped the 118 fruiting bodies into 20 multilocus genotypes. Among these 20 genotypes, eight were each found only once while the remaining 12 were each represented by two to 54 fruiting bodies. Interestingly, among the 12 shared genotypes, four were shared between/among local populations that were separated by as far as over 80 km, a result consistent with secondary homothallic reproduction and long-distance spore dispersal. Despite the observed gene flow, significant genetic differentiations were found among the local populations, primarily due to the over-representation of certain genotypes within individual local populations. STRUCTURE analyses revealed that the 118 fruiting bodies belonged to three genetic clusters, consistent with divergence within this species in this geographic region. Interestingly, we found an excess of heterozygous individuals at both the local and the total sample level, suggesting potential inbreeding depression and heterozygous advantage in these populations of A. exitialis. We discuss the implications of our results for understanding the life cycle, dispersal, and evolution of this poisonous mushroom.

2020 ◽  
Author(s):  
Yibing Zeng ◽  
Tao Xiong ◽  
Bei Liu ◽  
Elma Carstens ◽  
Xiangling Chen ◽  
...  

Phyllosticta citriasiana is the causal agent of citrus tan spot, an important pomelo disease in Asia. At present, there is little or no information on the epidemiology or population structure of P. citriasiana. Using simple sequence repeat (SSR) markers, 94 isolates obtained from three pomelo production regions in southern/southeastern China were analyzed. The analyses showed high genetic diversity in each of the three geographic populations. A STRUCTURE analysis revealed two genetic clusters among the 94 isolates, one geographic population was dominated by genotypes in one cluster while the other two geographic populations were dominated by genotypes of the second cluster. P. citriasiana has a heterothallic mating system with two idiomorphs, MAT1-1 and MAT1-2. Analyses using mating type-specific primers revealed that both mating types were present in all three geographic populations, and in all three populations the mating type ratios were in equilibrium. Although the sexual stage of the fungus has not been discovered yet, analyses of allelic associations indicated evidence for sexual and asexual reproduction within and among populations. Despite the observed genetic differentiation among the three geographic populations, evidence for long-distance gene flow was found.


2019 ◽  
Vol 286 (1897) ◽  
pp. 20182253 ◽  
Author(s):  
Matthew W. Chmielewski ◽  
Sarah M. Eppley

Animal dispersal influences the community structure and diversity of a wide variety of plant taxa, yet the potential effects of animal dispersal in bryophytes (hornworts, liverworts, and mosses) is poorly understood. In many communities, birds use bryophyte-abundant niche space for foraging and gathering nest material, suggesting that birds may play a role in bryophyte dispersal. As highly motile animals with long migratory routes, birds potentially provide a means for both local and long-distance bryophyte dispersal in a manner that differs greatly from passive, aerial spore dispersal. To examine this phenomenon, we collected and germinated bryophyte propagules from the legs, feet and tails of 224 birds from 34 species within a temperate forest community. In total we found 1512 spores, and were able to germinate 242 bryophyte propagules. In addition, we provide evidence that topical (externally-carried) spore load varies by bird species and behaviour. Tail feather spore abundance is highest in bark and foliage gleaning species and is positively correlated with tarsal length. Together, these data suggest that a variety of forest birds exhibit the potential to act as dispersal vectors for bryophyte propagules, including an abundance of spores, and that understanding the effects of animal behaviour on bryophyte dispersal will be key to further understanding this interaction.


Plant Disease ◽  
2012 ◽  
Vol 96 (4) ◽  
pp. 586-586 ◽  
Author(s):  
Y. Gai ◽  
Q. Deng ◽  
R. Pan ◽  
X. Chen ◽  
M. Deng

