scholarly journals Arabidopsis thaliana Plant Natriuretic Peptide Active Domain Forms Amyloid-like Fibrils in a pH-Dependent Manner

Plants ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 9
Author(s):  
Georgia I. Nasi ◽  
Foteini D. Aktypi ◽  
Panagiotis M. Spatharas ◽  
Nikolaos N. Louros ◽  
Paraskevi L. Tsiolaki ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Amyloid Fibrils ◽  
Dependent Manner ◽  
Amyloidogenic Proteins ◽  
Transmission Electron ◽  
Ft Ir ◽  
Ph Conditions ◽  
Ph Dependent ◽  
Ft Ir Spectroscopy

Plant natriuretic peptides (PNPs) are hormones that have been extracted from many different species, with the Arabidopsis thaliana PNP (AtPNP-A) being the most studied among them. AtPNP-A is a signaling molecule that consists of 130 residues and is secreted into the apoplast, under conditions of biotic or abiotic stress. AtPNP-A has distant sequence homology with human ANP, a protein that forms amyloid fibrils in vivo. In this work, we investigated the amyloidogenic properties of a 34-residue-long peptide, located within the AtPNP-A sequence, in three different pH conditions, using transmission electron microscopy, X-ray fiber diffraction, ATR FT-IR spectroscopy, Congo red and Thioflavin T staining assays. We also utilize bioinformatics tools to study its association with known plant amyloidogenic proteins and other A. thaliana proteins. Our results reveal a new case of a pH-dependent amyloid forming peptide in A. thaliana, with a potential functional role.

scholarly journals The Application of Reversible Intramolecular Sulfonamide Ligation to Modulate Reactivity in Organometallic Ruthenium(II) Diamine Complexes

Molecules ◽  
2020 ◽  
Vol 25 (2) ◽  
pp. 244
Author(s):  
Samuel A. Kemp ◽  
Timothy J. Prior ◽  
Huguette Savoie ◽  
Ross W. Boyle ◽  
Benjamin S. Murray
Keyword(s):  
Healthy Tissue ◽  
Central Metal Atom ◽  
Dependent Manner ◽  
Central Metal ◽  
Coordination Environment ◽  
Typical Cell ◽  
Arene Ligand ◽  
Ph Conditions ◽  
Ph Dependent

Metallation of biomacromolecular species forms the basis for the anticancer activity of many metallodrugs. A major limitation of these compounds is that their reactivity is indiscriminate and can, in principle, occur in healthy tissue as well as cancerous tissue, potentially leading to side effects in vivo. Here we present pH-dependent intramolecular coordination of an arene-tethered sulfonamide functionality in organometallic ruthenium(II) ethylenediamine complexes as a route to controlling the coordination environment about the central metal atom. Through variation of the sulfonamide R group and the length of the tether linking it to the arene ligand the acidity of the sulfonamide NH group, and hence the pH-region over which regulation of metal coordination occurs, can be modulated. Intramolecular sulfonamide ligation controlled the reactivity of complex 4 within the physiologically relevant pH-region, rendering it more reactive towards 5ʹ-GMP in mildly acidic pH-conditions typical of tumour tissue compared to the mildly alkaline pH-conditions typical of healthy tissue. However, the activation of 4 by ring-opening of the chelate was found to be a slow process relative to the timescale of typical cell culture assays and members of this series of complexes were found not to be cytotoxic towards the HT-29 cell line. These complexes provide the basis for the development of analogues of increased potency where intramolecular sulfonamide ligation regulates reactivity and therefore cytotoxicity in a pH-dependent, and potentially, tissue-dependent manner.

Contribution of ATR/FT-IR Spectroscopy for Studying the in vivo Behavior of Octylmethoxycinnamate (OMC) after Topical Application

2001 ◽  
Vol 55 (9) ◽  
pp. 1173-1180 ◽  
Author(s):  
C. Laugel ◽  
C. Do Nascimento ◽  
D. Ferrier ◽  
J. P. Marty ◽  
A. Baillet
Keyword(s):  
Ir Spectroscopy ◽  
Topical Application ◽  
Ft Ir ◽  
Ft Ir Spectroscopy

Formation of Sic, Si3N4 and SiO2 by High-Dose Ion Implantation and Laser Annealing

