scholarly journals Characterising Functional Venom Profiles of Anthozoans and Medusozoans within Their Ecological Context

Marine Drugs ◽  
2020 ◽  
Vol 18 (4) ◽  
pp. 202 ◽  
Author(s):  
Lauren M. Ashwood ◽  
Raymond S. Norton ◽  
Eivind A. B. Undheim ◽  
David A. Hurwood ◽  
Peter J. Prentis
Keyword(s):  
Tissue Expression ◽  
Spatial Distributions ◽  
Expression Data ◽  
Ecological Context ◽  
Sea Anemones ◽  
Current State ◽  
Venom Composition ◽  
Peptide Toxins ◽  
Temporal And Spatial ◽  
Pharmacological Screening

This review examines the current state of knowledge regarding toxins from anthozoans (sea anemones, coral, zoanthids, corallimorphs, sea pens and tube anemones). We provide an overview of venom from phylum Cnidaria and review the diversity of venom composition between the two major clades (Medusozoa and Anthozoa). We highlight that the functional and ecological context of venom has implications for the temporal and spatial expression of protein and peptide toxins within class Anthozoa. Understanding the nuances in the regulation of venom arsenals has been made possible by recent advances in analytical technologies that allow characterisation of the spatial distributions of toxins. Furthermore, anthozoans are unique in that ecological roles can be assigned using tissue expression data, thereby circumventing some of the challenges related to pharmacological screening.

scholarly journals In vivo interactome profiling by enzyme‐catalyzed proximity labeling

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Yangfan Xu ◽  
Xianqun Fan ◽  
Yang Hu
Keyword(s):  
State Of The Art ◽  
Catalytic Efficiency ◽  
Biological Processes ◽  
Protein Protein Interaction ◽  
Current State ◽  
Protein Interactome ◽  
Potential Applications ◽  
Protein Protein Interaction Networks ◽  
Temporal And Spatial

AbstractEnzyme-catalyzed proximity labeling (PL) combined with mass spectrometry (MS) has emerged as a revolutionary approach to reveal the protein-protein interaction networks, dissect complex biological processes, and characterize the subcellular proteome in a more physiological setting than before. The enzymatic tags are being upgraded to improve temporal and spatial resolution and obtain faster catalytic dynamics and higher catalytic efficiency. In vivo application of PL integrated with other state of the art techniques has recently been adapted in live animals and plants, allowing questions to be addressed that were previously inaccessible. It is timely to summarize the current state of PL-dependent interactome studies and their potential applications. We will focus on in vivo uses of newer versions of PL and highlight critical considerations for successful in vivo PL experiments that will provide novel insights into the protein interactome in the context of human diseases.

scholarly journals Tentacle Morphological Variation Coincides with Differential Expression of Toxins in Sea Anemones

Toxins ◽  
2021 ◽  
Vol 13 (7) ◽  
pp. 452
Author(s):  
Lauren M. Ashwood ◽  
Michela L. Mitchell ◽  
Bruno Madio ◽  
David A. Hurwood ◽  
Glenn F. King ◽  
...  
Keyword(s):  
Differential Expression ◽  
Morphological Variation ◽  
Expression Profiles ◽  
The Body ◽  
Sea Anemones ◽  
Tissue Specific ◽  
Venom Composition ◽  
Specific Manner ◽  
Branched Structures ◽  
Morphological Variants

Phylum Cnidaria is an ancient venomous group defined by the presence of cnidae, specialised organelles that serve as venom delivery systems. The distribution of cnidae across the body plan is linked to regionalisation of venom production, with tissue-specific venom composition observed in multiple actiniarian species. In this study, we assess whether morphological variants of tentacles are associated with distinct toxin expression profiles and investigate the functional significance of specialised tentacular structures. Using five sea anemone species, we analysed differential expression of toxin-like transcripts and found that expression levels differ significantly across tentacular structures when substantial morphological variation is present. Therefore, the differential expression of toxin genes is associated with morphological variation of tentacular structures in a tissue-specific manner. Furthermore, the unique toxin profile of spherical tentacular structures in families Aliciidae and Thalassianthidae indicate that vesicles and nematospheres may function to protect branched structures that host a large number of photosynthetic symbionts. Thus, hosting zooxanthellae may account for the tentacle-specific toxin expression profiles observed in the current study. Overall, specialised tentacular structures serve unique ecological roles and, in order to fulfil their functions, they possess distinct venom cocktails.

