Diversity of ectomycorrhizal fungi associated with Quercus petraea in the national park Fruška gora in the Republic of Serbia

Although sessile oak is one of the most important deciduous forest tree species in Europe, data on the diversity of ectomycorrhizal (ECM) fungi on sessile oaks in the Republic of Serbia are scarce. The aim of this study was to provide the first insight into the diversity of ECM fungi on sessile oak in Serbia. Two sites Info center and Brankovac, located in National Park Fruška gora were chosen. ECM fungi were identified combining morphological and anatomical characterization with molecular analysis of nuclear rDNA internal transcribed spacer (ITS) region. All vital ECM root tips were counted, diversity indices were calculated, and ECM fungi were classified into the exploration types. The granulometric and chemical composition of soil were analyzed as well. At both sites, 26 different ECM fungal taxa were recorded in total, 17 taxa were observed at the site Info center and 12 taxa at Brankovac. ECM communities consisted of a few abundant taxa and a larger number of rare taxa. Lactarius quietus, Cenococcum geophilum, and Tomentella sublilacina were recorded at both sites. High abundance of contact and short-distance exploration types recorded in studied stands suggests that soils are sufficiently rich in total nitrogen and organic matter. Values of diversity indices recorded in studied sessile oak stands from Fruška gora were lower in comparison to those obtained in stands of different oak species across Europe which is likely induced by drought. To get a more thorough insight into the diversity of ECM fungi on sessile oak, research should be continued at more sites and seasonal dynamics should be included.

Effects of Cenococcum Geophilum on the Growth of Seedlings Of Ostryopsis Davidiana Dence. And Pinus Tabuleaformis Carr.

The affinity and promoting ability of the Cenococcum geophilum strains (CgSO1, CgSB2, CgO5, SPOP2 and Cg5 #) to Ostryopsis davidiana and Pinus tabulaeformis were studied. The results showed that the tested strains formed ectomycorrhizae（ECM）with O. davidiana except the Cg5 # strain and the infection rates were 40-50%. CgSO1 and CgSPOP2 formed ECM with P. tabulaeformis and the infection rates were 10.3 and 12.4%, respectively. C. geophilum can promote the growth of the two host plant seedlings, especially for root growth. Results proved that the affinity of different strains to host plants and the affinity of the same strain to different host plants are different. Bangladesh J. Bot. 50(3): 679-683, 2021 (September)

Cryptic genetic structure and copy-number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum

Ectomycorrhizal (ECM) fungi associated with plants constitute one of the most successful symbiotic interactions in forest ecosystems. ECM support trophic exchanges with host plants and are important factors for the survival and stress resilience of trees. However, ECM clades often harbour morpho-species and cryptic lineages, with weak morphological differentiation. How this relates to intraspecific genome variability and ecological functioning is poorly known. Here, we analysed 16 European isolates of the ascomycete Cenococcum geophilum, an extremely ubiquitous forest symbiotic fungus with no known sexual or asexual spore forming structures but with a massively enlarged genome. We carried out whole-genome sequencing to identify single-nucleotide polymorphisms. We found no geographic structure at the European scale but divergent lineages within sampling sites. Evidence for recombination was restricted to specific cryptic lineages. Lineage differentiation was supported by extensive copy-number variation. Finally, we confirmed heterothallism with a single MAT1 idiomorph per genome. Synteny analyses of the MAT1 locus revealed substantial rearrangements and a pseudogene of the opposite MAT1 idiomorph. Our study provides the first evidence for substantial genome-wide structural variation, lineage-specific recombination and low continent-wide genetic differentiation in C. geophilum. Our study provides a foundation for targeted analyses of intra-specific functional variation in this major symbiosis.

The ectomycorrhizal community of urban linden trees in Gdańsk, Poland

The linden tree (Tilia spp.) is a popular tree for landscaping and urban environments in central and northwest European countries, and it is one of the most popular in cities in Poland. Ectomycorrhizal fungi form a symbiosis with many urban tree species and protect the host plant from heavy metals and against salinity. The aim of this study was to characterise the ECM fungal community of urban linden trees along the tree damage gradient. The study was performed on two sites located in the centre of the city of Gdańsk, in northern Poland. The vitality assessment of urban linden trees was made according to Roloff’s classification. Tree damage classes were related to soil characteristics using principal component analysis. The five ectomycorrhizal fungal species were shared among all four tree damage classes, and Cenococcum geophilum was found to be the most abundant and frequent ectomycorrhizal fungal species in each class. Soil samples collected in the vicinity of trees belonging to the R0 class had significantly lower pH Na, Cl and Pb content than other soils. Our knowledge of ectomycorrhizal communities in urban areas is still limited, and these findings provide new insights into ectomycorrhizal distribution patterns in urban areas.

