O-123 Calibration of artificial intelligence (AI) models is necessary to reflect actual implantation probabilities with image-based embryo selection

2021 ◽  
Vol 36 (Supplement_1) ◽  
Author(s):  
M F Kragh ◽  
J T Lassen ◽  
J Rimestad ◽  
J Berntsen

Abstract Study question Do AI models for embryo selection provide actual implantation probabilities that generalise across clinics and patient demographics? Summary answer AI models need to be calibrated on representative data before providing reasonable agreements between predicted scores and actual implantation probabilities. What is known already AI models have been shown to perform well at discriminating embryos according to implantation likelihood, measured by area under curve (AUC). However, discrimination performance does not relate to how models perform with regards to predicting actual implantation likelihood, especially across clinics and patient demographics. In general, prediction models must be calibrated on representative data to provide meaningful probabilities. Calibration can be evaluated and summarised by “expected calibration error” (ECE) on score deciles and tested for significant lack of calibration using Hosmer-Lemeshow goodness-of-fit. ECE describes the average deviation between predicted probabilities and observed implantation rates and is 0 for perfect calibration. Study design, size, duration Time-lapse embryo videos from 18 clinics were used to develop AI models for prediction of fetal heartbeat (FHB). Model generalisation was evaluated on clinic hold-out models for the three largest clinics. Calibration curves were used to evaluate the agreement between AI-predicted scores and observed FHB outcome and summarised by ECE. Models were evaluated 1) without calibration, 2) calibration (Platt scaling) on other clinics’ data, and 3) calibration on the clinic’s own data (30%/70% for calibration/evaluation). Participants/materials, setting, methods A previously described AI algorithm, iDAScore, based on 115,842 time-lapse sequences of embryos, including 14,644 transferred embryos with known implantation data (KID), was used as foundation for training hold-out AI models for the three largest clinics (n = 2,829;2,673;1,327 KID embryos), such that their data were not included during model training. ECEs across the three clinics (mean±SD) were compared for models with/without calibration using KID embryos only, both overall and within subgroups of patient age (<36,36-40,>40 years). Main results and the role of chance The AUC across the three clinics was 0.675±0.041 (mean±SD) and unaffected by calibration. Without calibration, overall ECE was 0.223±0.057, indicating weak agreements between scores and actual implantation rates. With calibration on other clinics’ data, overall ECE was 0.040±0.013, indicating considerable improvements with moderate clinical variation. As implantation probabilities are both affected by clinical practice and patient demographics, subgroup analysis was conducted on patient age (<36,36-40,>40 years). With calibration on other clinics’ data, age-group ECEs were (0.129±0.055 vs. 0.078±0.033 vs. 0.072±0.015). These calibration errors were thus larger than the overall average ECE of 0.040, indicating poor generalisation across age. Including age as input to the calibration, age-group ECEs were (0.088±0.042 vs. 0.075±0.046 vs. 0.051±0.025), indicating improved agreements between scores and implantation rates across both clinics and age groups. With calibration including age on the clinic’s own data, however, the best calibrations were obtained with ECEs (0.060±0.017 vs. 0.040±0.010 vs. 0.039±0.009). The results indicate that both clinical practice and patient demographics influence calibration and thus ideally should be adjusted for. Testing lack of calibration using Hosmer-Lemeshow goodness-of-fit, only one age-group from one clinic appeared miscalibrated (P = 0.02), whereas all other age-groups from the three clinics were appropriately calibrated (P > 0.10). Limitations, reasons for caution In this study, AI model calibration was conducted based on clinic and age. Other patient metadata such as BMI and patient diagnosis may be relevant to calibrate as well. However, for both calibration and evaluation on the clinic’s own data, a substantiate amount of data for each subgroup is needed. Wider implications of the findings With calibrated scores, AI models can predict actual implantation likelihood for each embryo. Probability estimates are a strong tool for patient communication and clinical decisions such as deciding when to discard/freeze embryos. Model calibration may thus be the next step in improving clinical outcome and shortening time to live birth. Trial registration number This work is partly funded by the Innovation Fund Denmark (IFD) under File No. 7039-00068B and partly funded by Vitrolife A/S

