Arabidopsis NLP7 improves nitrogen use efficiency and yield in cotton

Background Nitrogen (N) is a required macronutrient for cotton growth and productivity. Excessive N fertilizers are applied in agriculture for crop yield maximization, which also generates environmental pollution. Improving crop N use efficiency (NUE) is the most economical and desirable way of reducing fertilizer application and environmental pollution. NUE has been an important issue in cotton. So far there is no report on cotton NUE improvement via transgenic approach. Nin-like proteins (NLP) are transcription factors regulating NUE. We previously demonstrated that AtNLP7 improved NUE and biomass when overexpressed in Arabidopsis. However, it is not known whether AtNLP7 can be used to improve NUE in crops. Results To test the feasibility, we expressed AtNLP7 in cotton and evaluated NUE and yield of the transgenic cotton in the field. Transgenic cotton showed improved NUE and yield under both low and high N conditions. In addition, plant biomass, amount of absorbed N, N contents, activities of N-assimilating enzymes, and the expression of N-related marker genes were significantly increased in transgenic cotton compared with the wild type control, suggesting that AtNLP7 enhances NUE in cotton. Conclusion Together, our results demonstrate that AtNLP7 is a promising candidate to improve NUE and yield in cotton.

Evaluation of Thellungiella halophila ST7 for improving salt tolerance in cotton

Background Gossypium hirsutum (upland cotton) is one of the principal fiber crops in the world. Cotton yield is highly affected by abiotic stresses, among which salt stress is considered as a major problem around the globe. Transgenic approach is efficient to improve cotton salt tolerance but depending on the availability of salt tolerance genes. Results In this study we evaluated salt tolerance candidate gene ST7 from Thellungiella halophila, encoding a homolog of Arabidopsis aluminum-induced protein, in cotton. Our results showed that ThST7 overexpression in cotton improved germination under NaCl stress as well as seedling growth. Our field trials also showed that ThST7 transgenic cotton lines produced higher yield under salt stress conditions. The improved salt tolerance of the transgenic cotton lines was partially contributed by enhanced antioxidation as shown by diaminobenzidine (DAB) and nitrotetrazolium blue chloride (NBT) staining. Moreover, transcriptomic analysis of ThST7 overexpression lines showed a significant upregulation of the genes involved in ion homeostasis and antioxidation, consistent with the salt tolerance phenotype of the transgenic cotton. Conclusions Our results demonstrate that ThST7 has the ability to improve salt tolerance in cotton. The ThST7 transgenic cotton may be used in cotton breeding for salt tolerance cultivars.

Genotypic variation in root morphology, cotton subtending leaf physiology and fiber quality against nitrogen

Background Nitrogen (N) is important for improving various morphological and physiological processes of cotton but their contribution to fiber quality is still lacking. Aims The current study aimed to explore the relationship between root morphology, subtending leaf physiology, and fiber quality of contrasting N-efficient cotton genotypes in response to N. Methods We analyzed the above parameters of CCRI 69 (N-efficient) and Xinluzao-30 (XLZ-30, N-inefficient) under control (2.5 mmol·L−1) and high N (5 mmol·L−1) conditions. Results The results showed that root morphological traits were increased in CCRI-69 under control conditions than high N. Subtending leaf morphology, chlorophyll and carotenoid contents, free amino acids, and soluble proteins were higher under high N as compared with the control. However, soluble sugars, fructose, sucrose contents, and sucrose phosphate synthase were higher under control conditions than high N across the growth stages. Irrespective of the N conditions, all morphological and physiological traits of cotton subtending leaf were higher in CCRI-69 than XLZ-30. Except for fiber uniformity, fiber quality traits like fiber length, strength, micronaire, and elongation were improved under control conditions than high N. Between the genotypes, CCRI-69 had significantly higher fiber length, strength, micronaire, and elongation as compared with XLZ-30. Strong positive correlations were found between root morphology, soluble sugars, sucrose content, and sucrose phosphate synthase activity with fiber quality traits, respectively. Conclusions These findings suggest that CCRI-69 performed better in terms of growth and fiber quality under relatively low N condition, which will help to reduce fertilizer use, the cost of production, and environmental pollution.