Hongos ectomicorrízicos asociados a plantas jóvenes de Pinus patula y Quercus crassifolia en plantaciones del sistema matarrasa de la Sierra Juárez de Oaxaca, México

Antecedentes: Pinus patula es la especie forestal maderable más importante en la región subtropical de México. En el estado de Oaxaca, se encuentra en bosques sometidos a manejo y en plantaciones del sistema de aprovechamiento matarrasa. La interacción entre raíces y hongos ectomicorrízicos (EcM) afecta la nutrición y la sobrevivencia de Pinus y Quercus, con consecuencias para la dinámica de los bosques. Objetivo: Caracterizar a los hongos EcM más frecuentes en las raíces de plántulas de P. patula y Q. crassifolia (que crece por regeneración natural) en franjas del sistema silvícola matarrasa de la Sierra Juárez de Oaxaca. Métodos: Los morfotipos de cada punta de raíz EcM se describieron morfológicamente y se identificaron usando la región ITS del DNA ribosomal nuclear por similitud genética en la base de datos de UNITE. Resultados y conclusiones: Se encontraron un total de 14 “Species Hypothesis”, de las cuales los linajes /tomentella-thelephora y /laccaria tuvieron el mayor número de especies. Lactarius sp., Cenococcum geophilum y Tomentella radiosa fueron las especies con mayor frecuencia, en asociación con ambos hospederos. Ese trabajo destaca la diversidad de los hongos EcM en plantaciones del sistema matarrasa. Tal conocimiento podría utilizarse para posteriores investigaciones de aprovechamiento forestal sustentable.

Phylogenetic diversity of 200+ isolates of the ectomycorrhizal fungus Cenococcum geophilum associated with Populus trichocarpa soils in the Pacific Northwest, USA and comparison to globally distributed representatives

The ectomycorrhizal fungal symbiont Cenococcum geophilum is of high interest as it is globally distributed, associates with many plant species, and has resistance to multiple environmental stressors. C. geophilum is only known from asexual states but is often considered a cryptic species complex, since extreme phylogenetic divergence is often observed within nearly morphologically identical strains. Alternatively, C. geophilum may represent a highly diverse single species, which would suggest cryptic but frequent recombination. Here we describe a new isolate collection of 229 C. geophilum isolates from soils under Populus trichocarpa at 123 collection sites spanning a ~283 mile north-south transect in Western Washington and Oregon, USA (PNW). To further understanding of the phylogenetic relationships within C. geophilum, we performed maximum likelihood and Bayesian phylogenetic analyses to assess divergence within the PNW isolate collection, as well as a global phylogenetic analysis of 789 isolates with publicly available data from the United States, Japan, and European countries. Phylogenetic analyses of the PNW isolates revealed three distinct phylogenetic groups, with 15 clades that strongly resolved at >80% bootstrap support based on a GAPDH phylogeny and one clade segregating strongly in two principle component analyses. The abundance and representation of PNW isolate clades varied greatly across the North-South range, including a monophyletic group of isolates that spanned nearly the entire gradient at ~250 miles. A direct comparison between the GAPDH and ITS rRNA gene region phylogenies, combined with additional analyses revealed stark incongruence between the ITS and GAPDH gene regions, consistent with intra-species recombination between PNW isolates. In the global isolate collection phylogeny, 34 clades were strongly resolved using Maximum Likelihood and Bayesian approaches (at >80% MLBS and >0.90 BPP respectively), with some clades having intra- and intercontinental distributions. Together these data are highly suggestive of divergence within multiple cryptic species, however additional analyses such as higher resolution genotype-by-sequencing approaches are needed to distinguish potential species boundaries and the mode and tempo of recombination patterns.

The Ectomycorrhizal Community of Crimean Linden Trees in Warsaw, Poland

Urban trees provide many ecosystem services essential to city dwellers well-being. Ectomycorrhizal (ECM) fungi are symbionts for trees and may also contribute to urban tree health and thus maintenance of the ecosystem services. However, no studies so far have analysed the composition of the ECM community colonising Crimean linden. In this study we investigated ECM associations of Crimean linden trees in the urban environment, comparing street trees with those growing in a park. Moreover, we studied the ECM community of healthy versus unhealthy linden trees growing along a street. The health status of each tree was assessed using tree health indicators. The smallest degree ECM colonisation was observed in unhealthy street trees (40.5%). Cenococcum geophilum was found to be the most abundant ECM fungal species of the Crimean linden growing in the park (23.9%). Our results suggest that the linden trees growing in the park and those growing along the street but without disease symptoms did not differ in their ECM richness. However, the unhealthy street trees showed less ECM diversity and abundance. Moreover, strong negative correlations between the concentrations of Na and Cl in the soil and ECM colonisation were found. This study describes, for the first time, the ECM fungal community on Tilia “Euchlora” trees grown in Europe. We report novel findings on the ECM associations of Crimean linden trees in an urban ecosystem. Further research should focus on the role of native mycorrhizal fungal communities in nutrient acquisition by urban trees in the presence of salt stress.