scholarly journals Examining the occupancy-density relationship for a low density carnivore

2016 ◽  
Author(s):  
Daniel W. Linden ◽  
Angela K. Fuller ◽  
J. Andrew Royle ◽  
Matthew P. Hare

1. The challenges associated with monitoring low-density carnivores across large landscapes have limited the ability to implement and evaluate conservation and management strategies for such species. Noninvasive sampling techniques and advanced statistical approaches have alleviated some of these challenges and can even allow for spatially explicit estimates of density, arguably the most valuable wildlife monitoring tool. 2. For some species, individual identification comes at no cost when unique attributes (e.g., pelage patterns) can be discerned with remote cameras, while other species require viable genetic material and expensive lab processing for individual assignment. Prohibitive costs may still force monitoring efforts to use species distribution or occupancy as a surrogate for density, which may not be appropriate under many conditions. 3. Here, we used a large-scale monitoring study of fisherPekania pennantito evaluate the effectiveness of occupancy as an approximation to density, particularly for informing harvest management decisions. We used a combination of remote cameras and baited hair snares during 2013-2015 to sample across a 70,096 km2 region of western New York, USA. We fit occupancy and Royle-Nichols models to species detection-nondetection data collected by cameras, and spatial capture-recapture models to individual encounter data obtained by genotyped hair samples. 4. We found a close relationship between grid-cell estimates of fisher state variables from the models using detection-nondetection data and those from the SCR model, likely due to informative spatial covariates across a large landscape extent and a grid cell resolution that worked well with the movement ecology of the species. Spatially-explicit management recommendations for fisher were similar across models. We discuss design-based approaches to occupancy studies that can improve approximations to density.

2021 ◽  
Vol 14 (10) ◽  
pp. 6025-6047
Author(s):  
Onur Kerimoglu ◽  
Prima Anugerahanti ◽  
Sherwood Lan Smith

Abstract. Coupled physical–biogeochemical models can generally reproduce large-scale patterns of primary production and biogeochemistry, but they often underestimate observed variability and gradients. This is partially caused by insufficient representation of systematic variations in the elemental composition and pigment density of phytoplankton. Although progress has been made through approaches accounting for the dynamics of phytoplankton composition with additional state variables, formidable computational challenges arise when these are applied in spatially explicit setups. The instantaneous acclimation (IA) approach addresses these challenges by assuming that Chl:C:nutrient ratios are instantly optimized locally (within each modeled grid cell, at each time step), such that they can be resolved as diagnostic variables. Here, we present the first tests of IA in an idealized 1-D setup: we implemented the IA in the Framework for Aquatic Biogeochemical Models (FABM) and coupled it with the General Ocean Turbulence Model (GOTM) to simulate the spatiotemporal dynamics in a 1-D water column. We compare the IA model against a fully dynamic, otherwise equivalently acclimative (dynamic acclimation; DA) variant with an additional state variable and a third, non-acclimative and fixed-stoichiometry (FS) variant. We find that the IA and DA variants, which require the same parameter set, behave similarly in many respects, although some differences do emerge especially during the winter–spring and autumn–winter transitions. These differences however are relatively small in comparison to the differences between the DA and FS variants, suggesting that the IA approach can be used as a cost-effective improvement over a fixed-stoichiometry approach. Our analysis provides insights into the roles of acclimative flexibilities in simulated primary production and nutrient drawdown rates, seasonal and vertical distribution of phytoplankton biomass, formation of thin chlorophyll layers and stoichiometry of detrital material.


2021 ◽  
Author(s):  
Onur Kerimoglu ◽  
Prima Anugerahanti ◽  
Sherwood Lan Smith

Abstract. Coupled physical-biogeochemical models can generally reproduce large-scale patterns of primary production and biogeochemistry, but they often underestimate observed variability and gradients. This is partially caused by insufficient representation of systematic variations in the elemental composition and pigment density of phytoplankton. Although progress has been made through approaches accounting for the dynamics of phytoplankton composition with additional state variables, formidable computational challenges arise when these are applied in spatially explicit setups. The Instantaneous Acclimation (IA) approach addresses these challenges by assuming that Chl : C : nutrient ratios are instantly optimized locally (within each modelled grid cell, at each timestep), such that they can be resolved as diagnostic variables. Here we present the first tests of IA in an idealized, 1D setup: we implemented the IA in the Framework for Aquatic Biogeochemical Models (FABM), and coupled it with the General Ocean Turbulence Model (GOTM) to simulate the spatio-temporal dynamics in a 1-D water column. We show that the IA model and a fully dynamic, otherwise equivalently acclimative (DA) variant with an additional state variable behave similarly, and both resolve nutrient and growth dynamics not captured by a third, non-acclimative and fixed-stoichiometry (FS) variant.


2021 ◽  
Vol 13 (3) ◽  
pp. 1158
Author(s):  
Cecilia M. Onyango ◽  
Justine M. Nyaga ◽  
Johanna Wetterlind ◽  
Mats Söderström ◽  
Kristin Piikki

Opportunities exist for adoption of precision agriculture technologies in all parts of the world. The form of precision agriculture may vary from region to region depending on technologies available, knowledge levels and mindsets. The current review examined research articles in the English language on precision agriculture practices for increased productivity among smallholder farmers in Sub-Saharan Africa. A total of 7715 articles were retrieved and after screening 128 were reviewed. The results indicate that a number of precision agriculture technologies have been tested under SSA conditions and show promising results. The most promising precision agriculture technologies identified were the use of soil and plant sensors for nutrient and water management, as well as use of satellite imagery, GIS and crop-soil simulation models for site-specific management. These technologies have been shown to be crucial in attainment of appropriate management strategies in terms of efficiency and effectiveness of resource use in SSA. These technologies are important in supporting sustainable agricultural development. Most of these technologies are, however, at the experimental stage, with only South Africa having applied them mainly in large-scale commercial farms. It is concluded that increased precision in input and management practices among SSA smallholder farmers can significantly improve productivity even without extra use of inputs.


