A Non-destructive Method to Create a Time Series of Surface Area for Coral Using 3D Photogrammetry

The wax dip method typically used to determine the surface area of corals for data normalization is destructive, rendering the collection of time series for such data impossible. With recent advancements in photogrammetric technology, it is now possible to collect these data in a non-destructive manner at very high levels of accuracy. This photogrammetric method using Agisoft’s Metashape is compared to the standard wax-dip method using both objects of known surface area and objects of unknown surface area. Objects of known surface area (i.e., objects that have surface areas that can be calculated using geometrical formulas) were estimated with a similar degree of accuracy with the Photogrammetry (PG) method (R2 = 0.9922, slope = 0.9835) as with the wax-dip method (R2 = 0.9872, slope = 1). A single factor ANOVA confirmed that there was no significant difference between measurements from the three methods of geometrical calculation, wax dipping, or photogrammetry for objects of known surface area. This paper describes the methods for rapidly collecting surface area data of small to moderately sized coral nubbins in a laboratory setting and characterizes the relationship between buoyant weight and surface area over time for the coral species Stylophora pistillata. Finally, two predictive models are proposed to estimate surface area from weight in air measurements.

The benefits of herbivory outweigh the costs of bioerosion in a eutrophic coral community

Herbivores play an integral part in maintaining the health of coral reefs by suppressing the growth of algae and accumulation of sediment and facilitating coral growth. However, in predator-depleted systems where densities of herbivores are unnaturally high, grazing can have detrimental effects on corals through excessive bioerosion. Yet, these benefits and costs are rarely investigated concurrently, especially in eutrophic systems where grazers may play a disproportionate role. We used a year-long exclusion experiment to elucidate the effect of natural densities of the dominant herbivore (the sea urchin Diadema setosum) on coral communities in a heavily fished and eutrophic system (Hong Kong, China). To assess benthic community response to grazing, we monitored the survival and growth of three locally abundant coral species (Pavona decussata, Platygyra carnosus and Porites sp.), algal and sediment accumulation, and bioerosion of coral skeletons across seasons. We found that urchins maintained our experimental coral assemblages, and when excluded, there was a 25 to 75-fold increase in algal-sediment matrix accumulation. Contrary to predictions, there was no general response of corals to urchin presence; Porites sp. survivorship increased while P. decussata was unaffected, and growth rates of both species was unchanged. Surprisingly, P. carnosus experienced higher mortality and bioerosion of up to 33% of their buoyant weight when urchins were present. Therefore, under natural densities, sea urchins clear substrate of algae and sediment, increase survival, maintain growth rates and health of coral assemblages, yet can accelerate the bioerosion of species with porous skeletons following mortality.

Effects of feeding on the physiological performance of the stony coral Pocillopora acuta

Reef-building corals rely on both heterotrophy and endosymbiotic dinoflagellate autotrophy to meet their metabolic needs. Those looking to culture these organisms for scientific or industrial purposes must therefore consider both feeding regimes and the light environment. Herein the effects of three photosynthetically active radiation (PAR) levels were assessed in fed and unfed specimens of the model coral Pocillopora acuta that were cultured in a recirculating aquaculture system (RAS). Half of the corals were fed Artemia sp. brine shrimp in a separate feeding tank to prevent biofouling, and fragments were exposed to PAR levels of 105, 157, or 250 μmol quanta m−2 s−1 over a 12-h period each day. All cultured corals survived the 140-day treatment, and the physiological response variables assessed-buoyant weight, specific growth rate, linear extension, color, and Fv/Fm-were significantly influenced by feeding, and, to a lesser extent, light. Specifically, fed corals grew faster and larger, and presented darker pigmentation; corals fed at the highest light levels grew at the fastest rate (6 cm year−1 or 175 mg g−1 week−1). Given the high physiological performance observed, we advocate the active feeding of brine shrimp in RAS by those looking to cultivate P. acuta, and likely other corals, over long-term timescales.

Stability Analysis of Partially Submerged Landslide with the Consideration of the Relationship between Porewater Pressure and Seepage Force

For partially submerged landslides, hydrostatic and hydrodynamic pressures, related to water level fluctuation and rainfall, are usually expressed in the form of porewater pressure, seepage force, and buoyancy. There are some connections among them, but it is very easy to confuse one force with another. This paper presents a modified mathematical expression for stability analysis of partially submerged landslide and builds the relationship between porewater pressures and buoyancy acting on the underwater zone of partially submerged landslide and the relationship among porewater pressures, seepage force, and buoyancy acting on partially submerged zone. The porewater pressures acting on the underwater slice are calculated using hydrostatic forces, and the porewater pressures acting on the partially submerged slice are estimated by an approximation of equipotential lines and flow lines under the steady state seepage condition. The resultant of the porewater pressures acting on the underwater slice equals the buoyancy, and that acting on the partially submerged slice is equivalent to the vector sum of seepage force and the buoyancy. The result shows there are two equivalent approaches for considering the effect of water on landslide stability in the limit equilibrium method. One is based on total unit weight and porewater pressures, and the other is in terms of the buoyant weight and the seepage force. The study provides a modified model for simplifying the complex boundary porewater pressures in limit equilibrium analysis for the stability of the partially submerged landslide.

Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera

Large benthic foraminifera are significant contributors to sediment formation on coral reefs, yet they are vulnerable to ocean acidification. Here, we assessed the biochemical and morphological impacts of acidification on the calcification of Amphistegina lessonii and Marginopora vertebralis exposed to different pH conditions. We measured growth rates (surface area and buoyant weight) and Ca-ATPase and Mg-ATPase activities and calculated shell density using micro-computer tomography images. In A. lessonii , we detected a significant decrease in buoyant weight, a reduction in the density of inner skeletal chambers, and an increase of Ca-ATPase and Mg-ATPase activities at pH 7.6 when compared with ambient conditions of pH 8.1. By contrast, M. vertebralis showed an inhibition in Mg-ATPase activity under lowered pH, with growth rate and skeletal density remaining constant. While M. vertebralis is considered to be more sensitive than A. lessonii owing to its high-Mg-calcite skeleton, it appears to be less affected by changes in pH, based on the parameters assessed in this study. We suggest difference in biochemical pathways of calcification as the main factor influencing response to changes in pH levels, and that A. lessonii and M. vertebralis have the ability to regulate biochemical functions to cope with short-term increases in acidity.

Relative abilities to correct rolling disturbances of three morphologically different fish

Responses of three fish species were measured following the addition of neutrally buoyant weight-float combinations that increased rolling instability. The three species were creek chub, Semotilus atromaculatus, largemouth bass, Micropterus salmoides, and bluegill, Lepomis macrochirus. Ability to correct posture was predicted to increase with fin size and body depth in the order creek chub < largemouth bass < bluegill. In a 90-s period, the least added torque causing fish to roll to 90° in response to disturbances, ΔT90, and the least added torque making fish unable to recover from rolling, ΔTcrit, were measured as limits of ability to correct postural disturbances. Contrary to expectations, creek chub required a 58% increase in body torque to reach ΔT90, significantly larger than the 11% increase for largemouth bass and 19% increase for bluegill. Similarly, ΔTcrit was a 78% increase in body torque for creek chub, 43% for largemouth bass, and 34% for bluegill. Increased rolling torques resulted in behaviors reducing and avoiding rolling, including tilting, which reduces metacentric height, inverted swimming, which stabilizes fish, and contacting surfaces, which generates static forces. The superior ability of creek chub to correct postural disturbances may be explained by a fin arrangement that facilitates interactions with the ground.