Plant deposition in modern volcanic environments

Author(s):  
Robyn J. Burnham

ABSTRACTVolcanic eruptions and their deposits provide paleobiologists with an array of depositional environments in which to investigate the conditions in which exceptionally preserved flora and fauna are preserved. Studies of vegetation patterns before and after eruptions have shown that tropical vegetation makes a very rapid recovery at the vegetational level (proportion of devastated land covered). The recolonisation of the rare elements of a diversified flora, however, is slow, and so is the rebound of floristic richness, assembled over centuries from surrounding patches of vegetation and from in situ speciation.Two major volcanic events that occurred in the past 15 years were studied in an attempt to understand the processes and complex patterns of plant deposition in volcanic landscapes. Both volcanoes gave rise to terrestrial, andesitic, explosive eruptions that gave little warning of their absolute magnitude or duration. In both eruptions, sediment-dammed lakes were formed in which a large quantity of plant material was trapped. In both instances, forests were killed and both standing and fallen trunks record the composition of the pre-eruption flora. The vegetation present in the vicinity of the volcanoes was, in the case of Mount St Helens (Washington, U.S.A.), dense coniferous forest living in a cool temperate climate and, in the case of El Chichón (Chiapas, Mexico), remnants of paratropical rainforest alternating with patches of agricultural land.Litter layers are present under the tephra at both volcanic sites, yet the pattern of deposition and quality of the plant material differs dramatically between the two, in part because of differences in the types of eruptions and in part because of the nature of the plants available for burial. One of the most significant styles of burial, unexpected in the air-fall ash deposits, is the presence of more than one eruptive layer generated by eruptions only hours apart. These separate eruption layers have different lithological characteristics and the plant deposits buried in the different layers are different in taxonomic composition. Significantly, leaves in the upland volcanic-ash deposits are preserved thus far for 10 years, even in the tropical settings where root growth might be expected to have obliterated all signs of depositional stratigraphy. These impressions and compressions have a high likelihood of entering the fossil record and provide an excellent example of upland deposition and preservation.

2020 ◽  
Vol 8 (8) ◽  
pp. 1146 ◽  
Author(s):  
Naomie Bleau ◽  
Sidki Bouslama ◽  
Pierre Giovenazzo ◽  
Nicolas Derome

Microbial symbionts inhabiting the honeybee gut (i.e., gut microbiota) are essential for food digestion, immunity, and gut protection of their host. The taxonomic composition of the gut microbiota is dynamic throughout the honeybee life cycle and the foraging season. However, it remains unclear how drastic changes occurring in winter, such as food shortage and cold weather, impact gut microbiota dynamics. The objective of this study was to characterize the gut microbiota of the honeybee during the overwintering period in a northern temperate climate in Canada. The microbiota of nine honeybee colonies was characterized by metataxonomy of 16S rDNA between September 2017 and June 2018. Overall, the results showed that microbiota taxonomic composition experienced major compositional shifts in fall and spring. From September to November, Enterobacteriaceae decreased, while Neisseriaceae increased. From April to June, Orbaceae increased, whereas Rhizobiaceae nearly disappeared. Bacterial diversity of the gut microbiota decreased drastically before and after overwintering, but it remained stable during winter. We conclude that the honeybee gut microbiota is likely to be impacted by the important meteorological and dietary changes that take place before and after the overwintering period. Laboratory trials are needed to determine how the observed variations affect the honeybee health.


Biomolecules ◽  
2021 ◽  
Vol 11 (5) ◽  
pp. 726
Author(s):  
Ronald Biemann ◽  
Enrico Buß ◽  
Dirk Benndorf ◽  
Theresa Lehmann ◽  
Kay Schallert ◽  
...  

