Estimating the intra- and inter-individual imprecision of manual pipetting

Author(s):  
Giuseppe Lippi ◽  
Gabriel Lima-Oliveira ◽  
Giorgio Brocco ◽  
Antonella Bassi ◽  
Gian Luca Salvagno

AbstractBackground:Despite the importance of manual pipetting of fluids such as water, solutions, buffers, reagents, or biological samples in daily laboratory practice, the intra- and inter-individual imprecision of this activity has not been recently described in scientific publications.Methods:Twenty laboratory operators were randomly enrolled for this study. Imprecision of manual pipetting was estimated by asking each laboratory professional to dispense 1 mL, 100 μL or 10 μL of distilled water for 10 consecutive times with three certified pipettes into a 50-mL plastic container placed into a gravimetric balance. The weight of the water dispensed was systematically recorded for each of the 10 repeated attempts, and the inter- and intra-operator imprecision was finally calculated and expressed as coefficient of variation (CV%).Results:The mean intra-individual imprecision was 5.7% (range, 0%–11.8%) for pipetting 10 μL, 0.8% (range, 0.4%–1.9%) for pipetting 100 μL, and 0.2% (range, 0.1%–0.5%) for pipetting 1 mL. Overall, the mean inter-individual imprecision was 8.1% for pipetting 10 μL, 1.1% for pipetting 100 μL and 0.4% for pipetting 1 mL. A significantly inverse correlation was found between intra-individual pipetting imprecision and the amount of water dispensed (r = –0.80; p<0.001). No significant correlation was observed between individual pipetting performance and sex, age, qualification, and years of experience in the laboratory.Conclusions:The results of this study show that manual pipetting is plagued by a considerable intra- and inter-individual imprecision, which is inversely correlated with the amount of fluid dispensed.

1965 ◽  
Vol 49 (1) ◽  
pp. 1-16 ◽  
Author(s):  
M. Apostolakis

ABSTRACT A method for the extraction of prolactin from human pituitary glands is described. It is based on acetone drying, distilled water extraction, acetone and isoelectric precipitation. Two main products are obtained: Fraction R8 with a mean prolactin activity of 12.2 IU/mg and fraction U8 with a mean prolactin activity of 8.6 IU/mg. The former fraction does not contain any significant gonadotrophin activity and the latter contains on an average 50 HMG U/mg. In both cases contamination with ACTH and MSH is minimal. The growth hormone activity of both these fractions is low. It is postulated that in man too, prolactin and growth hormone are two distinct hormones. A total of 1250 human pituitary glands have been processed by this method. The mean prolactin content per pituitary gland has been found to be 73 IU.


2018 ◽  
Vol 5 (01) ◽  
Author(s):  
TAPAN K. KHURA ◽  
H. L. KUSHWAHA ◽  
SATISH D LANDE ◽  
PKSAHOO . ◽  
INDRA L . KUSHWAHA

Floriculture is an age-old farming activity in India having immense potential for generating selfemployment and income to farmers. However, the cost of cultivation of flower is high as compared to cereal crop. Level of mechanization for different field operations is one but foremost reason for the higher cost of cultivation. As most of the Indian farmers are marginal and small, a need for manually operated gladiolus planter was felt. The geometric properties of gladiolus corm were determined for designing the seed metering system and seed hopper of the planter. The planter was evaluated in the field when pulled by two persons as a power source and guided by a person. The coefficient of variation and highest deviation from the mean spacing was observed as 12.93% and 2.65cm respectively. The maximum coefficient of uniformity of 90.59% was observed for a nominal corm spacing of 15cm at 0.56 kmh-1 forward speed. An average MISS percentage was observed as 2.65 and 2.25 for nominal corm spacing of 15 and 20 cm. The multiple index was zero for two levels corm spacing and forward speed of operation. The QFI was found in the range of 97.2 and 97.9 percent. The average field capacity of the planter was observed as 0.02 hah-1.The average draft requirement of the planter was found as 821 ± 50.3 N.