1980 ◽  
Vol 1 ◽  
Author(s):  
S.W. Chiang ◽  
Y.S. Liu ◽  
R.F. Reihl
Keyword(s):  
Ion Implantation ◽  
Polycrystalline Silicon ◽  
Laser Annealing ◽  
Pulsed Laser ◽  
High Dose ◽  
Pulsed Laser Annealing ◽  
Transmission Electron ◽  
A Cell ◽  
Ft Ir ◽  
Ft Ir Spectroscopy

ABSTRACTHigh-dose ion implantation (1017 ions-cm−2) of C+, N+, and O+ at 50 KeV into silicon followed by pulsed laser annealing at 1.06 μm was studied. Formation of SiC, Si3N4, and SiO2 has been observed and investigated using Transmission Electron Microscopy (TEM) and Differential Fourier-Transform Infrared (FT-IR) Spectroscopy. Furthermore, in N+-implanted and laser-annealed silicon samples, we have observed a cell-like structure which has been identified to be spheroidal polycrystalline silicon formed by the rapid laser irradiation.

Study on Nano- and Microcrystallites in Urines of Uric Acid Stone Patients

2013 ◽  
Vol 655-657 ◽  
pp. 1927-1930 ◽  
Author(s):  
Guang Na Zhang ◽  
Zhi Yue Xia ◽  
Jian Ming Ouyang ◽  
Li Kuan
Keyword(s):  
Electron Microscopy ◽  
Uric Acid ◽  
X Ray Diffraction ◽  
Uric Acid Stone ◽  
Urine Ph ◽  
Stone Formers ◽  
Transmission Electron ◽  
Close Relationship ◽  
Ft Ir ◽  
Ft Ir Spectroscopy

The presence of crystallites in urine is closely related to stones formation. In this article, the components, morphology of nano- and micro-crystallites in urines of 20 uric acid (UA) stone formers as well as their relationship with the formation of UAstones were comparatively studied using X-ray diffraction (XRD), Fourier transform infrared (FT-IR) spectroscopy, scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The main constituent of urinary crystallites was uric acid. Their particle size distribution was highly uneven, ranging from several nanometers to several tens of micrometers, and obvious aggregation was observed. These results showed that there was close relationship among stone components, urinary crystallites composition and urine pH.

scholarly journals Synthesis, Characterization, and Optimization of Green Silver Nanoparticles Using Neopestalotiopsis clavispora and Evaluation of Its Antibacterial, Antibiofilm, and Genotoxic Effects

2021 ◽  
Vol 5 (3) ◽  
pp. 109-122
Author(s):  
Tuğba Kahraman ◽  
Safiye Elif Korcan ◽  
Recep Liman ◽  
İbrahim Hakkı Ciğerci ◽  
Yaser Acikbas ◽  
...  
Keyword(s):  
Silver Nanoparticles ◽  
Nuclear Ribosomal Dna ◽  
Diffusion Method ◽  
Dependent Manner ◽  
Transmission Electron ◽  
Infrared Spectrophotometer ◽  
Average Size ◽  
Novel Applications ◽  
Dose Dependent

Abstract Silver nanoparticles (AgNPs) have been used in a variety of biomedical applications in the last two decades, including antimicrobial, anti-inflammatory, and anticancer treatments. The present study highlights the extracellular synthesis of silver nanoparticles AgNPs using Neopestalotiopsis clavispora MH244410.1 and its antibacterial, antibiofilm, and genotoxic properties. Locally isolated N. clavispora MH244410.1 was identified by Internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA. Optimization of synthesized AgNPs was performed by using various parameters (pH (2, 4, 7, 9 and 12), temperature (25, 35 and 45 °C), and substrate concentration (0.05, 0.1, 0.15, 0.2 and 0.25 mM)). After 72 hours of incubation in dark conditions, the best condition for the biosynthesis of AgNPs was determined as 0.25 mM metal concentration at pH 12 and 35 °C. Fungal synthesized AgNPs were characterized via spectroscopic and microscopic techniques such as Fouirer Transform Infrared Spectrophotometer (FTIR), UV-Visible Spectroscopy, and Transmission Electron Microscopy (TEM). The average size of the AgNPs was determined less than 60 nm using the TEM and Zetasizer measurement system (measured in purity water suspension). The characteristic peak of AgNPs was observed at ~414 nm from UV-Vis results. Antibacterial and genotoxic activity of synthesized AgNPs (0.1, 1, and 10 ppm) were also determined by using the agar well diffusion method and in vivo Somatic Mutation and Recombination Test (SMART) in Drosophila melanogaster. AgNPs exhibited potential antimicrobial activity against all the tested bacteria (Bacillus subtilis, Staphylococcus aureus, and Pseudomonas aeruginosa) except Escherichia coli in a dose-dependent manner. AgNPs did not induce genotoxicity in the Drosophila SMART assay. 79.33, 65.47, and 41.95% inhibition of biofilms formed by P. aeruginosa were observed at 10, 1, and 0.1 ppm of AgNPs, respectively. The overall results indicate that N. clavispora MH244410.1 is a good candidate for novel applications in biomedical research.

