Detection of biodiversity local centers and gradients of change of Dolichopodidae (Diptera) in East Asia

2021 ◽  
Vol 28 (1) ◽  
Author(s):  
IGOR GRICHANOV ◽  
MARIYA CHURSINA ◽  
MENGQING WANG
Keyword(s):  
Cluster Analysis ◽  
East Asia ◽  
Mathematical Analysis ◽  
East Asian ◽  
Species Number ◽  
Russian Regions ◽  
Biodiversity Indices ◽  
Group A ◽  
Group B ◽  
Total Species

The dolichopodid fauna of continental Chinese and Russian regions belonging to the East Palaearctic have been selected for a comparative diversity investigation. We gathered information about 654 species of long-legged flies in the studied areas. Regarding the total species number, Primorsky Kray and Republic of Sakha in Russia, Henan and Shaanxi in China, as well as Mongolia are the top five regions, each with more than 100 species known. Cluster analysis of the dolichopodid genera composition allows us to divide all studied territories into two groups: Group A is mixed, since it includes both the Russian regions and the Chinese provinces; Group B includes only Russian regions. Generally, the mathematical analysis of the dolichopodid species supports the uniqueness of Primorsky Kray as the biodiversity center in East Asian Palaearctic. A decrease in the number of known species and biodiversity indices is observed northward, southward and westward of Primorsky Kray. One more possible center is located closely to the Oriental provinces of China (Henan and Shaanxi provinces).

scholarly journals First report on phytoplankton communities of Barishal City, Bangladesh

2020 ◽  
pp. 142-147
Author(s):  
Shaswati Chakraborty ◽  
Dipalok Karmaker ◽  
Subroto Kumar Das ◽  
Riyad Hossen
Keyword(s):  
Aquatic Ecosystems ◽  
Species Number ◽  
Aquatic Environments ◽  
Primary Producers ◽  
First Report ◽  
Biodiversity Indices ◽  
Phytoplankton Communities ◽  
Living Organisms ◽  
The City ◽  
Total Species

Phytoplanktons, also called microalgae, are microscopic photosynthetic living organisms that generally found in aquatic environments. Although they are considered as the most important primary producers and bioindicators of aquatic ecosystems, there was no previous report found for Barishal City about these tiny organisms. Consequently, the present study selected 10 freshwater reservoirs from the city to investigate phytoplankton communities and listed 110 taxa under 4 phyla, 7 classes, 18 orders, 24 families and 49 genera. The distribution of Chlorophytes was abundant relatively in terms of species number (45 taxa) followed by Euglenophytes, Chlorophytes and Cyanophytes in this area. Only Euglenaceae possessed one-third of the total species of this report. Among all stations, the highest number of taxa was recorded from station 2 and according to nine biodiversity indices, the station 2 and 9 showed comparatively good results. All of the recorded taxa were previously mentioned by different authors from Bangladesh.

scholarly journals The Estimation of the Degree of Genetic Divergence Using Cluster Analysis of the Varietiesof Wheat

2018 ◽  
Vol 7 (2) ◽  
pp. 112-122
Author(s):  
Riyadh Jabbar Mansour al-Maliki
Keyword(s):  
Cluster Analysis ◽  
Triticum Aestivum L ◽  
Genetically Engineered ◽  
Yield Data ◽  
Local Varieties ◽  
Homogeneous Groups ◽  
Group A ◽  
Group B ◽  
Degree Of Similarity ◽  
Made In

