scholarly journals Whole Genome Sequencing and Tn5-Insertion Mutagenesis of Pseudomonas taiwanensis CMS to Probe Its Antagonistic Activity Against Rice Bacterial Blight Disease

2020 ◽  
Vol 21 (22) ◽  
pp. 8639
Author(s):  
Wen-Jen Chen ◽  
Tzu-Yen Kuo ◽  
Chun-Yi Chen ◽  
Feng-Chia Hsieh ◽  
Yu-Liang Yang ◽  
...  
Keyword(s):  
Biological Control ◽  
Iron Chelator ◽  
Antagonistic Activity ◽  
Insertion Mutagenesis ◽  
Carbon And Nitrogen ◽  
Rice Bacterial Blight ◽  
Novel Bacterium ◽  
Xanthomonas Oryzae Pv.Oryzae ◽  
Shrimp Shell Waste ◽  
Blight Disease

The Gram-negative bacterium Pseudomonas taiwanensis is a novel bacterium that uses shrimp shell waste as its sole sources of carbon and nitrogen. It is a versatile bacterium with potential for use in biological control, with activities including toxicity toward insects, fungi, and the rice pathogen Xanthomonas oryzae pv.oryzae (Xoo). In this study, the complete 5.08-Mb genome sequence of P. taiwanensis CMS was determined by a combination of NGS/Sanger sequencing and optical mapping. Comparison of optical maps of seven Pseudomonas species showed that P. taiwanensis is most closely related to P. putida KT 2400. We screened a total of 11,646 individual Tn5-transponson tagged strains to identify genes that are involved in the production and regulation of the iron-chelator pyoverdine in P. taiwanensis, which is a key anti-Xoo factor. Our results indicated that the two-component system (TCS) EnvZ/OmpR plays a positive regulatory role in the production of pyoverdine, whereas the sigma factor RpoS functions as a repressor. The knowledge of the molecular basis of the regulation of pyoverdine by P. taiwanensis provided herein will be useful for its development for use in biological control, including as an anti-Xoo agent.

scholarly journals Isolation, Characterization, and Identification of Biological Control Agent for Potato Soft Rot in Bangladesh

2012 ◽  
Vol 2012 ◽  
pp. 1-6 ◽  
Author(s):  
M. M. Rahman ◽  
M. E. Ali ◽  
A. A. Khan ◽  
A. M. Akanda ◽  
Md. Kamal Uddin ◽  
...  
Keyword(s):  
Biological Control ◽  
Biological Control Agent ◽  
Erwinia Carotovora ◽  
Soft Rot ◽  
Control Agent ◽  
Antagonistic Activity ◽  
Antagonistic Effect ◽  
Antagonistic Bacteria ◽  
And Storage

A total of 91 isolates of probable antagonistic bacteria of potato soft rot bacteriumErwinia carotovorasubsp.carotovora(Ecc) were extracted from rhizospheres and endophytes of various crop plants, different soil varieties, and atmospheres in the potato farming areas of Bangladesh. Antibacterial activity of the isolated probable antagonistic bacteria was testedin vitroagainst the previously identified most common and most virulent soft rot causing bacterial strain Ecc P-138. Only two isolates E-45 and E-65 significantly inhibited thein vitrogrowth of Ecc P-138. Physiological, biochemical, and carbon source utilization tests identified isolate E-65 as a member of the genusBacillusand the isolate E-45 asLactobacillussp. The stronger antagonistic activity against Ecc P-138 was found in E-65in vitroscreening and storage potatoes. E-65 reduced the soft rot infection to 22-week storage potatoes of different varieties by 32.5–62.5% in model experiment, demonstrating its strong potential to be used as an effective biological control agent for the major pectolytic bacteria Ecc. The highest (62.5%) antagonistic effect of E-65 was observed in the Granola and the lowest (32.7%) of that was found in the Cardinal varieties of the Bangladeshi potatoes. The findings suggest that isolate E-65 could be exploited as a biocontrol agent for potato tubers.

scholarly journals Screening of endophytes from rubber trees (hevea brasiliensis) for biological control of Corticium salmonicolor

2020 ◽  
Vol 8 (2) ◽  
pp. 38-44
Author(s):  
Nguyen Van Minh ◽  
Mai Huu Phuc ◽  
Duong Nhat Linh ◽  
Tran Thi A Ni ◽  
Tran Kien Duc ◽  
...  
Keyword(s):  
Biological Control ◽  
Hevea Brasiliensis ◽  
Endophytic Bacteria ◽  
Rubber Tree ◽  
Antagonistic Activity ◽  
Ho Chi Minh City ◽  
Viet Nam ◽  
Dual Culture ◽  
Living Tissue ◽  
Tissue Samples