scholarly journals Temporal and spatial distributions of animal and human rabies cases during 2012 and 2018, in Tunisia

2021 ◽  
Author(s):  
Sana Kalthoum ◽  
Kaouther Guesmi ◽  
Raja Gharbi ◽  
Mohamed Naceur Baccar ◽  
Chedia Seghaier ◽  
...  
Keyword(s):  
Human Rabies ◽  
Spatial Distributions ◽  
Temporal And Spatial

scholarly journals The current state of electrocorticography-based brain–computer interfaces

2020 ◽  
Vol 49 (1) ◽  
pp. E2 ◽  
Author(s):  
Kai J. Miller ◽  
Dora Hermes ◽  
Nathan P. Staff
Keyword(s):  
Functional Limitations ◽  
Brain Computer Interfaces ◽  
Brain Surface ◽  
Computer Interfaces ◽  
Brain Signals ◽  
Current State ◽  
Temporal And Spatial ◽  
Direct Feedback ◽  
The Brain ◽  
Lateral Sclerosis

Brain–computer interfaces (BCIs) provide a way for the brain to interface directly with a computer. Many different brain signals can be used to control a device, varying in ease of recording, reliability, stability, temporal and spatial resolution, and noise. Electrocorticography (ECoG) electrodes provide a highly reliable signal from the human brain surface, and these signals have been used to decode movements, vision, and speech. ECoG-based BCIs are being developed to provide increased options for treatment and assistive devices for patients who have functional limitations. Decoding ECoG signals in real time provides direct feedback to the patient and can be used to control a cursor on a computer or an exoskeleton. In this review, the authors describe the current state of ECoG-based BCIs that are approaching clinical viability for restoring lost communication and motor function in patients with amyotrophic lateral sclerosis or tetraplegia. These studies provide a proof of principle and the possibility that ECoG-based BCI technology may also be useful in the future for assisting in the cortical rehabilitation of patients who have suffered a stroke.

The SLC9A-C Mammalian Na+/H+Exchanger Family: Molecules, Mechanisms, and Physiology

2019 ◽  
Vol 99 (4) ◽  
pp. 2015-2113 ◽  
Author(s):  
S. F. Pedersen ◽  
L. Counillon
Keyword(s):  
State Of The Art ◽  
Expression Profiles ◽  
Tissue Expression ◽  
Gene Organization ◽  
Core Knowledge ◽  
Current State ◽  
Organ Systems ◽  
Evolutionarily Conserved ◽  
Solute Carrier ◽  
Art Research

Na+/H+exchangers play pivotal roles in the control of cell and tissue pH by mediating the electroneutral exchange of Na+and H+across cellular membranes. They belong to an ancient family of highly evolutionarily conserved proteins, and they play essential physiological roles in all phyla. In this review, we focus on the mammalian Na+/H+exchangers (NHEs), the solute carrier (SLC) 9 family. This family of electroneutral transporters constitutes three branches: SLC9A, -B, and -C. Within these, each isoform exhibits distinct tissue expression profiles, regulation, and physiological roles. Some of these transporters are highly studied, with hundreds of original articles, and some are still only rudimentarily understood. In this review, we present and discuss the pioneering original work as well as the current state-of-the-art research on mammalian NHEs. We aim to provide the reader with a comprehensive view of core knowledge and recent insights into each family member, from gene organization over protein structure and regulation to physiological and pathophysiological roles. Particular attention is given to the integrated physiology of NHEs in the main organ systems. We provide several novel analyses and useful overviews, and we pinpoint main remaining enigmas, which we hope will inspire novel research on these highly versatile proteins.

scholarly journals Investigating Serum and Tissue Expression Identified a Cytokine/Chemokine Signature as a Highly Effective Melanoma Marker