Animals ◽  
2019 ◽  
Vol 9 (10) ◽  
pp. 724
Author(s):  
Noack ◽  
Heyns ◽  
Rodenwoldt ◽  
Edwards

The establishment of enclosed conservation areas are claimed to be the driving force for the long-term survival of wildlife populations. Whilst fencing provides an important tool in conservation, it simultaneously represents a controversial matter as it stops natural migration processes, which could ultimately lead to inbreeding, a decline in genetic diversity and local extinction if not managed correctly. Thus, wildlife residing in enclosed reserves requires effective conservation and management strategies, which are strongly reliant on robust population estimates. Here, we used camera traps combined with the relatively new class of spatially explicit capture-recaptured models (SECR) to produce the first reliable leopard population estimate for an enclosed reserve in Namibia. Leopard density was estimated at 14.51 leopards/100 km2, the highest recorded density in Namibia to date. A combination of high prey abundance, the absence of human persecution and a lack of top-down control are believed to be the main drivers of the recorded high leopard population. Our results add to the growing body of literature which suggests enclosed reserves have the potential to harbour high densities and highlight the importance of such reserves for the survival of threatened species in the future.


2021 ◽  
Vol 53 (1) ◽  
Author(s):  
Martin Johnsson ◽  
Andrew Whalen ◽  
Roger Ros-Freixedes ◽  
Gregor Gorjanc ◽  
Ching-Yi Chen ◽  
...  

Abstract Background Meiotic recombination results in the exchange of genetic material between homologous chromosomes. Recombination rate varies between different parts of the genome, between individuals, and is influenced by genetics. In this paper, we assessed the genetic variation in recombination rate along the genome and between individuals in the pig using multilocus iterative peeling on 150,000 individuals across nine genotyped pedigrees. We used these data to estimate the heritability of recombination and perform a genome-wide association study of recombination in the pig. Results Our results confirmed known features of the recombination landscape of the pig genome, including differences in genetic length of chromosomes and marked sex differences. The recombination landscape was repeatable between lines, but at the same time, there were differences in average autosome-wide recombination rate between lines. The heritability of autosome-wide recombination rate was low but not zero (on average 0.07 for females and 0.05 for males). We found six genomic regions that are associated with recombination rate, among which five harbour known candidate genes involved in recombination: RNF212, SHOC1, SYCP2, MSH4 and HFM1. Conclusions Our results on the variation in recombination rate in the pig genome agree with those reported for other vertebrates, with a low but nonzero heritability, and the identification of a major quantitative trait locus for recombination rate that is homologous to that detected in several other species. This work also highlights the utility of using large-scale livestock data to understand biological processes.


Polymers ◽  
2021 ◽  
Vol 13 (7) ◽  
pp. 1094
Author(s):  
Bastian Klose ◽  
Daniel Kremer ◽  
Merve Aksit ◽  
Kasper P. van der Zwan ◽  
Klaus Kreger ◽  
...  

Polystyrene foams have become more and more important owing to their lightweight potential and their insulation properties. Progress in this field is expected to be realized by foams featuring a microcellular morphology. However, large-scale processing of low-density foams with a closed-cell structure and volume expansion ratio of larger than 10, exhibiting a homogenous morphology with a mean cell size of approximately 10 µm, remains challenging. Here, we report on a series of 4,4′-diphenylmethane substituted bisamides, which we refer to as kinked bisamides, acting as efficient supramolecular foam cell nucleating agents for polystyrene. Self-assembly experiments from solution showed that these bisamides form supramolecular fibrillary or ribbon-like nanoobjects. These kinked bisamides can be dissolved at elevated temperatures in a large concentration range, forming dispersed nano-objects upon cooling. Batch foaming experiments using 1.0 wt.% of a selected kinked bisamide revealed that the mean cell size can be as low as 3.5 µm. To demonstrate the applicability of kinked bisamides in a high-throughput continuous foam process, we performed foam extrusion. Using 0.5 wt.% of a kinked bisamide yielded polymer foams with a foam density of 71 kg/m3 and a homogeneous microcellular morphology with cell sizes of ≈10 µm, which is two orders of magnitude lower compared to the neat polystyrene reference foam with a comparable foam density.


2010 ◽  
Vol 48 (1) ◽  
pp. 47-55 ◽  
Author(s):  
Max Post van der Burg ◽  
Bartholomew Bly ◽  
Tammy VerCauteren ◽  
Andrew J. Tyre

2021 ◽  
Author(s):  
Juan Daniel Rios-Arboleda

<p>This research expands the original analysis of Baker and Costa (1987) including data from Europe and South America with the objective to understand if there are emerging latitudinal patterns. In addition, the threshold proposed by Zimmermann et al. (1997) it is evaluated with the data from tropical zones finding that this is a good predictor.</p><p>Mainly, recent Debris Flow occurred in South America are analyzed with the aim of identifying the best risk management strategies and their replicability for developing countries, particularly, the cases that have occurred in Colombia and Venezuela in the last 30 years are analyzed in order to compare management strategies and understand which are the most vulnerable areas to this phenomenon.</p><p>It is concluded that large-scale and multinational projects such as SED ALP are required in South America to better characterize events that have left multiple fatalities (sometimes hundreds of people) and better understand how to manage the risk on densely populated areas.</p><p>Finally, the use of amateur videos is proposed to characterize these events in nations with limited budgets for projects such as SED ALP, methodology that will be described extensively in later works.</p>


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