daily rhythms
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BMC Genomics ◽  
2022 ◽  
Vol 23 (1) ◽  
Author(s):  
Biplabendu Das ◽  
Charissa de Bekker

Abstract Background Circadian clocks allow organisms to anticipate daily fluctuations in their environment by driving rhythms in physiology and behavior. Inter-organismal differences in daily rhythms, called chronotypes, exist and can shift with age. In ants, age, caste-related behavior and chronotype appear to be linked. Brood-tending nurse ants are usually younger individuals and show “around-the-clock” activity. With age or in the absence of brood, nurses transition into foraging ants that show daily rhythms in activity. Ants can adaptively shift between these behavioral castes and caste-associated chronotypes depending on social context. We investigated how changes in daily gene expression could be contributing to such behavioral plasticity in Camponotus floridanus carpenter ants by combining time-course behavioral assays and RNA-Sequencing of forager and nurse brains. Results We found that nurse brains have three times fewer 24 h oscillating genes than foragers. However, several hundred genes that oscillated every 24 h in forager brains showed robust 8 h oscillations in nurses, including the core clock genes Period and Shaggy. These differentially rhythmic genes consisted of several components of the circadian entrainment and output pathway, including genes said to be involved in regulating insect locomotory behavior. We also found that Vitellogenin, known to regulate division of labor in social insects, showed robust 24 h oscillations in nurse brains but not in foragers. Finally, we found significant overlap between genes differentially expressed between the two ant castes and genes that show ultradian rhythms in daily expression. Conclusion This study provides a first look at the chronobiological differences in gene expression between forager and nurse ant brains. This endeavor allowed us to identify a putative molecular mechanism underlying plastic timekeeping: several components of the ant circadian clock and its output can seemingly oscillate at different harmonics of the circadian rhythm. We propose that such chronobiological plasticity has evolved to allow for distinct regulatory networks that underlie behavioral castes, while supporting swift caste transitions in response to colony demands. Behavioral division of labor is common among social insects. The links between chronobiological and behavioral plasticity that we found in C. floridanus, thus, likely represent a more general phenomenon that warrants further investigation.


2021 ◽  
Vol 20 (6) ◽  
pp. 111-118
Author(s):  
Mikhail A. Bragin ◽  
Evgeny V. Goloborodko ◽  
Natalya V. Kotenko ◽  
Alexander S. Samoylov ◽  
Maria Yu. Kalinina

Aim. To determine the effectiveness of hardware and software complexes in assessing the psychophysiological state of persons in extreme conditions professions. Material and methods. The post-hoc comparative analysis of sensitivity, specificity, and overall accuracy of five hardware and software complexes was performed involving 459 patients of different medical and preventive care institutions that received the rehabilitation medical care. The simulation of altered reactivity in 6 athletes of cyclic kinds of sport was carried out within a daily experiment (5 men, mean age 21.1±0.7 years and one woman, 22 years; sport rank not lower than 1 senior degree). Psychophysiological testing was conducted at five time points using the following methods: hardware and software complex “Diamed-MBS”, ASD (Radix), Lusher colorchoice test (Radix), reaction to a moving object (Multipsychometer), static and dynamic tremorometry (Multipsychometer). Results and discussion. The diagnostic effectiveness of these psychophysiological examination data automated processing complexes were determined by their informative value, the ability to recognize signs of the disease with a so-called reference or benchmark diagnosis. The highest indicators of sensitivity (82.5%), specificity (79.3%) and overall accuracy (80.6%) were found in the Diamed-MBS hardware and software complex. A tendency to decrease in the main indicators, such as heart rate, stress index, activity, well-being, working capacity with a minimum at 3:00-5:00 hours, was revealed. During the day, the possibility of the athletes’ psycho-emotionalstate dynamic assessment during the day (somatic and psychological components) was evaluated according to the parameters of heart rate variability, electrosomatography and bioelectrography. The dynamics of psychological and psychophysiological diagnostics indicators was of the multidirectional nature, which does not allow us to assert unequivocally about the negative impact of daily rhythms on the condition of athletes. All athletes showed negative results in one way or another at different intermediate diagnostic points, but by the end of the study they managed to compensate and reach the results of the primary diagnosis. Conclusion. The diagnostic efficiency of complex screening diagnostics when using hardware and software complex “Diamed-MBS” is 80.6%, which is 25-35% higher than the same parameter for similar devices. No negative psychological and psychophysiological effects of stress stimulation on daily rhythms of athletes were defined.