Gut microbiota-mediated inflammation promotes obesity-associated low-grade inflammation, which represents a hallmark of metabolic syndrome. To investigate if lifestyle-induced weight loss (WL) may modulate the gut microbiome composition and its interaction with the host on a functional level, we analyzed the fecal metaproteome of 33 individuals with metabolic syndrome in a longitudinal study before and after lifestyle-induced WL in a well-defined cohort. The 6-month WL intervention resulted in reduced BMI (−13.7%), improved insulin sensitivity (HOMA-IR, −46.1%), and reduced levels of circulating hsCRP (−39.9%), indicating metabolic syndrome reversal. The metaprotein spectra revealed a decrease of human proteins associated with gut inflammation. Taxonomic analysis revealed only minor changes in the bacterial composition with an increase of the families Desulfovibrionaceae, Leptospiraceae, Syntrophomonadaceae, Thermotogaceae and Verrucomicrobiaceae. Yet we detected an increased abundance of microbial metaprotein spectra that suggest an enhanced hydrolysis of complex carbohydrates. Hence, lifestyle-induced WL was associated with reduced gut inflammation and functional changes of human and microbial enzymes for carbohydrate hydrolysis while the taxonomic composition of the gut microbiome remained almost stable. The metaproteomics workflow has proven to be a suitable method for monitoring inflammatory changes in the fecal metaproteome.


2021 ◽  
Vol 13 (15) ◽  
pp. 8559
Author(s):  
Nhung Pham Thi ◽  
Martin Kappas ◽  
Heiko Faust

Agricultural land acquisition for urbanization (ALAFU) has strongly impacted agriculture in Vietnam during the last decades. Given the mixed data obtained from a survey with 50 households who lost 50% of their farmland area (in-depth interviews, a group-focused discussion and observation) this study shows the different impacts of ALAFU on each agricultural activity of affected household by comparing before and after ALAFU. Rice cultivation and animal breeding have sharply declined, but potted flower plantation (PFP) has quickly grown and is the main income of 34% of surveyed households. Rice cultivation has declined not only as a result of agricultural land acquisition, which has resulted in the loss of rice land, but also as a result of urbanization, which has resulted in rice land abandonment. Conversely, PFP is growing due to advantages associated with urbanization, such as a good consumer market and upgraded infrastructure. However, whether they are declining or increasing, all agricultural activities have to face challenges related to the shortcomings in agricultural land allocation and agricultural development plans. This study suggests that if ALAFU projects are continued, the government should evaluate agricultural development and forecast farmland abandonment after ALAFU. Simultaneously, they should put more effort into maintaining agriculture in the form of peri-urban or urban agriculture, which is significant for sustainable development in affected communities.


Author(s):  
Allison Neil

Soil properties are strongly influenced by the composition of the surrounding vegetation. We investigated soil properties of three ecosystems; a coniferous forest, a deciduous forest and an agricultural grassland, to determine the impact of land use change on soil properties. Disturbances such as deforestation followed by cultivation can severely alter soil properties, including losses of soil carbon. We collected nine 40 cm cores from three ecosystem types on the Roebuck Farm, north of Perth Village, Ontario, Canada. Dominant species in each ecosystem included hemlock and white pine in the coniferous forest; sugar maple, birch and beech in the deciduous forest; grasses, legumes and herbs in the grassland. Soil pH varied little between the three ecosystems and over depth. Soils under grassland vegetation had the highest bulk density, especially near the surface. The forest sites showed higher cation exchange capacity and soil moisture than the grassland; these differences largely resulted from higher organic matter levels in the surface forest soils. Vertical distribution of organic matter varied greatly amongst the three ecosystems. In the forest, more of the organic matter was located near the surface, while in the grassland organic matter concentrations varied little with depth. The results suggest that changes in land cover and land use alters litter inputs and nutrient cycling rates, modifying soil physical and chemical properties. Our results further suggest that conversion of forest into agricultural land in this area can lead to a decline in soil carbon storage.


Palaios ◽  
2020 ◽  
Vol 35 (1) ◽  
pp. 12-21
Author(s):  
BENJAMIN E. RENDALL ◽  
LEIF TAPANILA

ABSTRACT Conformable limestone deposits bracketing the Alamo breccia (Late Devonian, Nevada) provide a robust dataset for comparisons of depositional environments and marine communities before and after a significant meteor impact. Rank abundances of more than 3000 faunal identifications from 158 sampling localities cluster in three major faunal groups that are arranged in an onshore-offshore lithofacies gradient. Comparison of faunal clusters before and after the impact show little to no dissimilarity. The recovery of marine invertebrate communities following the Alamo impact event was geologically instantaneous. Broad geographic ranges of the fauna may have contributed to ecological resilience. From a geologic perspective, marine communities appear to rebound quickly and fully following meteor impacts, leaving impact-related extinctions as outliers that correspond only to the largest impacts.