The effects of straw-returning and inorganic K fertilizer on the carbon–nitrogen balance and reproductive growth of cotton

Background Many studies have indicated that straw-returning could meet part or even all of the potassium (K) demand for crop growth in the field, but few have compared the effects of crop straw as K source and inorganic K fertilizer on carbon–nitrogen (C–N) balance of cotton and the reproductive growth. To address this, field experiments were conducted using the cotton cultivar, Siza 3, under there treatments (CK as control group one, no crop straw and inorganic K fertilizer were applied; K150 as control group two, 150 kg·ha−1 of K2O was applied; and W9000, 9 000 kg·ha−1 wheat straw, which could provide K2O about 150 kg·ha−1, was incorporated into soil). Results Although the final reproductive organ biomass did not differ between W9000 and K150, W9000 had a higher ratio of reproductive organ biomass to total biomass (RRT), suggesting that straw-returning was more conducive to the allocation of biomass to reproductive organs. The theoretical maximum biomass of reproductive organ was higher, but the average and maximum accumulation rates of reproductive organ biomass were 2.8%∼8.3% and 2.5%∼8.2% lower under W9000 than K150. Also, the duration of rapid-accumulation period for reproductive organ biomass (T) was 2.0∼2.8 d longer under W9000 than K150, which was a reason for the higher RRT under W9000. Straw-returning altered the dynamics of leaf K with the growth period, so that W9000 had a more drastic effect on leaf C metabolism than K150. Consequently, lower soluble sugar/free amino acid and C/N ratios were measured under W9000 than K150 at boll-setting (BSS) and boll-opening (BOS) stages. Higher leaf net photosynthetic rate, sucrose phosphate synthase and sucrose synthase activities, and lower acid invertase activity were observed under W9000 than K150 at BSS and BOS and these were more conducive to sucrose accumulation. However, less sucrose was measured under W9000 than K150 at these stages. This should be because straw-returning promoted the assimilate transport capacity when compared with inorganic K fertilizer application, which also explained the higher RRT under W9000 than K150. The lower acid invertase activity under W9000 inhibited the conversion of sucrose to other sugars, hence lower contents of soluble sugar and starch were measured under W9000 than K150. Conclusion Under low K condition, crop straw as K source can increase the assimilate transport from source to sink, leading to lower C/N ratio in leaf and higher allocation of biomass to reproductive organs than inorganic K fertilizer.

Effect of vapour pressure deficit on gas exchange of field-grown cotton

Background Plants respond to changes in vapour pressure deficit (VPD) between the leaf and the atmosphere through changes in stomatal response, which can consequently affect transpiration, photosynthesis, and leaf-level water use efficiencies. With projected warmer air temperatures, changes in rainfall distribution and altered VPD in future climates, it is important to understand the potential effect of VPD on leaf-level physiology of field-grown crops. The aim of this study was to assess the impact of altered VPD on leaf-level physiology of field-grown cotton to improve the current understanding of the plant-by-environment interaction, thereby contributing to validation and improvement of physiological and yield response models. Different VPD environments in the field were generated by planting cotton on three dates within the sowing window (early-season (S1) = 5th October 2011; mid-season (S2) = 9th November 2011; and late-season (S3) = 30th November 2011). VPD was also modified by altering crop irrigations. Results VPDL accounted for the largest proportion of the explained variation in both stomatal conductance (32%∼39%) and photosynthetic (16%∼29%) responses of cotton. Generally, smaller percentages of variation were attributed to other main factors such as the individual plant (Plant), and accumulated temperature stress hours (ASH; a measure of plant water status over time) and interactive factors, including leaf vapour pressure deficit (VPDL) × Plant and Plant × ASH; however, a proportion of variation was unexplained. In addition, the Asat/E (instantaneous transpiration efficiency, ITE) model developed based on cotton grown in the glasshouse was applied to cotton grown in the field. We found that the modelled Asat/E and field-measured Asat/E were very similar, suggesting that the mechanistic basis for ITE was similar in both environments. Conclusions This study highlights the importance of accounting for VPD in climate change research, given that stomata are highly responsive to changes in VPD. This experiment provides a basis for physiology and production models, particularly in terms of cotton response to projected climatic environments.