scholarly journals An Efficient and Novel Ammonia Sensor Based on Polypyrrole/Tin Oxide/MWCNT Nanocomposite

2020 ◽  
Vol 32 (6) ◽  
pp. 1505-1510
Author(s):  
Ahmad Husain ◽  
Mohd Urooj Shariq ◽  
Anees Ahmad
Keyword(s):  
Electron Microscopy ◽  
Tin Oxide ◽  
Charge Carriers ◽  
Morphological Properties ◽  
X Ray Diffraction ◽  
Ammonia Sensing ◽  
Transmission Electron ◽  
Ft Ir ◽  
Ft Ir Spectroscopy

In present study, the synthesis and characterization of a novel polypyrrole (PPy)/tin oxide (SnO2)/MWCNT nanocomposite along with pristine polypyrrole is reported. These materials have been studied for their structural and morphological properties by FT-IR spectroscopy, X-ray diffraction (XRD), scanning electron microscopy (SEM) and transmission electron microscopy (TEM) techniques. PPy/SnO2/MWCNT nanocomposite has been converted into a pellet-shaped sensor, and its ammonia sensing studies were carried out by calculating the variation in the DC electrical conductivity at different concentration of ammonia ranging from 10 to 1500 ppm. The sensing response of the sensor was determined at 1500, 1000, 500, 200, 100 and 10 ppm and found to be 70.4, 66.1, 62.2, 55.4, 50.8 and 39.7%, respectively The sensor showed a complete reversibility at lower concentrations along with excellent selectivity and stability. Finally, a sensing mechanism was also proposed involving polarons (charge carriers) of polypyrrole and lone pairs of ammonia molecules

scholarly journals In Situ IR Characterization of CO Interacting with Rh Nanoparticles Obtained by Calcination and Reduction of Hydrotalcite-Type Precursors

2011 ◽  
Vol 2011 ◽  
pp. 1-8 ◽  
Author(s):  
F. Basile ◽  
I. Bersani ◽  
P. Del Gallo ◽  
S. Fiorilli ◽  
G. Fornasari ◽  
...  
Keyword(s):  
Crystal Size ◽  
Liquid Nitrogen Temperature ◽  
Transmission Electron ◽  
In Situ Ir ◽  
Ft Ir ◽  
Co Disproportionation ◽  
Ft Ir Spectroscopy

Supported Rh nanoparticles obtained by reduction in hydrogen of severely calcined Rh/Mg/Al hydrotalcite-type (HT) phases have been characterized by FT-IR spectroscopy of adsorbed CO [both at room temperature (r.t.) and nominal liquid nitrogen temperature] and Transmission Electron Microscopy (TEM). The effect of reducing temperature has been investigated, showing that Rh crystal size increases from 1.4 nm to 1.8 nm when the reduction temperature increases from 750°C to 950°C. The crystal growth favours the formation of bridged CO species and linear monocarbonyl species with respect to gem-dicarbonyl species; when CO adsorbs at r.t., CO disproportionation occurs on Rh and it accompanies the formation of RhI(CO)2. The role of interlayer anions in the HT precursors to affect the properties of the final materials has been also investigated considering samples prepared from silicate-instead of carbonate-containing precursors. In this case, formation of RhI(CO)2 and CO disproportionation do not occur, and this evidence is discussed in terms of support effect.