2002 ◽  
Vol 57 (3) ◽  
pp. 401-408 ◽  
Author(s):  
G. Russell Coope

AbstractMore than 30 fossil coleopteran (beetle) assemblages have been recorded from oxygen isotope stage 3 in northern Europe, comprising several hundred identified species. Using the mutual climatic range method for quantifying palaeotemperatures, these assemblages show that the climates of the times can be divided into two distinct interstadial types. One, a short phase of temperate/oceanic climate occurred between 43,000 and 42,000 14C yr B.P. when conditions were not much different from those of the present day. In spite of the temperate climate, trees did not colonize northwestern Europe at this time. Two, both before and after this temperate interlude there were phases of cold/continental climate during which summers were too cold for trees to grow and winters were of Siberian intensity. It is possible that periods of even colder conditions intervened from time to time between the interstadial but, because of the intensity of the cold, biological systems were so inhibited that no fossil evidence for them can be found in northern Europe. Evidence for them must be sought in the fossil records from the warmer parts of southern Europe or in the physical evidence in the Greenland ice cores.


mBio ◽  
2015 ◽  
Vol 6 (1) ◽  
Author(s):  
Baochen Shi ◽  
Michaela Chang ◽  
John Martin ◽  
Makedonka Mitreva ◽  
Renate Lux ◽  
...  

ABSTRACTThe human microbiome influences and reflects the health or disease state of the host. Periodontitis, a disease affecting about half of American adults, is associated with alterations in the subgingival microbiome of individual tooth sites. Although it can be treated, the disease can reoccur and may progress without symptoms. Without prognostic markers, follow-up examinations are required to assess reoccurrence and disease progression and to determine the need for additional treatments. To better identify and predict the disease progression, we aim to determine whether the subgingival microbiome can serve as a diagnosis and prognosis indicator. Using metagenomic shotgun sequencing, we characterized the dynamic changes in the subgingival microbiome in periodontitis patients before and after treatment at the same tooth sites. At the taxonomic composition level, the periodontitis-associated microorganisms were significantly shifted from highly correlated in the diseased state to poorly correlated after treatment, suggesting that coordinated interactions among the pathogenic microorganisms are essential to disease pathogenesis. At the functional level, we identified disease-associated pathways that were significantly altered in relative abundance in the two states. Furthermore, using the subgingival microbiome profile, we were able to classify the samples to their clinical states with an accuracy of 81.1%. Follow-up clinical examination of the sampled sites supported the predictive power of the microbiome profile on disease progression. Our study revealed the dynamic changes in the subgingival microbiome contributing to periodontitis and suggested potential clinical applications of monitoring the subgingival microbiome as an indicator in disease diagnosis and prognosis.IMPORTANCEPeriodontitis is a common oral disease. Although it can be treated, the disease may reoccur without obvious symptoms. Current clinical examination parameters are useful in disease diagnosis but cannot adequately predict the outcome of individual tooth sites after treatment. A link between the subgingival microbiota and periodontitis was identified previously; however, it remains to be investigated whether the microbiome can serve as a diagnostic and prognostic indicator. In this study, for the first time, we characterized the subgingival microbiome of individual tooth sites before and after treatment using a large-scale metagenomic analysis. Our longitudinal study revealed changes in the microbiota in taxonomic composition, cooccurrence of subgingival microorganisms, and functional composition. Using the microbiome profiles, we were able to classify the clinical states of subgingival plaque samples with a high accuracy. Follow-up clinical examination of sampled sites indicates that the subgingival microbiome profile shows promise for the development of diagnostic and prognostic tools.