Cancers ◽  
2020 ◽  
Vol 12 (12) ◽  
pp. 3680
Author(s):  
Marco Cesati ◽  
Francesca Scatozza ◽  
Daniela D’Arcangelo ◽  
Gian Carlo Antonini-Cappellini ◽  
Stefania Rossi ◽  
...  
Keyword(s):  
Single Molecule ◽  
Learning Algorithm ◽  
Profile Analysis ◽  
Pearson Correlation ◽  
Tissue Expression ◽  
Support Vector ◽  
Expression Data ◽  
Serum Samples ◽  
Tissue Samples ◽  
Mortality And Morbidity

The identification of reliable and quantitative melanoma biomarkers may help an early diagnosis and may directly affect melanoma mortality and morbidity. The aim of the present study was to identify effective biomarkers by investigating the expression of 27 cytokines/chemokines in melanoma compared to healthy controls, both in serum and in tissue samples. Serum samples were from 232 patients recruited at the IDI-IRCCS hospital. Expression was quantified by xMAP technology, on 27 cytokines/chemokines, compared to the control sera. RNA expression data of the same 27 molecules were obtained from 511 melanoma- and healthy-tissue samples, from the GENT2 database. Statistical analysis involved a 3-step approach: analysis of the single-molecules by Mann–Whitney analysis; analysis of paired-molecules by Pearson correlation; and profile analysis by the machine learning algorithm Support Vector Machine (SVM). Single-molecule analysis of serum expression identified IL-1b, IL-6, IP-10, PDGF-BB, and RANTES differently expressed in melanoma (p < 0.05). Expression of IL-8, GM-CSF, MCP-1, and TNF-α was found to be significantly correlated with Breslow thickness. Eotaxin and MCP-1 were found differentially expressed in male vs. female patients. Tissue expression analysis identified very effective marker/predictor genes, namely, IL-1Ra, IL-7, MIP-1a, and MIP-1b, with individual AUC values of 0.88, 0.86, 0.93, 0.87, respectively. SVM analysis of the tissue expression data identified the combination of these four molecules as the most effective signature to discriminate melanoma patients (AUC = 0.98). Validation, using the GEPIA2 database on an additional 1019 independent samples, fully confirmed these observations. The present study demonstrates, for the first time, that the IL-1Ra, IL-7, MIP-1a, and MIP-1b gene signature discriminates melanoma from control tissues with extremely high efficacy. We therefore propose this 4-molecule combination as an effective melanoma marker.

Growth and reproduction of Halicarcinus australis (Haswell) (Crustacea, Brachyura) in the Swan estuary, Western Australia. II. Larval stages

1970 ◽  
Vol 21 (2) ◽  
pp. 163 ◽  
Author(s):  
JS Lucas ◽  
EP Hodgkin
Keyword(s):  
Larval Development ◽  
Larval Stage ◽  
Spatial Distributions ◽  
Laboratory Rearing ◽  
Larval Stages ◽  
Third Stage ◽  
Temperature Ranges ◽  
Causes Of Mortality ◽  
Temporal And Spatial ◽  
Growth And Reproduction

Larvae of Halicarcinus australis (Haswell) were collected in vertical plankton samples from eight stations in the Swan estuary during two summers. The majority of samples included live and dead larvae; the high proportion of dead larvae shows that there are other important causes of mortality besides predation. Third stage zoeae (the final larval stage) occur over more restricted salinity and temperature ranges than earlier zoeal stages, and their temporal and spatial distributions in the estuary are also more restricted. Laboratory rearing of H. australis larvae at 16 chlorinity-temperature combinations shows that larvae are less tolerant of extremes of these parameters than crabs. Hydrological conditions unfavourable for larval development occur throughout the estuary in winter and in upstream regions in summer. However, during much of these periods ovigerous females are present in crab populations and larvae are released, thus accounting for some of the mortality apparent from the plankton samples. Third stage zoeae are found progressively further up stream in summer associated with the advance of favourable salinities and with a zone of plankton abundance. Recruitment into crab populations reflects the time of completion of larval development at each locality.

Sign in / Sign up

Export Citation Format

Share Document