2019 ◽  
Vol 32 (1) ◽  
pp. 251-258 ◽  
Author(s):  
Francisco Arthur Arré ◽  
José Elivalto Guimarães Campelo ◽  
José Lindenberg Rocha Sarmento ◽  
Luiz Antônio Silva Figueiredo Filho ◽  
Diego Helcias Cavalcante

ABSTRACT The objective of this study was to determine the optimum age at last weighing and compare the goodness of fit of nonlinear models used to fit longitudinal weight-age data to describe the growth pattern of Anglo-Nubian does. Weights of 104 animals from birth to 60 months of age were grouped into 10 age groups at six-month intervals. In each age group, parameters A (asymptotic weight), B (integration constant), and K (maturity index) were estimated using the Brody, Gompertz, logistic, and von Bertalanffy models. Data were analyzed using analysis of variance in a factorial design (10 age groups × 4 nonlinear models). The age group × model interaction was not significant. Mean estimates of A, B, and K were significantly different between age groups up to 30 months (p < 0.05), indicating that the estimated curve is affected by weights taken before this age independent of the model. The values of mean squared error (MSE), mean absolute deviation (MAD), coefficient of determination (R2) and Rate of convergence (RC) at each age group up to 30 months were compared to determine the goodness of fit of nonlinear models. The ranking of fit was logistic, Brody, von Bertalanffy, and Gompertz. The logistic and Brody models respectively estimated the smallest and largest asymptotic weight. Longitudinal weight records taken until 30 months of age are most appropriate for estimating the growth of Anglo-Nubian does using nonlinear models.


2020 ◽  
Vol 17 (3) ◽  
pp. 81-89 ◽  
Author(s):  
Nazafatul Ain ◽  
Saira Khan ◽  
Muhammad Marwat ◽  
Nisar Khan ◽  
Iftikhar Ahmad ◽  
...  

Background: Global Health Estimates 2015 has shown the stroke as second leading global cause of death and 3rd leading global cause for DALYs for year 2015. The objectives of this study were to determine the frequency, distribution and determinants of hypertension in adult stroke population of D.I.Khan Division, Pakistan. Materials & Methods: This cross-sectional study was conducted in Department of Community Medicine, Gomal Medical College, D.I.Khan, Pakistan from February 1, 2017 to April 30, 2017. A sample 217 was selected with margin of error 5.59%, 90%CL and 50% prevalence of hypertension in 200,000 adults at risk of stroke population through consecutive sampling. All indoor adult patients of stroke were eligible. Sex, age groups, and residence and presence of hypertension were variables. Frequency and distribution of hypertension were analyzed by count and percentage. Hypotheses for distribution were substantiated by chi-square goodness-of-fit and of association by chi-square test of association. Results: Out of 217 patients with stroke, 123 (56.7%) were men and 94 (43.3%) were women, 86 (39.6%) were≤60 years and 131 (60.4%) were>60 years, and 105 (48.4%) were urban and 112 (51.6%) were rural. Frequency of hypertension was 132/217 (60.83%). Out of 132 patients with hypertension, men were 74 (34.10%), women 58 (26.73%), age group≤60 years 46 (21.20%), >60 years 86 (39.63%), urban 72 (33.18%) and rural 60 (27.65%). Presence of hypertension was associated to residence (p=.023) but not to sex (p=.817) and age groups (p=.072). Conclusion: Frequency of hypertension in adult stroke population of D.I.Khan Division, Pakistan was found to be similar as expected. Frequency was more in men, in older age group (of>60years) and in urban population. The presence of hypertension in adult stroke population of D.I.Khan Division was associated to residence but not to sex and age groups.


2019 ◽  
Vol 17 (4) ◽  
pp. 131-143 ◽  
Author(s):  
Muhammad Marwat ◽  
Iftikhar Ahmad ◽  
Fariha Ashiq ◽  
Sania Ali ◽  
Sher Zamir ◽  
...  

