Estimating photosynthetic capacity from optimized Rubisco–chlorophyll relationships among vegetation types and under global change

The maximum rate of carboxylation (Vcmax), a key parameter indicating photosynthetic capacity, is commonly fixed as a constant by vegetation types and/or varies according to empirical scaling functions in earth system models (ESMs). As such, the setting of Vcmax results in uncertainties of estimated carbon assimilation. It is known that the coupling between leaf chlorophyll and Rubisco (ribulose-1,5-biphosphate carboxylase-oxygenase) contents can be applied to estimate Vcmax. However, how this coupling is affected by environmental changes and varies among plant functional types (PFTs) has not been well investigated yet. The effect of varying coupling between chlorophyll and Rubisco contents on the estimation of Vcmax is still not clear. In this study, we compiled data from 76 previous studies to investigate the coupling between Chlorophyll (Chl) and Rubisco (Rub), in different PFTs and under different environmental conditions. We also assessed the ability of a Rub-based semi-mechanistic model to estimate Vcmax normalized to 25 °C (Vcmax25) based on the Rub–Chl relationship. Our results revealed strong, linear Rub-Chl relationships for different PFTs (R2 = 0.73, 0.67, 0.54, and 0.72 for forest, crop, grass and shrub, and C4 plants, respectively). The Rub–Chl slope of natural C3 PFTs was consistent and significantly different from those of crops and C4 plants. A meta-analysis indicated that reduced light intensity, elevated CO2, and nitrogen addition strongly altered Rub/Chl. A semi-mechanistic model based on PFT-specific Rub–Chl relationships was able to estimate Vcmax25 with high confidence. Our findings have important implications for improving global carbon cycle modeling by ESMs through the improved parameterization of Vcmax25 using remotely sensed Chl content.

Stable carbon isotopic composition of biomass burning emissions – implications for estimating the contribution of C3 and C4 plants

Landscape fires are a significant contributor to atmospheric burdens of greenhouse gases and aerosols. Although many studies have looked at biomass burning products and their fate in the atmosphere, estimating and tracing atmospheric pollution from landscape fires based on atmospheric measurements is challenging due to the large variability in fuel composition and burning conditions. Stable carbon isotopes in biomass burning (BB) emissions can be used to trace the contribution of C3 plants (e.g., trees or shrubs) and C4 plants (e.g. savanna grasses) to various combustion products. However, there are still many uncertainties regarding changes in isotopic composition (also known as fractionation) of the emitted carbon compared to the burnt fuel during the pyrolysis and combustion processes. To study BB isotope fractionation, we performed a series of laboratory fire experiments in which we burned pure C3 and C4 plants as well as mixtures of the two. Using isotope ratio mass spectrometry (IRMS), we measured stable carbon isotope signatures in the pre-fire fuels and post-fire residual char, as well as in the CO2, CO, CH4, organic carbon (OC), and elemental carbon (EC) emissions, which together constitute over 98 % of the post-fire carbon. Our laboratory tests indicated substantial isotopic fractionation in combustion products compared to the fuel, which varied between the measured fire products. CO2, EC and residual char were the most reliable tracers of the fuel 13C signature. CO in particular showed a distinct dependence on burning conditions; flaming emissions were enriched in 13C compared to smouldering combustion emissions. For CH4 and OC, the fractionation was opposite for C3 emissions (13C-enriched) and C4 emissions (13C-depleted). This indicates that while it is possible to distinguish between fires that were dominated by either C3 or C4 fuels using these tracers, it is more complicated to quantify their relative contribution to a mixed-fuel-fire based on the δ13C signature of emissions. Besides laboratory experiments, we sampled gases and carbonaceous aerosols from prescribed fires in the Niassa special Reserve (NSR) in Mozambique, using an unmanned aerial system (UAS)-mounted sampling set-up. We also provide a range of C3 : C4 contributions to the fuel and measured the fuel isotopic signatures. While both OC and EC were useful tracers of the C3 to C4 fuel ratio in mixed fires in the lab, we found particularly OC to be depleted compared to the calculated fuel signal in the field experiments. This suggests that either our fuel measurements were incomprehensive and underestimated the C3 : C4 ratio in the field, or that other processes caused this depletion. Although additional field measurements are needed, our results indicate that C3 vs C4 source ratio estimation is possible with most BB products, albeit with varying uncertainty ranges.