In July 2010, a serious disease of peanut (Arachis hypogaea) resembling Cylindrocladium black rot (CBR) was found in Longnan County, Jiangxi Province, China. Symptoms included chlorotic, yellowish and blighted leaves, and wilting of the plants. Taproots and hypocotyls were blackened and rotted. Clusters of reddish orange spherical fruiting bodies appeared in the lesions present on basal stems, pegs, pods, and roots of peanut. Disease incidence reached as much as 50% in some patches of the field. Plants with symptoms were sampled from fields. Microscopic examination revealed that the reddish orange, spherical fruiting bodies were the perithecia and measured 461.6 (337.5 to 609.4) × 395.5 (309.4 to 496.9) μm. With gentle pressure, asci and ascospores were exuded from perithecia. The asci were hyaline, thin walled, and long stalked. Ascospores were hyaline, falcate with one septum, and measured 43.5 (27.3 to 54.5) × 5.6 (4.1 to 6.8) μm with a length/width (L/W) ratio of 7.8 ± 1.3. A fungus with white-to-pale buff border mycelia and yellowish brown pigment was consistently isolated from the edge of basal stem lesions on potato dextrose agar at 25°C. Mycelia grew at temperatures ranging from 8 to 32°C and the optimum was 25 to 26°C. To determine the species, single-conidial isolates of the fungus were cultured on carnation leaf agar for 7 days at 25°C and 12 h of light/dark conditions. Conidia were hyaline, cylindrical with one to three septa (mostly three septa), and measured 49.3 (27.3 to 70.9) × 5.9 (4.1 to 6.8) μm with L/W ratio of 8.4 ± 1.6. Vesicles were globose and measured 5.5 to 10.9 μm in diameter. The fungus was identified as Cylindrocladium parasiticum (teleomorph Calonectria ilicicola) (1,2). A PCR assay was conducted on one representative isolate (JXLN32) by analyzing multilocus sequences of the TUB2 (coding β-tubulin protein), ACT (coding actin), and CaM gene (coding calmodulin protein) and were amplified and sequenced using the primers reported by Crous et al. (3). Sequences of the studied DNA regions were submitted to GenBank (Accession Nos. TUB2: JF429649; ACT: JQ070809; and CaM: JQ070808). BLAST searches with the existing sequences in GenBank showed that there was 99 to 100% identity with the existing sequences of C. ilicicola (GenBank Accession Nos. TUB2: AY725643; ACT: GQ280446; and CaM: GQ267402). To complete Koch's postulates, inoculum was prepared by mixing the microsclerotia (MS) suspension of the isolate (JXLN32) with soil at a proportion of 10 MS per g of soil. Ten replicate plastic pots containing five peanut seeds (cv. Yueyou 7) each were planted and placed in a glasshouse at 25 ± 2°C. The same number of peanut seeds was used as an uninoculated control. Typical basal stem and roots rot symptoms of CBR were observed in 2 months and C. parasiticum was reisolated from these inoculated diseased plants. No symptoms were detected on the control plants. To our knowledge, this is the first finding of Cylindrocladium black rot in Jiangxi Province, which is the main peanut-producing area in China. The disease has been previously reported in Guangdong Province in southern China but is not known elsewhere (4). Because of its ability to spread through seed and soil and its destructive potential, this pathogen may pose a serious threat to peanut production in China. References: (1) D. K. Bell and E. K. Sobers. Phytopathology 56:1361, 1966. (2) P. W. Crous et al. Mycol. Res. 97:889, 1993. (3) P. W. Crous et al. Stud. Mycol. 50:415, 2004. (4) R. Pan et al. Plant Pathol. 58:1176, 2009.


Zootaxa ◽  
2007 ◽  
Vol 1425 (1) ◽  
pp. 1-10 ◽  
Author(s):  
BRENT D. OPELL ◽  
ANDREA M. BERGER ◽  
SOPHIA M. BOUS ◽  
MICHAEL L. MANNING

Members of the genus Amaurobioides construct silk retreats in rock crevices of the marine spray zone, a harsh and unusual habitat for spiders. This study expands the distribution records of three morphological species of Amaurobioides found on the eastern and southern coasts of New Zealand’s South Island and uses mitochondrial DNA to examine their relationships and characterize their dispersal capabilities. Both 16S and ND1 sequences distinguish A. pletus found on the northeastern coast from a complex of two southern species comprised of A. maritimus from the mainland and A. picunus from Stewart Island. Neither 16S DNA nor ND1 protein separates these southern species. However, ND1 parsimony and likelihood analyses place 10 of 11 Stewart Island specimens in a clade of low support that nests deeply within A. maritimus. A nested haplotype analysis characterizes A. maritimus and A. picunus populations as having restricted gene flow/dispersal but with some long distance dispersal. Genetic distances between A. pletus and the A. maritimus-A. picunus complex indicate a Pliocene origin, whereas distances between A. maritimus and A. picunus suggest a Pleistocene divergence.


1983 ◽  
Vol 61 (6) ◽  
pp. 1809-1814 ◽  
Author(s):  
Kathryn Carvey Crist ◽  
Donald R. Farrar

Solitary plants of Asplenium platyneuron occur disjunctively on recently produced coal spoils in southern Iowa. They are assumed to have been produced by self-fertilization of isolated gametophytes and therefore highly homozygous. Cultures of isolated and paired gametophytes originating from these solitary sporophytes produced second-generation sporophytes with 89 and 93% success, respectively, indicating a low genetic load as expected. The failure of gametophytes from coal-spoil plants to produce sporophytes with even greater success may result from homoeologous chromosome pairing and recombination at meiosis which allows production of variable spores and expression of genetic load from plants produced by self-fertilization of single gametophytes. Cultures of isolated and paired gametophytes originating from sporophytes in populations central to the species' range produced second-generation sporophytes with 83 and 90% success, respectively, indicating a significantly greater genetic load in populations but still a relatively low genetic load for the species. Through low genetic load, regularity of sporophyte production from isolated gametophytes, and ability of such plants to release variability through homoeologous chromosome pairing, Asplenium platyneuron is remarkably adapted for, and successful in, colonizing distant habitats through long-range spore dispersal.