eLife ◽  
2021 ◽  
Vol 10 ◽  
Author(s):  
Marieke MB Hoekstra ◽  
Maxime Jan ◽  
Georgia Katsioudi ◽  
Yann Emmenegger ◽  
Paul Franken

In the mouse, Period-2 (Per2) expression in tissues peripheral to the suprachiasmatic nuclei (SCN) increases during sleep deprivation and at times of the day when animals are predominantly awake spontaneously, suggesting that the circadian sleep-wake distribution directly contributes to the daily rhythms in Per2. We found support for this hypothesis by recording sleep-wake state alongside PER2 bioluminescence in freely behaving mice, demonstrating that PER2 bioluminescence increases during spontaneous waking and decreases during sleep. The temporary reinstatement of PER2-bioluminescence rhythmicity in behaviorally arrhythmic SCN-lesioned mice submitted to daily recurring sleep deprivations substantiates our hypothesis. Mathematical modelling revealed that PER2 dynamics can be described by a damped harmonic oscillator driven by two forces: a sleep-wake-dependent force and a SCN-independent circadian force. Our work underscores the notion that in peripheral tissues the clock gene circuitry integrates sleep-wake information and could thereby contribute to behavioral adaptability to respond to homeostatic requirements.


2021 ◽  
Author(s):  
Kayla E. Rohr ◽  
Thomas Inda ◽  
Jennifer A. Evans

Circadian rhythms in behavior and physiology are programmed by the suprachiasmatic nucleus (SCN) of the hypothalamus. A subset of SCN neurons produce the neuropeptide arginine vasopressin (AVP), but it remains unclear whether AVP signaling influences the SCN clock directly. Here we test that AVP signaling acting through V1A and V1B receptors influences molecular rhythms in SCN neurons. V1 receptor agonists were applied ex vivo to PERIOD2::LUCIFERASE SCN slices, allowing for real-time monitoring of changes in molecular clock function. V1A/B agonists reset the phase of the SCN molecular clock in a time-dependent manner, with larger magnitude responses by the female SCN. Further, we find evidence that both Gq and Gs signaling pathways interact with V1A/B-induced SCN resetting, and that this response requires vasoactive intestinal polypeptide (VIP) signaling. Collectively, this work indicates that AVP signaling resets SCN molecular rhythms in conjunction with VIP signaling and in a manner influenced by sex. This highlights the utility of studying clock function in both sexes and suggests that signal integration in central clock circuits regulates emergent properties important for the control of daily rhythms in behavior and physiology.


BMC Biology ◽  
2021 ◽  
Vol 19 (1) ◽  
Author(s):  
Kate A. Rawlinson ◽  
Adam J. Reid ◽  
Zhigang Lu ◽  
Patrick Driguez ◽  
Anna Wawer ◽  
...  

Abstract Background The consequences of the earth’s daily rotation have led to 24-h biological rhythms in most organisms. Even some parasites are known to have daily rhythms, which, when in synchrony with host rhythms, can optimise their fitness. Understanding these rhythms may enable the development of control strategies that take advantage of rhythmic vulnerabilities. Recent work on protozoan parasites has revealed 24-h rhythms in gene expression, drug sensitivity and the presence of an intrinsic circadian clock; however, similar studies on metazoan parasites are lacking. To address this, we investigated if a metazoan parasite has daily molecular oscillations, whether they reveal how these longer-lived organisms can survive host daily cycles over a lifespan of many years and if animal circadian clock genes are present and rhythmic. We addressed these questions using the human blood fluke Schistosoma mansoni that lives in the vasculature for decades and causes the tropical disease schistosomiasis. Results Using round-the-clock transcriptomics of male and female adult worms collected from experimentally infected mice, we discovered that ~ 2% of its genes followed a daily pattern of expression. Rhythmic processes included a stress response during the host’s active phase and a ‘peak in metabolic activity’ during the host’s resting phase. Transcriptional profiles in the female reproductive system were mirrored by daily patterns in egg laying (eggs are the main drivers of the host pathology). Genes cycling with the highest amplitudes include predicted drug targets and a vaccine candidate. These 24-h rhythms may be driven by host rhythms and/or generated by a circadian clock; however, orthologs of core clock genes are missing and secondary clock genes show no 24-h rhythmicity. Conclusions There are daily rhythms in the transcriptomes of adult S. mansoni, but they appear less pronounced than in other organisms. The rhythms reveal temporally compartmentalised internal processes and host interactions relevant to within-host survival and between-host transmission. Our findings suggest that if these daily rhythms are generated by an intrinsic circadian clock then the oscillatory mechanism must be distinct from that in other animals. We have shown which transcripts oscillate at this temporal scale and this will benefit the development and delivery of treatments against schistosomiasis.