A field experiment has beencarried out at eight different environmental sites in the province of Diwaniya for seasonal years in 2014 and 2015 to test nine varieties of different origin wheat (Triticum aestivum L) and assembled in homogeneous groups and assess the degree of divergence between them and estimate distances Euclidean using cluster analysis. The grain yield data analysis using hierarchical consolidation method (hierarchical) after it has been estimating the degree of similarity by creating a matrix of proximities. The result of the cluster analysis to combine items in five groups formed during the ten stages is every group consists of  two varieties  except the fifth group  consists of one variety. The results of cluster analysis shows that cultivars sabah  and Iba 99 have the most similarity the  highest distance Euclidean This refers to the similarity of genes that control the yield  grains, which indicate that the degree of divergence of genetic height and reflects the positive to perform tow variety  and they possess some of the majorfavorite genes and crosses to take advantage of them in education programs, while Ibahas got less Euclidean distance Maxibak of the variety, which shows a genetic dimension of this product may be due to the different genetic origins. Varieties aredistributed to two main groups: the first group (A) includesvariety  (4 and 5) while the second group (B) the rest of the totals and characterized by the average of the sum which is higher including than the first group when is an indication of the existence of favoritesgenes segregated  for a recipe made in the categories for the second group which can benefit from segregation. divergent varieties genetically engineered can be used to improve the local varieties by transferring genes winning one of the superior ways of education breeding because the spacing will ensure that genetic similarity between genes tested varieties.

scholarly journals The Vulvar Immunohistochemical Panel (VIP) Project: Molecular Profiles of Vulvar Squamous Cell Carcinoma

Cancers ◽  
2021 ◽  
Vol 13 (24) ◽  
pp. 6373
Author(s):  
Giorgia Garganese ◽  
Frediano Inzani ◽  
Simona Maria Fragomeni ◽  
Giulia Mantovani ◽  
Luigi Della Corte ◽  
...  
Keyword(s):  
Cluster Analysis ◽  
Squamous Cell Carcinoma ◽  
Cell Carcinoma ◽  
Squamous Cell ◽  
Primary Tumor ◽  
Vulvar Squamous Cell Carcinoma ◽  
Egfr Expression ◽  
Group A ◽  
Molecular Profiles ◽  
Group B

Introduction: The study’s aim was to investigate the immunohistochemical (IHC) expression of biological markers as potential prognostic/therapeutic factors in vulvar squamous cell carcinoma (VSCC). Methodology: A series of 101 patients surgically treated at our center from 2016 to 2020 were retrospectively enrolled: 53 node-negative (Group A) and 48 node-positive (Group B). A total of 146 samples, 101 from primary tumor (T) and 45 from nodal metastases (N), were investigated. The IHC panel included: p16, p53, MLH1, MSH2, MSH6, PMS2, PD-L1, CD3, HER2/neu, ER, PR, EGFR, VEGF, and CD31. The reactions were evaluated on qualitative and semi-quantitative scales. Generalized Linear Model (GLM) and cluster analysis were performed in R statistical environment. A distance plot compared the IHC panel of T with the correspondent N. Results: In Group A: p16-positive expression (surrogate of HPV-dependent pathway) was significantly higher (20.8% vs. 6.2%, p = 0.04). In Group B: PD-L1 positivity and high EGFR expression were found, respectively, in 77.1% and 97.9% patients (T and/or N). Overall, p16-negative tumors showed a higher PD-L1 expression (60.9% vs. 50.0%). In both groups: tumoral immune infiltration (CD3 expression) was mainly moderate/intense (80% vs. 95%); VEGF showed strong/moderate-diffuse expression in 13.9% of T samples; CD31, related to tumoral microvessel density (MVD), showed no difference between groups; a mutated p53 and over-expressed PD-L1 showed significant association with nodal metastasis, with Odds Ratios (OR) of 4.26 (CI 95% = 1.14–15.87, p = 0.03) and 2.68 (CI 95% = 1.0–7.19, p < 0.05), respectively; since all mismatch repair proteins (MMR) showed a retained expression and ER, PR, and HER2/neu were negative, they were excluded from further analysis. The cluster analysis identified three and four sub-groups of molecular profiles, respectively, in Group A and B, with no difference in prognosis. The molecular signature of each N and corresponding T diverged significantly in 18/41 (43.9%) cases. Conclusions: Our results support a potential role of immune checkpoint inhibitors and anti-VEGF and anti-EGFR drugs especially in patients with worse prognosis (metastatic, HPV-independent). A panel including EGFR, VEGF, PDL1, p16, and p53 might be performed routinely in primary tumor and repeated in case of lymph node metastases to identify changes in marker expression.