1999 ◽  
Vol 73 (10) ◽  
pp. 8741-8749 ◽  
Author(s):  
Juhana Santti ◽  
Timo Hyypiä ◽  
Leena Kinnunen ◽  
Mika Salminen

ABSTRACT Human enteroviruses consist of more than 60 serotypes, reflecting a wide range of evolutionary divergence. They have been genetically classified into four clusters on the basis of sequence homology in the coding region of the single-stranded RNA genome. To explore further the genetic relationships between human enteroviruses and to characterize the evolutionary mechanisms responsible for variation, previously sequenced genomes were subjected to detailed comparison. Bootstrap and genetic similarity analyses were used to systematically scan the alignments of complete genomic sequences. Bootstrap analysis provided evidence from an early recombination event at the junction of the 5′ noncoding and coding regions of the progenitors of the current clusters. Analysis within the genetic clusters indicated that enterovirus prototype strains include intraspecies recombinants. Recombination breakpoints were detected in all genomic regions except the capsid protein coding region. Our results suggest that recombination is a significant and relatively frequent mechanism in the evolution of enterovirus genomes.


Retos ◽  
2015 ◽  
pp. 136-139
Author(s):  
Francisco Ruiz-Juan ◽  
Antonio Zarauz ◽  
Gabriel Flores-Allende

En la creciente población de corredores españoles y mexicanos de ruta se analiza la influencia en la puntuación de variables socio-demográficas en su percepción del éxito. Se concluye que, aun siendo medias las puntuaciones obtenidas en orientación al ego y a la tarea en ambos sexos y nacionalidades, son significativamente mayores las puntuaciones en la orientación al ego respecto a la tarea y las obtenidas por los mexicanos respecto a los españoles. Además, sólo el hecho de tener entrenador y una menor edad parecen ser las variables que más claramente influyen en que aumente la percepción del éxito en el total de la muestra. Por ello, se hace necesario seguir estudiando la percepción del éxito de esta población incluyendo nuevas variables predictoras de la orientación al ego o a la tarea que hagan más completas las conclusiones obtenidas. Palabras clave. POSQ; variables socio-demográficas; ego; tarea.Abstract. In the growing population of Spanish and Mexican route runners we analyzes the influence of the scoring in socio-demographic variables in their perception of success. We conclude that, although mean scores on ego orientation and the task in both sexes and nationalities, are significantly higher scores on ego orientation to the task and that obtained by Mexican regarding Spanish. Also, just having coach and younger age appear to be the variables that most clearly influence to increase the perception of success in the total sample. Therefore, it is necessary to continue studying the perception of the success of this population including new predictors variables of ego orientation or task to do more comprehensive conclusions drawn.Key words. POSQ; socio-demographic variables; ego; task.


2017 ◽  
Author(s):  
Wibhu Kutanan ◽  
Jatupol Kampuansai ◽  
Andrea Brunelli ◽  
Silvia Ghirotto ◽  
Pittayawat Pittayaporn ◽  
...  

AbstractTai-Kadai (TK) is one of the major language families in Mainland Southeast Asia (MSEA), with a concentration in the area of Thailand and Laos. Our previous study of 1,234 mtDNA genome sequences supported a demic diffusion scenario in the spread of TK languages from southern China to Laos as well as northern and northeastern Thailand. Here we add an additional 560 mtDNA sequences from 22 groups, with a focus on the TK-speaking central Thai people and the Sino-Tibetan speaking Karen. We find extensive diversity, including 62 haplogroups not reported previously from this region. Demic diffusion is still a preferable scenario for central Thais, emphasizing the extension and expansion of TK people through MSEA, although there is also some support for an admixture model. We also tested competing models concerning the genetic relationships of groups from the major MSEA languages, and found support for an ancestral relationship of TK and Austronesian-speaking groups.


2014 ◽  
Vol 8 (2) ◽  
pp. 269-274 ◽  
Author(s):  
Sunutcha Suntrarachun ◽  
Lawan Chanhome ◽  
Montri Sumontha

Abstract Background: Snakes possess adaptive characteristics of morphology that may result in incorrect reconstruction of phylogeny. Molecular approaches have become the major source of new information for advancing our understanding of evolutionary, genetic relationships, and species identification. Objective: We studied DNA sequences of Ophiophagus hannah in different parts of Thailand and compared them with those of O. hannah from other countries. Materials and Methods: We studied the mitochondrial NADH dehydrogenase subunit 2 (ND2) and control region (CR) sequences of 12 individuals O. hannah from different localities across Thailand. Phylogenetic analysis of DNA sequences were compared to the published sequences of O. hannah deposited in NCBI GenBank database from other countries. Results: O. hannah could be categorized into 2 Clades, 5 haplotypes, and 4 localities based on 43 different nucleotide positions from the 736 bp of ND2 and 673 bp of CR. Clade A was haplotype A from southern Thailand. Clade B consisted of haplotypes B, C, D, and E. Haplotype B and C came from northern Thailand. Haplotype D came from western Thailand, while haplotype E was O. hannah from central Thailand. The DNA sequences of Clade B were similar to the sequences of O. hannah in Myanmar and southern China that are already deposited in NCBI GenBank database. Conclusion: We found a different genotype of O. hannah from southern Thailand and suggest that this may be a new species of O. hannah.


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