Functional Changes and Threats to Hyperseasonal Neotropical Savannas After Australian Acacia Invasion

The hyperseasonal savanna experiences regular flooding and drought stresses and is a neotropical vegetation type threatened by global change including Acacia spp. invasion. To deepen the understanding of hyperseasonal savannas after Acacia invasion in a climate change scenario, we aimed to answer if: i) the plants of the studied hyperseasonal savanna are separated into C3, C4 or CAM species; ii) Acacia invasion can change the hyperseasonal savanna functioning for C3, C4 and CAM plants; iii) how invasive Acacia uptake water compared to native species in this hyperseasonal savanna. We detected both C3 and C4 metabolic groups of plants but two C3 species are possibly CAM facultative. The functioning of C3 plants as a group was not affected by the Acacia invasion, but this result does not exclude a species turnover between C3 herbs and C3 trees. The C4 plants of invaded Mussununga lost their response of increasing water use efficiency to the increasing Leaf N%. Plants of hyperseasonal savannas depend on the same water source as the soil water from recent rains. There are differences in d18O among species because some grow mostly during the rainy season with the 18O-enriched water meanwhile the invader Acacia mangium grows throughout the year whenever it rains. According to our results, the threat to C4 plants is high and they can be excluded from Mussunungas and from hyperseasonal savannas. However, hyperseasonal savannas are threatened as a vegetation. Therefore, hyperseasonal savannas should be considered critically endangered because of global change, especially bacause Acacia invasions. Initiatives for conservation of hyperseasonal savannas could save these remarkable ecosystems.

Global Distributions of Clarireedia Species and their In Vitro Sensitivity Profiles to Fungicides

Dollar spot is reported to be caused by multiple Clarireedia species and is a serious problem on many turfgrasses around the world. To our knowledge, the distribution of different Clarireedia species and their sensitivity profiles to fungicides remains unknown. In this study, a total of 275 isolates were characterized by ITS sequence. Amounts of 124, 59 and 75 isolates were identified as C. jacksonii, C. monteithiana and C. paspali, respectively, while each species of C. homoeocarpa and C. bennettii had only five isolates. Four and three isolates were identified as two potential new species, which remained to be further characterized. C. jacksonii and C. monteithiana were distributed worldwide, while C. paspali was restricted to China. Of the isolates with host information, 81% (93/115) and 19% (22/115) of C. jacksonii isolates were collected from C3 and C4 plants, respectively, 97% (56/58) of the C. monteithiana isolates were collected from C4 plants and all C. paspali isolates were collected from C4 plants. The coexistence of different Clarireedia species on the same C4 host type in the same locales was found in Shanghai (Paspalum vaginatum), Jiangsu (Paspalum vaginatum) and Florida (Cynodon dactylon). The study revealed that differential fungicide sensitivity patterns were observed in different species in Clarireedia for the first time. Similar differential sensitivity profiles were also found in the locales with coexistence of at least two species. The findings from this study suggest that the adjacent coexistence of different Clarireedia species and the differential fungicide sensitivity profiles of different species will complicate dollar spot disease control.

Weeds and Their Responses to Management Efforts in A Changing Climate

Crop production is a constant battle with weeds, in which weeds, generally, are victorious. Therefore, rather than channeling our efforts into the development of a “silver bullet” to control weeds, the focus should be on sustainable weed management in both natural- and agro-ecosystems. However, sustainable weed management can be a challenge in the context of global climate change. Over the past few decades, global climate change, mostly indicated by phenomena such as increased atmospheric temperature and elevated CO2 levels, is evident due to human activities and natural events. These phenomena also affect regional/local climate, resulting in significant influences on the agricultural systems of a particular region. Rising CO2 levels may give comparative advantages to C3 plants through increased photosynthesis, biomass production and yield, compared to C4 plants. Plants with C4 photosynthetic pathways, on the other hand, are likely to benefit more from rising global temperatures than C3 plants. Thus, the differential responses of C3 and C4 plants to climate change may alter crop–weed interactions and competition outcomes, most likely at the expense of the crop. Climate change will likely cause shifts in weed community compositions, their population dynamics, life cycle, phenology, and infestation pressure. Some weed species may go extinct, while some others may become more aggressive invaders. Weeds are, generally, colonizers and have some unique biological traits and ecological amplitudes that enable them to successfully dominate crops in a habitat with changed environmental conditions. Moreover, climate shifts, especially erratic rainfall and drought, may affect herbicide selectivity and efficacy or the success of bio-control agents resulting in an establishment of a mixed and complex population of C3 and C4 weed species adding to the complexity of weed management. Although elevated CO2 levels will stimulate the productivity of major C3 crops, most troublesome agricultural weeds will likely be more responsive to a rise in CO2 than crops, and thus may dominate the agro-ecosystem. It is predicted that, as temperature rises, the majority of the C4 weeds will flourish and will pose serious crop yield losses. Understanding and assessment of the impact of simultaneous changes in multiple climate factors and their complex interactions on crops and weeds are therefore necessary to formulate an adaptive weed management approach and build resilience. Moreover, strategic policies and strong actions need to be taken to reduce the root causes of CO2 and other greenhouse gas emissions to minimize the impact of climate change on weed biology and management.