Nematology ◽  
2003 ◽  
Vol 5 (2) ◽  
pp. 179-181 ◽  
Author(s):  
Liliane Ruess

AbstractCarbon flow via decomposition of organic matter proceeds through different energy channels depending on the input and turnover rate of plant material. Generally, energy channels in grasslands are considered to be bacteria-dominated, whereas in forests the importance of fungal decomposition increases. Agroecosystems are regarded as intermediate. This hypothesis was tested using indices based on nematode faunal analysis that have been proposed as indicators of decomposition pathways. The ratio of fungal- to bacterial-feeding nematodes and the channel index (Ferris et al., 2001) were calculated from a range of studies, taking into account 131 different sites or sampling times. No distinct differences in the fungal- to bacterial-feeder ratio between grassland, field and forest were observed. However, the channel index indicated a fungal-based energy channel in coniferous forest sites. Generally, the results suggest that soil and climate affect nematode faunal indices more strongly than ecosystem type.


2013 ◽  
Vol 11 (2) ◽  
pp. 57 ◽  
Author(s):  
Sukristiyonubowo Sukristiyonubowo ◽  
D. Gabriels ◽  
M. Verlooc

Terraced paddy field is not only important for rural food security, but also for trapping sediment in the slopping land. The aims of this research were to quantify the amount of incoming and outgoing sediments and to study sediment movement behavior during harrowing and fertilizing under traditional irrigation of terraced paddy field system. This study was carried out at Keji Village, Semarang District, Central Java during two cropping seasons, a wet season 2003/04 and a dry season 2004. A paddy field with eight terraces was selected. The terraces were flat, different in size and descending to the river. Sediment samples were taken at harrowing and fertilizing activities. The results indicated that at harrowing, outgoing sediment was higher than incoming both during the wet and the dry seasons. About 0.53 and 0.27 t ha-1 day-1 of soil were eroded during harrowing in the wet and the dry seasons, respectively. However, a week before and after fertilizing, both in the wet and the dry seasons, the amounts of incoming sediment were higher than the outgoing one. In the wet season, the amounts of incoming sediments were three to four times higher than the outgoing one, both a week before and after fertilizing. During the wet season, about 0.31 and 0.34 t ha-1 day-1 of sediment was yielded a week before and after fertilizing, respectively. During the dry season, the incoming sediments were ten times higher than the outgoing one. On an average the sediment yields were about 0.07 and 0.08 t ha-1 day-1 a week before and after fertilizing, respectively. Terraces having greater areas deposited more sediment than those with smaller sizes. During a week before and after first fertilizing, the total amounts of incoming sediments were 6.44 and 1.19 t ha-1 for the wet and dry seasons, while that of outgoing sediments were 1.89 and 0.14 t ha-1 for the wet and dry seasons, respectively. This indicates that terraced paddy fields are not only producing rice, but also providing environmental service in term of sediment trapping. This external service minimizes sedimentation in the downstream.<p> </p>


2016 ◽  
Author(s):  
N.J. Cowan ◽  
P.E. Levy ◽  
D. Famulari ◽  
M. Anderson ◽  
J. Drewer ◽  
...  

Abstract. Intensively managed grass production in high rainfall temperate climate zones is a globally important source of N2O. Many of these grasslands are occasionally tilled and can lead to increased N2O emissions. This was investigated by comparing N2O fluxes from two adjacent intensively managed grazed grasslands in Scotland, one of which was tilled. A combination of eddy covariance, high resolution dynamic chamber and static chamber methods greatly improved the temporal and spatial coverage of N2O fluxes before and after the tillage event and is recommended to be followed in future studies. Total cumulative fluxes calculated for the tilled and un-tilled fields over the 175 day measurement period were 2.45 ± 0.27 and 2.08 ± 0.23 kg N2O-N ha−1, respectively. N2O emissions from the tilled field increased significantly for several days immediately after ploughing and remained elevated for approximately two months after the tillage event contributing to an estimated increase in N2O fluxes of 1.08 ± 0.14 kg N2O-N ha−1. Cumulative fluxes calculated over a 28 day period in August after the application of 70 kg-N ha−1 as ammonium nitrate to both fields were estimated at 0.42 ± 0.15 and 0.75 ± 0.14 kg N2O N ha−1 for the tilled and un-tilled fields, respectively. The tillage event appears to have substantially increased N2O fluxes from the tilled grassland field over a two month period; however, this increase may have been fractionally offset by a decrease in emissions after the August fertilisation event.


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