scholarly journals Asymmetric Hybridization and Sex-Biased Gene Flow Between Eastern Spot-Billed Ducks (Anas Zonorhyncha) and Mallards (A. Platyrhynchos) in the Russian Far East

The Auk ◽  
2004 ◽  
Vol 121 (3) ◽  
pp. 930-949 ◽  
Author(s):  
Irina V. Kulikova ◽  
Yury N. Zhuravlev ◽  
Kevin G. McCracken
Keyword(s):  
East Asia ◽  
Control Region ◽  
Russian Far East ◽  
Far East ◽  
Mtdna Haplotypes ◽  
Group A ◽  
American Black ◽  
Group B ◽  
The Russian Far East

AbstractThe Eastern Spot-billed Duck (Anas zonorhyncha) historically was rare in the southern Russian Far East. However, during the last 60–70 years, its breeding range in East Asia has expanded northwest; Eastern Spot-billed Ducks are breeding increasingly within the range of Mallards (A. platyrhynchos). We collected 120 Eastern Spot-billed Ducks and Mallards from Primorye, Russia, and sequenced 666–667 base pairs (bp) of the maternally inherited mitochondrial DNA (mtDNA) control region and 255 bp of the ornithine decarboxylase intron six (ODC6). Control region and ODC-6 allele sequences revealed two divergent groups of haplotypes and alleles that differ by 1.5% and 2.0%, respectively, and correspond to Avise et al.'s (1990) group A and B mtDNA haplotypes. Group A mtDNA haplotypes occurred in 22 Eastern Spot-billed Ducks and 78 Asian Mallards, and group B haplotypes occurred in 14 Eastern Spot-billed Ducks and 4 Asian Mallards. Moreover, the group B haplotypes that we observed predominantly in Eastern Spot-billed Ducks (i.e. group SB) were monophyletic and diverged by 2–16 substitutions from group B haplotypes previously sequenced from 241 Mottled (A. fulvigula), American Black (A. rubripes), and Mexican ducks (A. diazi), and from North American Mallards. In contrast, type 1 and 2 ODC-6 allele frequencies for Eastern Spot-billed Ducks and Mallards did not differ, but heterozygosity for the former was greater than expected under Hardy-Weinberg equilibrium. Our analysis is the first to document the existence of two divergent haplotype and allele lineages (group A and B, type 1 and 2) in Asian mallard species and suggests that Eastern Spot-billed Ducks are more closely related to North America's Mottled, American Black, and Mexican ducks than they are to Mallards, which occur sympatrically in East Asia. Our data are consistent with the hypothesis that Eastern Spot-billed Ducks and Mallards have hybridized extensively in the Russian Far East. If so, apparent differences in group A and B mtDNA haplotype ratios, effective populations sizes, and migration rates indicate that many more male Eastern Spot-billed Ducks mated with female Mallards and more Eastern Spot-billed Ducks received ODC-6 alleles from Mallards than vice versa. We hypothesize that those differences reflect strong female natal-site fidelity and high levels of male dispersal, and that Mallards significantly outnumber Eastern Spotbilled Ducks in Primorye. Excess heterozygosity in Eastern Spot-billed Ducks (and in Mallards to a lesser extent) is probably maintained by ongoing emigration of Eastern Spot-billed Ducks and Mallards from areas of allopatry outside the Primorye region, where Eastern Spot-billed Ducks and Mallards are predicted to possesses genotypic frequencies historically diagnostic of each species.