Understanding Maize Response to Nitrogen Limitation in Different Light Conditions for the Improvement of Photosynthesis

The photosynthetic capacity of leaves is determined by their content of nitrogen (N). Nitrogen involved in photosynthesis is divided between soluble proteins and thylakoid membrane proteins. In C4 plants, the photosynthetic apparatus is partitioned between two cell types: mesophyll cells and bundle sheath. The enzymes involved in the C4 carbon cycle and assimilation of nitrogen are localized in a cell-specific manner. Although intracellular distribution of enzymes of N and carbon assimilation is variable, little is known about the physiological consequences of this distribution caused by light changes. Light intensity and nitrogen concentration influence content of nitrates in leaves and can induce activity of the main enzymes involved in N metabolism, and changes that reduce the photosynthesis rate also reduce photosynthetic N use efficiency. In this review, we wish to highlight and discuss how/whether light intensity can improve photosynthesis in maize during nitrogen limitation. We described the general regulation of changes in the main photosynthetic and nitrogen metabolism enzymes, their quantity and localization, thylakoid protein abundance, intracellular transport of organic acids as well as specific features connected with C4 photosynthesis, and addressed the major open questions related to N metabolism and effects of light on photosynthesis in C4 plants.

Challenges and Approaches to Crop Improvement Through C3-to-C4 Engineering

With a rapidly growing world population and dwindling natural resources, we are now facing the enormous challenge of increasing crop yields while simultaneously improving the efficiency of resource utilization. Introduction of C4 photosynthesis into C3 crops is widely accepted as a key strategy to meet this challenge because C4 plants are more efficient than C3 plants in photosynthesis and resource usage, particularly in hot climates, where the potential for productivity is high. Lending support to the feasibility of this C3-to-C4 engineering, evidence indicates that C4 photosynthesis has evolved from C3 photosynthesis in multiple lineages. Nevertheless, C3-to-C4 engineering is not an easy task, as several features essential to C4 photosynthesis must be introduced into C3 plants. One such feature is the spatial separation of the two phases of photosynthesis (CO2 fixation and carbohydrate synthesis) into the mesophyll and bundle sheath cells, respectively. Another feature is the Kranz anatomy, characterized by a close association between the mesophyll and bundle sheath (BS) cells (1:1 ratio). These anatomical features, along with a C4-specific carbon fixation enzyme (PEPC), form a CO2-concentration mechanism that ensures a high photosynthetic efficiency. Much effort has been taken in the past to introduce the C4 mechanism into C3 plants, but none of these attempts has met with success, which is in my opinion due to a lack of system-level understanding and manipulation of the C3 and C4 pathways. As a prerequisite for the C3-to-C4 engineering, I propose that not only the mechanisms that control the Kranz anatomy and cell-type-specific expression in C3 and C4 plants must be elucidated, but also a good understanding of the gene regulatory network underlying C3 and C4 photosynthesis must be achieved. In this review, I first describe the past and current efforts to increase photosynthetic efficiency in C3 plants and their limitations; I then discuss a systems approach to tackling down this challenge, some practical issues, and recent technical innovations that would help us to solve these problems.

Determination of the mixing extent of sugar from C4 plants in juice using the isotopic signature of carbon (δ13C) in sugar

The objective of this study was to apply a method for estimating the mixing extent of C4 sugar in juice (apple) based on the fingerprinting of carbon stable isotope (δ13C). The values of δ13C in sugar separated from fresh apples, pure apple juices as well as sugar produced from C4 plants (plants conduct C4 cycle photo-synthesis, in this case, it was sugar canes) were analysed on an isotope ratio mass spectrometer equipped with an elemental analyzer (EA IRMS). The results showed that the δ13C in sugar separated from fresh apples was in the range of -27.00 to -24.00‰ with an average of -25.47‰ (n=6) vs. VPDB standard (Vienna Pee Dee Belemnite). Meanwhile, the δ13C in sugar cane products ranged from -13.00 to -11.00‰, with an average of -12,47‰ vs. VPDB. Based on the isotope signature of carbon (δ13C) and the two end-members mixing model, the extent of mixing C4 sugar in apple juice available on the market could be estimated precisely. It was found one out of 9 apple juice samples available in the Hanoi markets to have a high content of C4 sugar mixed in the product, it was up to 96% instead of 5% as proclaimed on the label. The developed method seems to be of high accuracy so it was advisable to wider its application in the evaluation of the quality of juices available at the markets in Vietnam to ensure the right of the consumers.