28 leaves and living-tissue samples of rubber tree (Hevea brasiliensis) were collected from Ho Chi Minh City, Binh Phuoc province and Binh Duong province (Viet Nam). We isolated and screened endophytes that have potential application as agents for biocontrol of Corticium salmonicolor, the agent of Pink Disease in rubber trees. As a result, 21 strains of endophytic bacteria and 14 strains of endophytic fungi were isolated. Antagonistic activity of the endophytes towards C. salmonicolor was checked by using a dual culture. Testing results showed that: T9, T15 and T16 strains have inhibited C. salmonicolor. T9 and T16 strains showed result that 100% of inhibiting C. salmonicolor at the concentration of 1:1. In the test of ability to kill C. salmonicolor, T9 and T16 strains showed that they could kill C. salmonicolor after 3 sprays of bacterial filtrate. T9 and T6 strains, which were identified by biochemical methods, have similar characteristics to Bacillus thuringiensis.

scholarly journals Evaluation of in vitro antagonistic activity of fungi from peatlands against Ganoderma species under acidic condition

2020 ◽  
Vol 21 (7) ◽  
Author(s):  
SUPRIYANTO ◽  
PURWANTO ◽  
S.H. POROMARTO ◽  
SUPYANI
Keyword(s):  
Biological Control ◽  
Antagonistic Activity ◽  
Biological Control Agents ◽  
Antagonistic Fungi ◽  
High Incidence ◽  
Acidic Conditions ◽  
Mineral Soils ◽  
Ph Range ◽  
Biological Methods

Abstract. Supriyanto, Purwanto, Poromarto SH, Supyani. 2020. Evaluation of in vitro antagonistic activity of fungi from peatlands against Ganoderma species under acidic conditions. Biodiversitas 21: 2935-2945. The use of peatlands is a significant contributor to the world’s palm oil production. A serious problem of oil palm plantations in peatlands is the high incidence of basal stem rot (BSR) disease caused by Ganoderma, which has a higher attack rate than on mineral soils. There is no effective way to control Ganoderma in peatlands. At present, the effort for the same focuses on environment-friendly biological methods; however, this is constrained by the unavailability of appropriate biological agents for peatlands. The development of biological control agents for peatlands is hampered by limited data on biological control of Ganoderma in peatlands. This research was conducted to evaluate the in vitro antagonistic activity of fungi isolated from a peatland in acidic pH conditions. Twenty-seven Ganoderma-antagonistic fungi from peatland were evaluated for their activity and their ability to antagonism in vitro within a pH range of 2-7. The results show that most antagonistic fungi from peatland, based on biomass weight, the sporulation ability, and germination of conidium, were able to grow optimally at pH 3.0-4.0, indicating that most of the Ganoderma-antagonistic fungi from peatland can be used as biological control agents for BSR on oil palms in peatlands.

Plackett-Burman Design for Media Nutrients of Biocontrol Lysinibacillus xylanilyticus BPM1 against Aflatoxin

2014 ◽  
Vol 522-524 ◽  
pp. 295-298
Author(s):  
Kai Wang ◽  
Pei Sheng Yan ◽  
Li Xin Cao
Keyword(s):  
Biological Control ◽  
Yeast Extract ◽  
Antagonistic Activity ◽  
Medium Composition ◽  
Peanut Hulls ◽  
Two Factors ◽  
Burman Design ◽  
Soya Peptone ◽  
Plackett Burman Design ◽  
Biocontrol Bacterium

Aflatoxins (AFs) are a series of highly toxic and carcinogenic secondary metabolites. In order to eliminate AFs contamination, biological control is one of the more promising techniques. In this study, we describe the optimization of media nutrients for the selected biocontrol bacterium, Lysinibacillus xylanilyticus strain BPM1. The strain was isolated from the peanut hulls in Shandong Province, China and exhibited antagonistic activity against aflatoxins. Maltose and sucrose were identified as best carbon source, while soya peptone and yeast extract as nitrogen source led to the highest OD600 observations. Medium composition was optimized using Plackett-Burman design, which was applied to find the key ingredients. The results revealed that the most significant two factors which were more effective in the fermentation of L. xylanilyticus BPM1 were soya peptone and yeast extract.

scholarly journals Genetic and physical analysis of the rice bacterial blight disease resistance locus, Xa21

1992 ◽  
Vol 236 (1) ◽  
pp. 113-120 ◽  
Author(s):  
Pamela C. Ronald ◽  
Beng Albano ◽  
Rodante Tabien ◽  
Lleva Abenes ◽  
Kung-sheng Wu ◽  
...  
Keyword(s):  
Disease Resistance ◽  
Bacterial Blight ◽  
Resistance Locus ◽  
Physical Analysis ◽  
Rice Bacterial Blight ◽  
Bacterial Blight Disease ◽  
Blight Disease

scholarly journals Identification of the Fungal Pathogens of Postharvest Disease on Peach Fruits and the Control Mechanisms of Bacillus subtilis JK-14

