Aged and Young Mice Differentially Respond to Tape‐Stripping in Epidermal Gene Expression

2021 ◽  
Author(s):  
Si Wen ◽  
Li Ye ◽  
Xiaohua Wang ◽  
Dan Liu ◽  
Bin Yang ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Constantinos G. Broustas ◽  
Axel J. Duval ◽  
Sally A. Amundson

AbstractAs a radiation biodosimetry tool, gene expression profiling is being developed using mouse and human peripheral blood models. The impact of dose, dose-rate, and radiation quality has been studied with the goal of predicting radiological tissue injury. In this study, we determined the impact of aging on the gene expression profile of blood from mice exposed to radiation. Young (2 mo) and old (21 mo) male mice were irradiated with 4 Gy x-rays, total RNA was isolated from whole blood 24 h later, and subjected to whole genome microarray analysis. Pathway analysis of differentially expressed genes revealed young mice responded to x-ray exposure by significantly upregulating pathways involved in apoptosis and phagocytosis, a process that eliminates apoptotic cells and preserves tissue homeostasis. In contrast, the functional annotation of senescence was overrepresented among differentially expressed genes from irradiated old mice without enrichment of phagocytosis pathways. Pathways associated with hematologic malignancies were enriched in irradiated old mice compared with irradiated young mice. The fibroblast growth factor signaling pathway was underrepresented in older mice under basal conditions. Similarly, brain-related functions were underrepresented in unirradiated old mice. Thus, age-dependent gene expression differences should be considered when developing gene signatures for use in radiation biodosimetry.



Blood ◽  
2006 ◽  
Vol 108 (11) ◽  
pp. 1421-1421
Author(s):  
Weili Chen ◽  
Ashish R. Kumar ◽  
Wendy A. Hudson ◽  
Quanzhi Li ◽  
John H. Kersey

Abstract The relative importance of the major hematopoietic progenitor/stem cell populations in MLL fusion gene leukemias remains largely undefined. Several studies have demonstrated that retrovirally transformed populations will produce leukemia in mice. However, because the levels of gene expression are known to alter cellular effects and MLL fusion gene expression in previous studies is generally supraphysiologic, uncontrolled and variable, comparison of individual population is difficult. In this study, we used knock-in mice with the fusion gene inserted in the genomic DNA by homologous recombination as an alternative model, permitting study of cells in which the fusion gene is under the control of the endogenous promoter and thus expressed at physiological levels in all progenitor/stem cells. Such knock-in cells also have the advantage that there is haploinsufficiency of the Mll gene expression which may be important in cellular dysfunction. Mll-AF9 knock-in mice develop myeloproliferation as early as 6 days of age and develop myeloproliferative disease-like (MPD-like) myeloid leukemia after six months latency. We postulated that Mll-AF9 induced deregulation would result in progenitor cells with quantifiably different biologic properties. In this study, we evaluated marrow progenitor/stem cells from young mice before leukemia development. Wild type or Mll-AF9 marrow cells from 3–6 young mice (8 weeks old) were sorted into HSC, CLP, CMP and GMP populations using standard protocols and grown in methylcellulose medium containing IL-3, IL-6, SCF, and GM-CSF. After 7 days’ culture, 3.6 fold more myeloid colonies were found in GMP and 2.5 fold more in CMP groups from Mll-AF9 compared to WT mice. After the third plating generation (21 days in culture), a very different pattern emerged. As expected, only rare colonies were found from WT mice whereas Mll-AF9 HSC and CLP groups resulted in significantly more myeloid colonies (60.1±5.5 and 67.5±10.5, respectively) than the CMP and GMP groups (27.2±3.8 and 20.9±4.1, respectively). Dense compact (Type I) colonies composed of immature myeloid cell were frequent in the Mll-AF9 HSC and CLP groups. Two-dimensional Sca-1 and c-kit plots showed that Mll-AF9 resulted in increases from a mean of 6.4% to 12.9% in HSCs and 12.4 to 27.3% in CLPs. Remarkably, Mll-AF9 CLP day 7 cultures had notably high number of CD11b+Gr1+ cells (mean of 57%). Mll-AF9 CLPs cultured under myeloid conditions also showed mixed lineage characteristics: expression of myeloid genes (GM-CSF receptor, c-fms, and lysozyme) and early B lymphoid genes (IL-7 receptor, TdT but not PAX5) and D-J rearrangement. In summary, our results show that Mll-AF9, when expressed at physiologic levels, reprograms progenitor/stem cells from young mice months before development of leukemia. CLPs are remarkable because in contrast to lymphoid restricted wild type CLPs, Mll-AF9 CLPs are mixed lineage in phenotype. Mll-AF9 resulted in increased self-renewal in all four HSC, CLP, CMP, and GMP populations compared with WT populations. However, importantly, in Mll-AF9 mice, self-renewal was most enhanced in cells with more intrinsic self-renewal potential and/or more evidence of reprogramming (HSCs, CLPs) than in committed myeloid progenitors. A predicted consequence of these differences is that cells with the highest Mll-AF9 induced self-renewal (HSCs, CLPs) will be more efficient than transformed CMPs and GMPs in inducing leukemia.