Subgroups with characteristically different electroencephalographic profiles identified by cluster analysis within schizophrenic patients

2011 ◽  
Vol 26 (S2) ◽  
pp. 1468-1468
Author(s):  
M.N. Papaliaga ◽  
A.A. Hatziefthimiou ◽  
O. Mouzas ◽  
M. Karatziou ◽  
N. Angelopoulos
Keyword(s):  
Cluster Analysis ◽  
Frequency Band ◽  
Clinical State ◽  
Relative Power ◽  
Frequency Bands ◽  
Syndrome Scale ◽  
Schizophrenic Patients ◽  
Group A ◽  
Low Levels ◽  
Group B

AimTo examine clinical, electrophysiological differences among subgroups of schizophrenic patients with different QEEG profiles identified by cluster analysis.MethodFifty-two schizophrenic patients were studied (age:34.64 ± 10.41, 18–58 years). Digital, resting electroencephalogram was recorded and submitted to quantitative-topographic spectrum analysis (QEEG), and patients’ clinical state was assessed by the Greek version of Positive and Negative Syndrome Scale (PANSS). QEEG data were submitted to cluster analysis, and QEEG, clinical differences were compared using Kruskal-Wallis non-parametric test.ResultsThree groups of patients with different electrophysiological profiles (p < 0.05) were detected by cluster analysis of QEEG data: Group A, characterized by increased levels of relative power in α frequency band, low levels in β, medium levels of relative power in δ, θ frequency bands; Group B, characterized by increased levels of relative power in δ, θ frequency bands and medium in α, β; Group C, characterized by increased levels of relative power in β frequency band, very low in α, medium in δ, θ bands. According to PANSS, group A patients had lower (p < 0.05) levels of agitation, hostility/aggression, difficulty in abstract thinking, stereotypic thought and attention deficit than patients of the other groups.ConclusionsCluster analysis can be used to identify characteristically different QEEG profiles of schizophrenic patients. The cluster with increased relative power in the α frequency band, low levels in β, and medium in δ, θ bands was “healthier” in specific PANSS parameters than the clusters with low α and increased relative power in δ, θ and β frequency bands.

scholarly journals Yin-Cold or Yang-Heat Syndrome Type of Traditional Chinese Medicine Was Associated with the Epidermal Growth Factor Receptor Gene Status in Non-Small Cell Lung Cancer Patients: Confirmation of a TCM Concept

2017 ◽  
Vol 2017 ◽  
pp. 1-7 ◽  
Author(s):  
Yan-juan Zhu ◽  
Hai-bo Zhang ◽  
Li-rong Liu ◽  
Yi-hong Liu ◽  
Fu-li Zhang ◽  
...  
Keyword(s):  
Cluster Analysis ◽  
Logistic Regression ◽  
Chinese Medicine ◽  
Traditional Chinese Medicine ◽  
Syndrome Type ◽  
Multivariate Logistic Regression ◽  
Group A ◽  
Gene Status ◽  
Group B ◽  
Nsclc Patients

Traditional Chinese Medicine (TCM) therapies should be tailored according to the different syndrome types. In order to identify the relationship between the TCM Yin-cold (YC) or Yang-heat (YH) syndrome types and the EGFR gene status, we prospectively studied 310 NSCLC patients. TCM YH or YC was diagnosed by three TCM experts. TCM symptoms and signs were entered into a binary cluster analysis. The relationships between the EGFR gene status, YH or YC syndrome types, and classification by cluster analysis were analyzed using the chi-square test and multivariate logistic regression. In the 299 patients who had their EGFR gene tested, 45.24% YC (76/168) and 25.95% YH (34/131) patients had EGFR mutations (p=0.001). Among the 292 patients entered into the cluster analysis, 132 were classified into group A, with signs and symptoms similar to YC, whereas 160 group B patients were similar to YH. In the 281 patients with EGFR tested, 45.67% group A (58/127) and 28.57% group B patients (44/154) had EGFR mutations (p=0.003). The EGFR status was independently correlated with TCM syndrome type and classification by cluster analysis on multivariate logistic regression. NSCLC patients with YC were more likely to have EGFR gene mutations.