Background: Global Health Estimates 2015 has shown IHD as second leading global cause of death and 3rd leading global cause for DALYs for 2015. The objectives of this study were to determine frequency, distribution and determinants of DM in adult acute coronary syndrome (ACS) population of D.I.Khan Division, Pakistan. Materials & Methods: This cross-sectional study was conducted in Departments of Ophthalmology & Community Medicine, Gomal Medical College, D.I.Khan, from February 1, 2017 to April 30, 2017. 331 cases were selected with margin of error 4.511%, 90%CL and 25% prevalence of DM in 73,438 adults assumed to have IHD. All indoor adult patients of ACS were eligible. Sex, age groups, and residence and presence of DM were variables. Frequency and distribution were analyzed by count and percentage. Hypotheses for distribution were substantiated by chi-square goodness-of-fit and of association by chi-square test of association. Results: Out of 331 patients with ACS, 225 (68.0%) were men and 106 (32.0%) women, 221 (66.8%) ≤60 years and 110 (33.2%) >60 years, and 210 (63.4%) urban and 121 (35.6%) rural. Frequency of DM was 79/331 (23.87%). Out of 79 patients with DM, men were 44 (13.29%), women 35 (10.57%), age group ≤60 years 57 (17.22%), >60 years 22 (6.65%), urban 53 (16.01%) and rural 60 (7.85%). Our prevalence of DM was lower than expected (p=.00214), our distribution by sex was similar to expected (p=.4993) while our distribution for age groups (p=.01209) and residence (p=.00005) were not similar to expected. Presence of DM was associated to sex (p=.011) but not to age groups (p=.0304) and residence (p=.5241). Conclusion: Prevalence of DM in adult ACS population of D.I.Khan Division, Pakistan was found lower than expected. The prevalence was more in men than women, more in younger age group (≤60 years) than older age group (>60 years) and more in urban than rural population. Our prevalence of DM was lower than expected, our distribution by sex was similar to expected while our distribution for age groups and residence were not similar to expected. The presence of DM was associated to sex but not to age groups and residence.


2019 ◽  
Vol 37 (7_suppl) ◽  
pp. 187-187 ◽  
Author(s):  
Frances May Mark ◽  
Adam Pollard ◽  
Alastair H Thomson

187 Background: Docetaxel use has led to a significant prolongation in overall survival in metastatic prostate cancer (MPC). There is however limited information on treatment tolerance and outcomes in patients 80 years old and over in routine clinical practice. With the ever aging population it is becoming more important to assess outcomes in this age group. Methods: Patients diagnosed with MPC and treated with docetaxel from 2006 to 2016 were identified and their records retrospectively reviewed via electronic clinical and prescribing systems in a single centre in the UK. Data was assessed for prostate specific antigen (PSA) response, number of cycles and dosing of docetaxel and castrate resistant overall survival (OS). Results: 209 consecutive patients with MPC receiving docetaxel were reviewed. Three patient groups were identified; younger than 75 years old (n = 150, 37 early (as part of initial therapy) docetaxel), 75-79 years (n = 40, 2 early docetaxel) and 80 years or over (n = 19, no early docetaxel). When comparing mean OS excluding early docetaxel treatment, respective mean survival times for each of the three age groups, younger to older were 1001, 1045 and 1294 days, with between class difference being insignificant. The PSA response rates to docetaxel excluding first line use were compared between the age groups and did not show a significant difference at 39% in the youngest group, 38% in the intermediate age group and 42% for the oldest patients. There was a trend that the older the patient, the more likely docetaxel was the final systemic treatment given at 42% (80 years or over), 32% (75-79 years) and 23% (younger than 75 years). The 80 years or over group received fewer docetaxel cycles (3.8, p = 0.006) and less dose per course (226mg/m2, p = 0.004) than the group less than 75 years (5.8 cycles, 409mg/m2) and 75-79 years (5.1 cycles, 341mg/m2). Conclusions: In this group of patients, in routine clinical practice, the 80 years and over age group received fewer cycles of docetaxel in MPC and less dose per course, but nevertheless achieved similar PSA response rates and castrate resistant OS. Given these results, docetaxel should be considered as a treatment option in suitable patients of 80 years and over.