Synthesis of Fe 3+-Dopped PANI Conductive Nanomaterials via Interfacial Polymerization

2011 ◽  
Vol 239-242 ◽  
pp. 2839-2842
Author(s):  
Hong Mei Mu ◽  
Peng Fei ◽  
Bi Tao Su ◽  
Zi Qiang Lei
Keyword(s):  
Electron Microscopy ◽  
Transmission Electron Microscopy ◽  
Fourier Transform ◽  
Ir Spectroscopy ◽  
Interfacial Polymerization ◽  
X Ray ◽  
Transmission Electron ◽  
Ft Ir ◽  
Conductive Nanomaterials ◽  
Ft Ir Spectroscopy

A series of Fe3+-dopped polyaniline (Fe3+/PANI) nanomaterials with different morphologies and a higher conductivity were successfully synthesized using a simple and static interfacial polymerization by using FeCl3 as both oxidant catalyst and dopant. The effect of surfactants CTAB and SDS and the concentration of FeCl3 on the morphology and conductivity of Fe3+/PANI nanomaterial were investigated. The samples were characterized by Transmission Electron Microscopy (TEM), SDY-4 probes conductivity meter, X-ray Diffractometry (XRD), Energy dispersive spectroscopy (EDS) and Fourier transform infrared (FT-IR) spectroscopy techniques. TEM’s results showed that their morphologies changed with the type of the surfactant and the concentration of FeCl3. Introducing surfactants CTAB and SDS into Fe3+/PANI remarkably improved the conductivity of the material. The conductivities of CTAB/Fe3+/PANI and SDS /Fe3+/PANI nanomaterials were respectively about 4.8×10-2 and 1.3×10-2 S/cm while the conductivity of Fe3+/PANI was found to be 1.5×10-4 S/cm. The different morphology and high conductivity may be ascribed to the mutual effects of the surfactant and oxidant.

Synthesis and Characterization of HgSe Nanostructure Using a Novel Precursor

2013 ◽  
Vol 32 (2) ◽  
pp. 157-162 ◽  
Author(s):  
Mahdiyeh Esmaeili-Zare ◽  
Masoud Salavati-Niasari ◽  
Davood Ghanbari
Keyword(s):  
Electron Microscopy ◽  
Synthesis And Characterization ◽  
Sonochemical Method ◽  
X Ray Diffraction ◽  
X Ray ◽  
Transmission Electron ◽  
Mercury Selenide ◽  
Ft Ir ◽  
Ft Ir Spectroscopy

AbstractMercury selenide nanostructures were synthesized from the reaction of N, N′-bis(salicylidene)propane-1,3-diamine mercury complex, (Hg(Salpn)) as a novel precursor, via sonochemical method. The effect of different surfactant on the morphology and particle size of the products was investigated. Products were characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), Fourier transform infrared (FT-IR) spectroscopy and X-ray energy dispersive spectroscopy (EDS).

scholarly journals Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

2020 ◽  
Author(s):  
Hui Zhi ◽  
Judith Behnsen ◽  
Allegra Aron ◽  
Vivekanandan Subramanian ◽  
Janet Z. Liu ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Local Environment ◽  
Probiotic Bacterium ◽  
Zinc Transporters ◽  
Bacterial Metabolism ◽  
Dependent Manner ◽  
Metal Affinity ◽  
Ph Dependent

ABSTRACTZinc is an essential cofactor for bacterial metabolism, and many Enterobacteriaceae express the zinc transporters ZnuABC and ZupT to acquire this metal in the host. Unexpectedly, the probiotic bacterium Escherichia coli Nissle 1917 exhibited appreciable growth in zinc-limited media even when these transporters were deleted. By utilizing in vitro and in vivo studies, as well as native spray metal infusion mass spectrometry and ion identity molecular networking, we discovered that Nissle utilizes yersiniabactin as a zincophore. Indeed, yersiniabactin enables Nissle to scavenge zinc in zinc-limited media, to resist calprotectin-mediated zinc sequestration, and to thrive in the inflamed gut. Moreover, we discovered that yersiniabactin’s affinity for iron or zinc changes in a pH-dependent manner, with higher affinity for zinc as the pH increased. Altogether, we demonstrate that siderophore metal affinity can be influenced by the local environment and reveal a mechanism of zinc acquisition available to many commensal and pathogenic Enterobacteriaceae.

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