An ultrastructural study of sertoli cells in two geographically isolated populations of Aphanius dispar

1992 ◽  
Vol 50 (1) ◽  
pp. 548-549
Author(s):  
Taber A. Ba-Omar ◽  
Philip F. Prentis
Keyword(s):  
Ultrastructural Level ◽  
Uranyl Acetate ◽  
Freshwater Teleost ◽  
Isolated Populations ◽  
En Bloc ◽  
The North ◽  
Group A ◽  
Ultrathin Sections ◽  
Group B ◽  
Geographically Isolated

We have recently carried out a study of spermiogenic differentiation in two geographically isolated populations of Aphanius dispar (freshwater teleost), with a view to ascertaining variation at the ultrastructural level. The sampling areas were the Jebel Al Akhdar in the north (Group A) and the Dhofar region (Group B) in the south. Specimens from each group were collected, the testes removed, fixed in Karnovsky solution, post fixed in OsO, en bloc stained with uranyl acetate and then routinely processed to Agar 100 resin, semi and ultrathin sections were prepared for study.

Comparison of one-year prognosis of patients classified as chronic critical lower limb ischaemia according to TASC II or European consensus definition in the COPART cohort

VASA ◽  
2015 ◽  
Vol 44 (3) ◽  
pp. 0220-0228 ◽  
Author(s):  
Marion Vircoulon ◽  
Carine Boulon ◽  
Ileana Desormais ◽  
Philippe Lacroix ◽  
Victor Aboyans ◽  
...  
Keyword(s):  
Medical Treatment ◽  
Critical Limb Ischaemia ◽  
Limb Ischaemia ◽  
Medical Group ◽  
Consensus Definition ◽  
Transcutaneous Oxygen ◽  
European Consensus ◽  
Group A ◽  
One Year ◽  
Group B

Background: We compared one-year amputation and survival rates in patients fulfilling 1991 European consensus critical limb ischaemia (CLI) definition to those clas, sified as CLI by TASC II but not European consensus (EC) definition. Patients and methods: Patients were selected from the COPART cohort of hospitalized patients with peripheral occlusive arterial disease suffering from lower extremity rest pain or ulcer and who completed one-year follow-up. Ankle and toe systolic pressures and transcutaneous oxygen pressure were measured. The patients were classified into two groups: those who could benefit from revascularization and those who could not (medical group). Within these groups, patients were separated into those who had CLI according to the European consensus definition (EC + TASC II: group A if revascularization, group C if medical treatment) and those who had no CLI by the European definition but who had CLI according to the TASC II definition (TASC: group B if revascularization and D if medical treatment). Results: 471 patients were included in the study (236 in the surgical group, 235 in the medical group). There was no difference according to the CLI definition for survival or cardiovascular event-free survival. However, major amputations were more frequent in group A than in group B (25 vs 12 %, p = 0.046) and in group C than in group D (38 vs 20 %, p = 0.004). Conclusions: Major amputation is twice as frequent in patients with CLI according to the historical European consensus definition than in those classified to the TASC II definition but not the EC. Caution is required when comparing results of recent series to historical controls. The TASC II definition of CLI is too wide to compare patients from clinical trials so we suggest separating these patients into two different stages: permanent (TASC II but not EC definition) and critical ischaemia (TASC II and EC definition).