Circulation ◽  
2020 ◽  
Vol 142 (Suppl_3) ◽  
Author(s):  
David Tofovic ◽  
Minji Seok ◽  
Logan S Schwarzman ◽  
Sreenivas Konda ◽  
Noreen T Nazir

Introduction: A disproportionate amount of COVID-19 infections has occurred in minority populations and in individuals with comorbid disease. We sought to evaluate the impact of patient demographics, cardiovascular disease (CVD), and known CVD risk factors on the incidence of COVID-19 infection. Methods: Between April 1st to May 1st, 2020, 844 adult patients (mean age 51.4±17.7 years, mean BMI 29.6±8.3, 50% male) admitted for any reason and tested for COVID-19 based on CDC criteria were studied in this large, metropolitan, single-center retrospective cohort analysis. Bivariate and multivariate analysis between patient demographics, CVD, and CVD risk factors with COVID-19 were evaluated. The nonlinear effects of age on COVID-19 test results were further analyzed. Results: Prevalence of COVID-19 was 21.7%. African Americans, Latinos, and Caucasian were 463(55%), 216(25%), 165(20%) respectively. Unadjusted, diabetes mellitus (DM) was significantly related with the COVID-19 positivity (OR 1.83, 95% CI 1.30-2.58, P=0.0005), but age adjusted DM was insignificant (OR 1.35, 95% CI 0.93-1.97, P=0.12). Similar results were found with other CVD risk factors (see Tables 1,2). Stratified analysis by age groups (18-40 years, ≥40 years), DM in the younger age group was the most significant risk factor for the COVID-19 positivity (OR 4.52, 95% CI 1.95-10.52, P=0.0002) but not in older inpatients (OR 1.23, 95% CI 0.85-1.81, P=0.2763). In the older age group, Latinos were significantly higher risk for COVID-19 compared to Caucasian (OR 2.27, 95% CI 1.26-4.07, P=0.005). Conclusions: Increased resources for testing in younger individuals with DM and the Hispanic population may be merited.


Water Policy ◽  
2015 ◽  
Vol 17 (6) ◽  
pp. 1045-1061 ◽  
Author(s):  
Sangeun Lee ◽  
Karina Vink

This study aimed to identify age groups vulnerable to flood fatalities and quantify their vulnerability by means of statistical methods. First, the study obtained data of 122 victims directly resulting from five flood disasters in the Philippines over the period 2010–2013 which was used to compare the number of flood fatalities in each age group with the population numbers. The chi-square goodness-of-fit test shows that only one age group, people aged ≥70, was vulnerable to flood fatalities. Vulnerabilities of people aged ≥70 and &lt;70, respectively, were quantified in terms of mortality, i.e., the ratio of flood fatalities and affected people. This study obtained two lognormal distribution curves moderately describing histograms built with samples on the mortality of the two age groups. Based on probabilistic parameters of the selected lognormal distribution curves, the study concludes that people aged ≥70 have more than three times the vulnerability to the risk of flood fatality than people aged &lt;70. It is also suggested that the age dependency ratio, which is widely used to consider demographic vulnerability in flood vulnerability studies, should not be applied to the Philippines.


2020 ◽  
Vol 18 (2) ◽  
pp. 45-53
Author(s):  
Ubed Ullah ◽  
Kiran Javed ◽  
Muhammad Asim Khan ◽  
Imran Ullah ◽  
Noor Ul Iman