2020 ◽  
Vol 16 ◽  
pp. 174480692097191
Author(s):  
Jack A Mayhew ◽  
Mitchell J Cummins ◽  
Ethan T Cresswell ◽  
Robert J Callister ◽  
Doug W Smith ◽  
...  

Clinically, pain has an uneven incidence throughout lifespan and impacts more on the elderly. In contrast, preclinical models of pathological pain have typically used juvenile or young adult animals to highlight the involvement of glial populations, proinflammatory cytokines, and chemokines in the onset and maintenance of pathological signalling in the spinal dorsal horn. The potential impact of this mismatch is also complicated by the growing appreciation that the aged central nervous system exists in a state of chronic inflammation because of enhanced proinflammatory cytokine/chemokine signalling and glial activation. To address this issue, we investigated the impact of aging on the expression of genes that have been associated with neuropathic pain, glial signalling, neurotransmission and neuroinflammation. We used qRT-PCR to quantify gene expression and focussed on the dorsal horn of the spinal cord as this is an important perturbation site in neuropathic pain. To control for global vs region-specific age-related changes in gene expression, the ventral half of the spinal cord was examined. Our results show that expression of proinflammatory chemokines, pattern recognition receptors, and neurotransmitter system components was significantly altered in aged (24–32 months) versus young mice (2–4 months). Notably, the magnitude and direction of these changes were spinal-cord region dependent. For example, expression of the chemokine, Cxcl13, increased 119-fold in dorsal spinal cord, but only 2-fold in the ventral spinal cord of old versus young mice. Therefore, we propose the dorsal spinal cord of old animals is subject to region-specific alterations that prime circuits for the development of pathological pain, potentially in the absence of the peripheral triggers normally associated with these conditions.



2017 ◽  
Vol 86 (2) ◽  
pp. e14 ◽  
Author(s):  
Punyada Suchiva ◽  
Toshiro Takai ◽  
Hideo Iida ◽  
Sakiko Shimura ◽  
Hirono Ochi ◽  
...  


Microbiome ◽  
2021 ◽  
Vol 9 (1) ◽  
Author(s):  
Jason W. Arnold ◽  
Jeffery Roach ◽  
Salvador Fabela ◽  
Emily Moorfield ◽  
Shengli Ding ◽  
...  

Abstract Background Prebiotic galacto-oligosaccharides (GOS) have an extensively demonstrated beneficial impact on intestinal health. In this study, we determined the impact of GOS diets on hallmarks of gut aging: microbiome dysbiosis, inflammation, and intestinal barrier defects (“leaky gut”). We also evaluated if short-term GOS feeding influenced how the aging gut responded to antibiotic challenges in a mouse model of Clostridioides difficile infection. Finally, we assessed if colonic organoids could reproduce the GOS responder—non-responder phenotypes observed in vivo. Results Old animals had a distinct microbiome characterized by increased ratios of non-saccharolytic versus saccharolytic bacteria and, correspondingly, a lower abundance of β-galactosidases compared to young animals. GOS reduced the overall diversity, increased the abundance of specific saccharolytic bacteria (species of Bacteroides and Lactobacillus), increased the abundance of β-galactosidases in young and old animals, and increased the non-saccharolytic organisms; however, a robust, homogeneous bifidogenic effect was not observed. GOS reduced age-associated increased intestinal permeability and increased MUC2 expression and mucus thickness in old mice. Clyndamicin reduced the abundance Bifidobacterium while increasing Akkermansia, Clostridium, Coprococcus, Bacillus, Bacteroides, and Ruminococcus in old mice. The antibiotics were more impactful than GOS on modulating serum markers of inflammation. Higher serum levels of IL-17 and IL-6 were observed in control and GOS diets in the antibiotic groups, and within those groups, levels of IL-6 were higher in the GOS groups, regardless of age, and higher in the old compared to young animals in the control diet groups. RTqPCR revealed significantly increased gene expression of TNFα in distal colon tissue of old mice, which was decreased by the GOS diet. Colon transcriptomics analysis of mice fed GOS showed increased expression of genes involved in small-molecule metabolic processes and specifically the respirasome in old animals, which could indicate an increased oxidative metabolism and energetic efficiency. In young mice, GOS induced the expression of binding-related genes. The galectin gene Lgals1, a β-galactosyl-binding lectin that bridges molecules by their sugar moieties and is an important modulator of the immune response, and the PI3K-Akt and ECM-receptor interaction pathways were also induced in young mice. Stools from mice exhibiting variable bifidogenic response to GOS injected into colon organoids in the presence of prebiotics reproduced the response and non-response phenotypes observed in vivo suggesting that the composition and functionality of the microbiota are the main contributors to the phenotype. Conclusions Dietary GOS modulated homeostasis of the aging gut by promoting changes in microbiome composition and host gene expression, which was translated into decreased intestinal permeability and increased mucus production. Age was a determining factor on how prebiotics impacted the microbiome and expression of intestinal epithelial cells, especially apparent from the induction of galectin-1 in young but not old mice.