Absorbable suture material in carotid surgery

VASA ◽  
2015 ◽  
Vol 44 (6) ◽  
pp. 451-457 ◽  
Author(s):  
Vincenzo Gasbarro ◽  
Luca Traina ◽  
Francesco Mascoli ◽  
Vincenzo Coscia ◽  
Gianluca Buffone ◽  
...  
Keyword(s):  
Suture Material ◽  
Absorbable Suture ◽  
Paediatric Surgery ◽  
Carotid Surgery ◽  
Suture Materials ◽  
Absorbable Suture Material ◽  
Absorbable Sutures ◽  
Group A ◽  
Group B

Abstract. Background: Absorbable sutures are not generally accepted by most vascular surgeons for the fear of breakage of the suture line and the risk of aneurysmal formation, except in cases of paediatric surgery or in case of infections. Aim of this study is to provide evidence of safety and efficacy of the use of absorbable suture materials in carotid surgery. Patients and methods: In an 11 year period, 1126 patients (659 male [58.5 %], 467 female [41.5 %], median age 72) underwent carotid endarterectomy for carotid stenosis by either conventional with primary closure (cCEA) or eversion (eCEA) techniques. Patients were randomised into two groups according to the type of suture material used. In Group A, absorbable suture material (polyglycolic acid) was used and in Group B non-absorbable suture material (polypropylene) was used. Primary end-point was to compare severe restenosis and aneurysmal formation rates between the two groups of patients. For statistical analysis only cases with a minimum period of follow-up of 12 months were considered. Results: A total of 868 surgical procedures were considered for data analysis. Median follow-up was 6 years (range 1-10 years). The rate of postoperative complications was better for group A for both cCEA and eCEA procedures: 3.5 % and 2.0 % for group A, respectively, and 11.8 % and 12.9 % for group B, respectively. Conclusions: In carotid surgery, the use of absorbable suture material seems to be safe and effective and with a general lower complications rate compared to the use of non-absorbable materials.

Randomized trial of medical compression stockings versus two-layer short-stretch bandaging in the management of venous leg ulcers

Phlebologie ◽  
2009 ◽  
Vol 38 (04) ◽  
pp. 157-163 ◽  
Author(s):  
A. Franek ◽  
L. Brzezinska-Wcislo ◽  
E. Blaszczak ◽  
A. Polak ◽  
J. Taradaj
Keyword(s):  
Drug Therapy ◽  
Randomized Clinical Trials ◽  
Therapy Group ◽  
Long Term Results ◽  
Leg Ulcers ◽  
Compression Stockings ◽  
Venous Leg Ulcers ◽  
Group A ◽  
Group B ◽  
Medical Compression Stockings

SummaryA prospective randomized clinical trial was undertaken to compare a medical compression stockings with two-layer short-stretch bandaging in the management of venous leg ulcers. Study endpoints were number of completely healed wounds and the clinical parameters predicting the outcome. Patients, methods: Eighty patients with venous leg ulcers were included in this study, and ultimately allocated into two comparative groups. Group A consisted of 40 patients (25 women, 15 men). They were treated with the compression stockings (25–32 mmHg) and drug therapy. Group B consisted of 40 patients (22 women, 18 men). They were treated with the short-stretch bandages (30–40 mmHg) and drug therapy, administered identically as in group A. Results: Within two months the 15/40 (37.50%) patients in group A and 5/40 (12.50%) in group B were healed completely (p = 0.01). For patients with isolated superficial reflux, the healing rates at two months were 45.45% (10/22 healed) in group A and 18.18% (4/22 healed) in group B (p = 0.01). For patients with superficial plus deep reflux, the healing rates were 27.77% (5/18 healed) in group A and 5.55% (1/18 healed) in group B (p = 0.002). Comparison of relative change of the total surface area (61.55% in group A vs. 23.66% in group B), length (41.67% in group A vs. 27.99% in group B), width (46.16% in group A vs. 29.33% in group B), and volume (82.03% in group A vs. 40.01% in group B) demonstrated difference (p = 0.002 in all comparisons) in favour of group A. Conclusion: The medical compression stockings are extremely useful therapy in enhancement of venous leg ulcer healing (both for patients with superficial and for patients who had superficial plus deep reflux). Bandages are less effective (especially for patients with superficial plus deep reflux, where the efficiency compared to the stockings of applied compression appeared dramatically low). These findings require confirmation in other randomized clinical trials with long term results.

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