Background: Escherichia coliresistance to ceftriaxone in UTIs is an emerging health problem.Our objectives were to determine prevalence, distribution and determinants of E. coliresistance to ceftriaxone in adult indoor UTI population of District Peshawar, Pakistan. Materials & Methods:This cross-sectional study was conducted in Department of Medicine, Khyber Teaching Hospital, Peshawar, Pakistan from 1st January 2017 to 30th June 2017. 380 UTIs cases were selected from population at riskconsecutively.Sex and age groups were demographic, while presence of E. coli resistance to ceftriaxone was research variable. All variables were nominal.Prevalenceand distribution were analyzed by count, percentage and confidence intervals for proportion for population. Hypotheses for distribution were substantiated by chi-square goodness-of-fit and of association by chi-square test of association. Results: Out of 380 patients with UTI, 136 (35.80%) were men,244(64.20%) women, 262 (68.95%) in age group 18-45 years and 118 (31.05%) in age group 46-65 years. Frequency/ prevalence of E. coli resistance was 287/380 (75.53%, 95%CI 71.20-79.85). Out of 287 patients with E. coli resistance to ceftriaxone, 101 (26.58%) were men and 186 (48.95%) women, 198 (52.11%) in age group 18-45 years and 89 (23.42%) in age group 46-65 years. Our prevalence of E. coli resistance to ceftriaxone was higher than expected (p<.00001), our distribution by sex(p<.00125) and age groups (p<.00001) were different than expected. Presence of E. coli resistance to ceftriaxone was not associated to sex (p=.669333) and age groups (p=.975097). Conclusion:Prevalence of E. coli resistance to ceftriaxone in adult UTI population of District Peshawar, Pakistan was alarmingly high 75.53%. Prevalence was more in women than men and more in younger age group (18-45 years) than older age group (46-60 years) population.Overall prevalence of E. coli resistance to ceftriaxone was higher than expected. Distribution by sex showed higher prevalence than expected in men and lower than expected in women, and higher than expected in younger age group and lower than expected in older age group. Presence of E. coli resistance to ceftriaxone was not associated to sex and age groups respectively in adult UTI population of District Peshawar, Pakistan.


2008 ◽  
Vol 2 (1) ◽  
pp. 20-25 ◽  
Author(s):  
Gabriel Coutinho ◽  
Paulo Mattos ◽  
Catia Araújo ◽  
Manuela Borges ◽  
Angela Alfano

Abstract Despite the importance of objective measures of attention to clinical practice, there is a paucity of Brazilian standardized tests. Objective: The aim of the present study was the standardization of a normative group for the third version of a computerized test of visual attention (TAVIS-3), developed to evaluate children and adolescents in the 6 to 17 years age range. Methods: 631 students from 3 schools in Rio de Janeiro city were assessed with TAVIS-3, administered by experienced psychologists, following parents' authorization. Results: The normative groups were determined considering performance of different age groups: from 6 to 10 years (with scores for 5 different ages); from 11 to 12 and from 13 to 17 years. Three tasks (focused, shifted and sustained attention) were standardized for each age group. Conclusion: The standardization of a normative group for TAVIS-3 discriminated performance ranges for distinct age groups, allowing its use as a neuropsychological assessment of attention.


2019 ◽  
Vol 22 (11) ◽  
pp. 2099-2109 ◽  
Author(s):  
Tafere Gebreegziabher ◽  
Nigatu Regassa

AbstractObjectiveTo examine the contribution of child, maternal and household factors in stunting, wasting and underweight among children under 5 years in Ethiopia.DesignQuantitative cross-sectional design based on nationally representative data.SettingUrban and rural areas of Ethiopia.ParticipantsYounger (0–24 months; n 4199) and older age groups (25–59 months; n 5497), giving a total of 9696 children.ResultsAmong the younger age group, 29 % were stunted, 14 % were wasted and 19 % were underweight; and among the older age group, the prevalence of stunting, wasting and underweight was 47, 8 and 28 %, respectively. Being female, intake of multiple micronutrients, household having a piped source of drinking-water, high maternal BMI, higher household wealth and higher maternal education were associated with decreased odds of at least one form of undernutrition in both groups. On the other hand, children who were anaemic, had low birth weight, drank from a bottle, and children of stunted or wasted or working mothers were more likely to be stunted, wasted or underweight in both groups (P<0·05). While most predictors and/or risk factors followed a similar pattern across the two age groups, child factors had higher leverage in the younger than the older group across the three forms of undernutrition.ConclusionsMultiple set of factors predicted childhood undernutrition in Ethiopia. The study underscores the importance of intervening in the first 1000 days through promoting maternal education, maternal–child health services, mother’s nutrition and improving intrahousehold food distribution.


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