2021 ◽  
Vol 18 (1) ◽  
Author(s):  
Rachel H McMahan ◽  
Kevin M Najarro ◽  
Juliet E Mullen ◽  
Madison T Paul ◽  
David J Orlicky ◽  
...  

Abstract Background There are currently > 600 million people over the age of 65 globally and this number is expected to double by the year 2050. Alcohol use among this population is on the rise, which is concerning as aging is associated with increased risk for a number of chronic illnesses. As most studies investigating the effects of alcohol have focused on young/middle-aged populations, there is a dearth of information regarding the consequences of alcohol use in older consumers. In addition, most murine ethanol models have concentrated on exposure to very high levels of ethanol, while the vast majority of elderly drinkers do not consume alcohol in excess; instead, they drink on average 2 alcoholic beverages a day, 3–4 days a week. Methods We designed a murine model of aging and moderate ethanol consumption to determine if the deleterious effects of alcohol on the gut-liver axis are exacerbated in aged, relative to younger, animals. Aged and young mice were exposed to a multi-day moderate exposure ethanol regimen for 4 weeks and changes in gut permeability along with intestinal tight junction protein and antimicrobial peptide gene expression were measured. In addition, hepatic inflammation was assessed by histological analysis, inflammatory gene expression and flow cytometric analysis of inflammatory infiltrate. Results Our results reveal that in aged, but not young mice, moderate ethanol exposure yielded significantly worsened intestinal permeability, including increased bacterial translocation from the gut, elevated serum iFABP and leakage of FITC-dextran from the gut. Interestingly, moderate ethanol exposure in young animals led to gut protective transcriptional changes in the ileum while this protective response was blunted in aged mice. Finally, moderate ethanol exposure in aged mice also resulted in marked inflammatory changes in the liver. Conclusions These results demonstrate that aged mice are more susceptible to ethanol-induced gut barrier dysfunction and liver inflammation, even at moderate doses of ethanol. This increased vulnerability to ethanol’s gastrointestinal effects has important implications for alcohol use in the aging population. Future studies will explore whether improving intestinal barrier function can reverse these age-related changes.



2010 ◽  
Vol 104 (1) ◽  
pp. 24-30 ◽  
Author(s):  
Julia Sauer ◽  
Hyeran Jang ◽  
Ella M. Zimmerly ◽  
Kyong-chol Kim ◽  
Zhenhua Liu ◽  
...  

Older age, dietary folate and chronic alcohol consumption are important risk factors for the development of colon cancer. The present study examined the effects of ageing, folate and alcohol on genomic and p16-specific DNA methylation, and p16 expression in the murine colon. Old (aged 18 months; n 70) and young (aged 4 months; n 70) male C57BL/6 mice were pair-fed either a Lieber-DeCarli liquid diet with alcohol (18 % of energy), a Lieber-DeCarli diet with alcohol (18 %) and reduced folate (0·25 mg folate/l) or an isoenergetic control diet (0·5 mg folate/l) for 5 or 10 weeks. Genomic DNA methylation, p16 promoter methylation and p16 gene expression were analysed by liquid chromatography–MS, methylation-specific PCR and real-time RT-PCR, respectively. Genomic DNA methylation was lower in the colon of old mice compared with young mice (P < 0·02) at 10 weeks. Alcohol consumption did not alter genomic DNA methylation in the old mouse colon, whereas it tended to decrease genomic DNA methylation in young mice (P = 0·08). p16 Promoter methylation and expression were higher in the old mouse colon compared with the corresponding young groups. There was a positive correlation between p16 promoter methylation and p16 expression in the old mouse colon (P < 0·02). In young mice the combination of alcohol and reduced dietary folate led to significantly decreased p16 expression compared with the control group (P < 0·02). In conclusion, ageing and chronic alcohol consumption alter genomic DNA methylation, p16 promoter methylation and p16 gene expression in the mouse colon, and dietary folate availability can further modify the relationship with alcohol in the young mouse.



2020 ◽  
Vol 158 (6) ◽  
pp. S-63-S-64
Author(s):  
Elizabeth J. Videlock ◽  
Asa Hatami ◽  
Chunni Zhu ◽  
Han Chen ◽  
Jill M. Hoffman ◽  
...  


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