A discussion on cotton transformation during the last decade (2010–2021); an update on present trends and future prospects

The introduction of genetically modified (GM) cotton in 1996 in the US and its worldwide spread later rejuvenated cotton production in many parts of the world. The evolution is continued since then and currently, the 3rd and fourth generation of same GM cotton is grown in many parts of the world. The GM cotton introduced in 1996 was simple Bt cotton that expressed a single Cry1Ac gene, the later generation carried multiple Cry genes along with the genes controlling herbicide tolerance. Current day GM cotton does not only give stable resistance against lepidopteran insects but also facilitates the farmers to spray broad-spectrum herbicides without harming the crop. The evolution of GM cotton is continued both on the basic and applied side and interventions have been introduced during the last decade. Earlier the cotton transformation was limited to Cocker strains which are getting possible in many other varieties, too. It is successful with both gene gun, and Agrobacterium and inplanta transformation has made it a routine activity. Apart from overexpression studies for various purposes including biotic, abiotic, and quality traits, RNAi and genome editing are explored vigorously. Through this review, we have tried to explore and discuss various interventions for improving transformation protocols, the applications of cotton transformation, and future strategies being developed to get maximum benefits from this technology during the last decade.

The effect of time and type of stress moderators on yield and yield components of cotton on conventional and double-cropping systems under saline conditions

Background Today, stress moderators are employed to mitigate crop loss due to the adverse effects of environmental stress. The current research aimed to investigate the impacts of time and stress moderator types on agro-physiological responses of cotton on conventional and double-cropping systems during 2017 and 2018 under saline conditions. A split-plot factorial experiment was carried out in a randomized complete block design with three replications. Cultivation system [conventional (recommended planting date) and double-cropping systems (sowing after harvest of wheat)] were considered as the main plots, and stress moderator type at four levels [water control, 2 mmol·L–1 Salicylic acid (SA), 100 mmol·L–1 Glycine betaine (GB), and 100 μmol·L–1 sodium nitroprusside (SNP)] and application time (flowering and flowering + bolling stages) were regarded as subplots. Results Plant height, reproductive branch number, the number of bolls, 10-boll weight, 1 000-seed weight, biological yield, seed cotton yield, lint yield, chlorophyll a, chlorophyll b, carotenoids, total chlorophyll, sodium, potassium, and proline content were less in double-cropping system comparing with conventional system. Spraying with the stress moderators alleviated soil salinity effects on yield, yield components, and biochemical traits of cotton. SNP spraying led to maximum plant height, branch number, the number of bolls per plant, 10-boll weight and seed cotton yield. SA spraying yielded the highest 1 000-seed weight, biological yield, lint percentage and lint yield. The highest chlorophyll a, chlorophyll b, carotenoids, and total chlorophyll content resulted from SNP spraying. Yield, yield components, and biochemical traits did not respond to the stress moderator types in double-cropping system. However, the highest chlorophyll a, carotenoids, proline content, the number of bolls per plant, and seed cotton yield resulted from SNP spraying in conventional system. No statistically significant differences were observed between spraying with SNP and SA in most studied traits. Conclusions The results suggest that the optimum cotton planting time and SNP spraying could be recommended for producing the most suitable yield under saline conditions. Highlights External application of stress modulators increases salinity stress tolerance. Spraying with sodium nitroprusside has more moderating effect. Agro-physiological response of cotton to moderators is stronger in early sowing. Maximum seed cotton yield was achieved at early sowing and spraying sodium nitroprusside. Delayed cultivation reduces cotton yield.

Knockdown of 60S ribosomal protein L14-2 reveals their potential regulatory roles to enhance drought and salt tolerance in cotton