2021 ◽  
pp. 113666
Author(s):  
Carmel Bilu ◽  
Tal Frolinger-Ashkenazi ◽  
Haim Einat ◽  
Paul Zimmet ◽  
Yulia Bishko ◽  
...  
Keyword(s):  

Author(s):  
Estelle Grasset ◽  
Anthony Puel ◽  
Julie Charpentier ◽  
Pascale Klopp ◽  
Jeffrey E. Christensen ◽  
...  

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Jeff R. Jones ◽  
Sneha Chaturvedi ◽  
Daniel Granados-Fuentes ◽  
Erik D. Herzog

AbstractSignals from the central circadian pacemaker, the suprachiasmatic nucleus (SCN), must be decoded to generate daily rhythms in hormone release. Here, we hypothesized that the SCN entrains rhythms in the paraventricular nucleus (PVN) to time the daily release of corticosterone. In vivo recording revealed a critical circuit from SCN vasoactive intestinal peptide (SCNVIP)-producing neurons to PVN corticotropin-releasing hormone (PVNCRH)-producing neurons. PVNCRH neurons peak in clock gene expression around midday and in calcium activity about three hours later. Loss of the clock gene Bmal1 in CRH neurons results in arrhythmic PVNCRH calcium activity and dramatically reduces the amplitude and precision of daily corticosterone release. SCNVIP activation reduces (and inactivation increases) corticosterone release and PVNCRH calcium activity, and daily SCNVIP activation entrains PVN clock gene rhythms by inhibiting PVNCRH neurons. We conclude that daily corticosterone release depends on coordinated clock gene and neuronal activity rhythms in both SCNVIP and PVNCRH neurons.


2021 ◽  
Author(s):  
Michal Dudek ◽  
Dharshika Pathiranage ◽  
Catia F Goncalves ◽  
Craig Lawless ◽  
Dong Wang ◽  
...  

In mammals, temporally coordinated daily rhythms of behaviour and physiology are generated by a multi-oscillatory circadian system, entrained through cyclic environmental cues (e.g. light). Presence of niche-dependent physiological time cues has been proposed, which would allow local tissues flexibility of adopting a different phase relationship if circumstances require. Up till now, such tissue-unique stimuli have remained elusive. Here we show that cycles of mechanical loading and osmotic stimuli within physiological range drive rhythmic expression of clock genes and reset clock phase and amplitude in cartilage and intervertebral disc tissues. Hyperosmolarity (and not hypo-osmolarity) resets clocks in young and ageing skeletal tissues through mTORC2-AKT-GSK3β pathway, leading to genome-wide induction of rhythmic genes. These results suggest diurnal patterns of mechanical loading and consequent daily surges in extracellular osmolarity as a bona fide tissue niche-specific time cue to maintain skeletal circadian rhythms in sync.


2021 ◽  
pp. 074873042110312
Author(s):  
Rachel S. Herz ◽  
Erik D. Herzog ◽  
Martha Merrow ◽  
Sara B. Noya

Daily rhythms of behavior and neurophysiology are integral to the circadian clocks of all animals. Examples of circadian clock regulation in the human brain include daily rhythms in sleep-wake, cognitive function, olfactory sensitivity, and risk for ischemic stroke, all of which overlap with symptoms displayed by many COVID-19 patients. Motivated by the relatively unexplored, yet pervasive, overlap between circadian functions and COVID-19 neurological symptoms, this perspective piece uses daily variations in the sense of smell and the timing of sleep and wakefulness as illustrative examples. We propose that time-stamping clinical data and testing may expand and refine diagnosis and treatment of COVID-19.


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