Toxins ◽  
2019 ◽  
Vol 11 (6) ◽  
pp. 322 ◽  
Author(s):  
Shuwu Zhang ◽  
Qi Zheng ◽  
Bingliang Xu ◽  
Jia Liu
Keyword(s):  
Biological Control ◽  
Bacillus Subtilis ◽  
Fungal Pathogens ◽  
Biological Control Agent ◽  
Storage Period ◽  
Control Agent ◽  
Antagonistic Activity ◽  
Postharvest Disease ◽  
Economic Losses ◽  
Control Mechanisms

Postharvest fungal disease is one of the significant factors that limits the storage period and marketing life of peaches, and even result in serious economic losses worldwide. Biological control using microbial antagonists has been explored as an alternative approach for the management of postharvest disease of fruits. However, there is little information available regarding to the identification the fungal pathogen species that cause the postharvest peach diseases and the potential and mechanisms of using the Bacillus subtilis JK-14 to control postharvest peach diseases. In the present study, a total of six fungal isolates were isolated from peach fruits, and the isolates of Alternaria tenuis and Botrytis cinerea exhibited the highest pathogenicity and virulence on the host of mature peaches. In the culture plates, the strain of B. subtilis JK-14 showed the significant antagonistic activity against the growth of A. tenuis and B. cinerea with the inhibitory rates of 81.32% and 83.45% at 5 days after incubation, respectively. Peach fruits treated with different formulations of B. subtilis JK-14 significantly reduced the mean disease incidences and lesion diameters of A. tenuis and B. cinerea. The greatest mean percent reduction of the disease incidences (81.99% and 71.34%) and lesion diameters (82.80% and 73.57%) of A. tenuis and B. cinerea were obtained at the concentration of 1 × 107 CFU mL−1 (colony forming unit, CFU). Treatment with the strain of B. subtilis JK-14 effectively enhanced the activity of the antioxidant enzymes-superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT) in A. tenuis and B. cinerea inoculated peach fruits. As such, the average activities of SOD, POD and CAT were increased by 36.56%, 17.63% and 20.35%, respectively, compared to the sterile water treatment. Our results indicate that the isolates of A. tenuis and B. cinerea are the main pathogens that cause the postharvest peach diseases, and the strain of B. subtilis JK-14 can be considered as an environmentally-safe biological control agent for the management of postharvest fruits diseases. We propose the possible mechanisms of the strain of B. subtilis JK-14 in controlling of postharvest peach diseases.

scholarly journals Biosynthesis of Amino Acids in Xanthomonas oryzae pv. oryzae Is Essential to Its Pathogenicity

2019 ◽  
Vol 7 (12) ◽  
pp. 693 ◽  
Author(s):  
Ting Li ◽  
Zhaohong Zhan ◽  
Yunuan Lin ◽  
Maojuan Lin ◽  
Qingbiao Xie ◽  
...  
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Bacterial Growth ◽  
Acid Synthesis ◽  
Xanthomonas Oryzae ◽  
Host Responses ◽  
Amino Acid Synthesis ◽  
Rice Bacterial Blight ◽  
Nutrient Environment ◽  
Blight Disease

Xanthomonas oryzae pv. oryzae (Xoo) is the causal agent of rice bacterial blight disease, which causes a large reduction in rice production. The successful interaction of pathogens and plants requires a particular nutrient environment that allows pathogen growth and the initiation of both pathogen and host responses. Amino acid synthesis is essential for bacterial growth when bacteria encounter amino acid-deficient environments, but the effects of amino acid synthesis on Xoo pathogenicity are unclear. Here, we systemically deleted the essential genes (leuB, leuC, leuD, ilvC, thrC, hisD, trpC, argH, metB, and aspC) involved in the synthesis of different amino acids and analyzed the effects of these mutations on Xoo virulence. Our results showed that leucine, isoleucine, valine, histidine, threonine, arginine, tryptophan, and cysteine syntheses are essential to Xoo infection. We further studied the role of leucine in the interaction between pathogens and hosts and found that leucine could stimulate some virulence-related responses and regulate Xoo pathogenicity. Our findings highlight that amino acids not only act as nutrients for bacterial growth but also play essential roles in the Xoo and rice interaction.

Biological control of rice bacterial blight by Lysobacter antibioticus strain 13-1

2008 ◽  
Vol 45 (3) ◽  
pp. 288-296 ◽  
Author(s):  
Guang-Hai Ji ◽  
Lan-Fang Wei ◽  
Yue-Qiu He ◽  
Ya-Peng Wu ◽  
Xue-Hui Bai
Keyword(s):  
Biological Control ◽  
Bacterial Blight ◽  
Rice Bacterial Blight
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