Background Cotton is a valuable economic crop and the main significant source of natural fiber for textile industries globally. The effects of drought and salt stress pose a challenge to strong fiber and large-scale production due to the ever-changing climatic conditions. However, plants have evolved a number of survival strategies, among them is the induction of various stress-responsive genes such as the ribosomal protein large (RPL) gene. The RPL gene families encode critical proteins, which alleviate the effects of drought and salt stress in plants. In this study, comprehensive and functional analysis of the cotton RPL genes was carried out under drought and salt stresses. Results Based on the genome-wide evaluation, 26, 8, and 5 proteins containing the RPL14B domain were identified in Gossypium hirsutum, G. raimondii, and G. arboreum, respectively. Furthermore, through bioinformatics analysis, key cis-regulatory elements related to RPL14B genes were discovered. The Myb binding sites (MBS), abscisic acid-responsive element (ABRE), CAAT-box, TATA box, TGACG-motif, and CGTCA-motif responsive to methyl jasmonate, as well as the TCA-motif responsive to salicylic acid, were identified. Expression analysis revealed a key gene, Gh_D01G0234 (RPL14B), with significantly higher induction levels was further evaluated through a reverse genetic approach. The knockdown of Gh_D01G0234 (RPL14B) significantly affected the performance of cotton seedlings under drought/salt stress conditions, as evidenced by a substantial reduction in various morphological and physiological traits. Moreover, the level of the antioxidant enzyme was significantly reduced in VIGS-plants, while oxidant enzyme levels increased significantly, as demonstrated by the higher malondialdehyde concentration level. Conclusion The results revealed the potential role of the RPL14B gene in promoting the induction of antioxidant enzymes, which are key in oxidizing the various oxidants. The key pathways need to be investigated and even as we exploit these genes in the developing of more stress-resilient cotton germplasms.

Tolerance of Pima and Upland cotton to trifloxysulfuron (Envoke) herbicide under field conditions

Trifloxysulfuron (Envoke) is an acetolactate synthase-inhibitor herbicide and can be used to control many broadleaf weeds and nutsedges in cotton production. However, there is a lack of information on genotypic variation in response to the herbicide. In this field study, 60 Pima (Gossypium barbadense L.) lines, 122 Upland (G. hirsutum L.) lines, and 9 Upland × Pima segregating populations were divided into five tests (18A, 18B, 18G, 18RB, and 18HQ) to evaluate trifloxysulfuron tolerance at the 7-true leaf stage (42 days after planting) under the same field conditions in 2018. Across the five tests, Pima cotton genotypes tested in this study did not show any visual crop injury based on percentage of plants with chlorosis at 6 days after treatment (DAT), indicating consistent and high levels of trifloxysulfuron tolerance. However, the response to trifloxysulfuron within Upland cotton is highly variable. While Upland cotton is overall more sensitive to trifloxysulfuron with crop injury up to 80% than Pima cotton, 19 lines had injury below 5% including one line with no visual injury, and 19 lines had injury between 5% and 10%. In test 18HQ with 15 transgenic Upland cultivars and 17 non-transgenic Upland lines, the analysis of variance detected a significant genotypic difference. The broad-sense heritability estimates for trifloxysulfuron tolerance based on crop injury at 6 DAT was 0.555, suggesting that trifloxysulfuron tolerance in Upland cotton is moderately heritable. This study represents the first report that Pima cotton and many Upland cotton lines are highly tolerant to trifloxysulfuron with no or little crop injury.

Current advances in pathogen-plant interaction between Verticillium dahliae and cotton provide new insight in the disease management

Verticillium wilt is the second serious vascular wilt caused by the phytopathogenic fungus Verticillium dahliae Kleb. It has distributed worldwide, causing serious yield losses and fiber quality reduction in cotton production. The pathogen has developed different mechanisms like the production of cell wall degrading enzymes, activation of virulence genes and protein effectors to succeed in its infection. Cotton plant has also evolved multiple mechanisms in response to the fungus infection, including a strong production of lignin and callose deposition to strengthen the cell wall, burst of reactive oxygen species, accumulation of defene hormones, expression of defense-related genes, and target-directed strategies like cross-kingdom RNAi for specific virulent gene silencing. This review summarizes the recent progress made over the past two decades in understanding the interactions between cotton plant and the pathogen Verticillium dahliae during the infection process. The review also discusses the achievements in the control practices of cotton verticillium wilt in recent years, including cultivation practices, biological control, and molecular breeding strategies. These studies reveal that effective management strategies are needed to control the disease, while cultural practices and biological control approaches show promising results in the future. Furthermore, the biological control approaches developed in recent years, including antagonistic fungi, endophytic bacteria, and host induced gene silencing strategies provide efficient choices for integrated disease management.