2019 ◽  
Vol 23 (10) ◽  
pp. 4323-4331 ◽  
Author(s):  
Wouter J. M. Knoben ◽  
Jim E. Freer ◽  
Ross A. Woods

Abstract. A traditional metric used in hydrology to summarize model performance is the Nash–Sutcliffe efficiency (NSE). Increasingly an alternative metric, the Kling–Gupta efficiency (KGE), is used instead. When NSE is used, NSE = 0 corresponds to using the mean flow as a benchmark predictor. The same reasoning is applied in various studies that use KGE as a metric: negative KGE values are viewed as bad model performance, and only positive values are seen as good model performance. Here we show that using the mean flow as a predictor does not result in KGE = 0, but instead KGE =1-√2≈-0.41. Thus, KGE values greater than −0.41 indicate that a model improves upon the mean flow benchmark – even if the model's KGE value is negative. NSE and KGE values cannot be directly compared, because their relationship is non-unique and depends in part on the coefficient of variation of the observed time series. Therefore, modellers who use the KGE metric should not let their understanding of NSE values guide them in interpreting KGE values and instead develop new understanding based on the constitutive parts of the KGE metric and the explicit use of benchmark values to compare KGE scores against. More generally, a strong case can be made for moving away from ad hoc use of aggregated efficiency metrics and towards a framework based on purpose-dependent evaluation metrics and benchmarks that allows for more robust model adequacy assessment.


2019 ◽  
Vol 73 (12) ◽  
pp. 1436-1450 ◽  
Author(s):  
Fabiola León-Bejarano ◽  
Martin O. Méndez ◽  
Miguel G. Ramírez-Elías ◽  
Alfonso Alba

A novel method based on the Vancouver Raman algorithm (VRA) and empirical mode decomposition (EMD) for denoising Raman spectra of biological samples is presented. The VRA is one of the most used methods for denoising Raman spectroscopy and is composed of two main steps: signal filtering and polynomial fitting. However, the signal filtering step consists in a simple mean filter that could eliminate spectrum peaks with small intensities or merge relatively close spectrum peaks into one single peak. Thus, the result is often sensitive to the order of the mean filter, so the user must choose it carefully to obtain the expected result; this introduces subjectivity in the process. To overcome these disadvantages, we propose a new algorithm, namely the modified-VRA (mVRA) with the following improvements: (1) to replace the mean filter step by EMD as an adaptive parameter-free signal processing method; and (2) to automate the selection of polynomial degree. The denoising capabilities of VRA, EMD, and mVRA were compared in Raman spectra of artificial data based on Teflon material, synthetic material obtained from vitamin E and paracetamol, and biological material of human nails and mouse brain. The correlation coefficient (ρ) was used to compare the performance of the methods. For the artificial Raman spectra, the denoised signal obtained by mVRA ([Formula: see text]) outperforms VRA ([Formula: see text]) for moderate to high noise levels whereas mVRA outperformed EMD ([Formula: see text]) for high noise levels. On the other hand, when it comes to modeling the underlying fluorescence signal of the samples (i.e., the baseline trend), the proposed method mVRA showed consistent results ([Formula: see text]. For Raman spectra of synthetic material, good performance of the three methods ([Formula: see text] for VRA, [Formula: see text] for EMD, and [Formula: see text] for mVRA) was obtained. Finally, in the biological material, mVRA and VRA showed similar results ([Formula: see text] for VRA, [Formula: see text] for EMD, and [Formula: see text] for mVRA); however, mVRA retains valuable information corresponding to relevant Raman peaks with small amplitude. Thus, the application of EMD as a filter in the VRA method provides a good alternative for denoising biological Raman spectra, since the information of the Raman peaks is conserved and parameter tuning is not required. Simultaneously, EMD allows the baseline correction to be automated.


Author(s):  
Giuseppina Autuori ◽  
Federico Cluni ◽  
Vittorio Gusella ◽  
Patrizia Pucci

In this paper, we yield with a nonlocal elastic rod problem, widely studied in the last decades. The main purpose of the paper is to investigate the effects of the statistic variability of the fractional operator order s on the displacements u of the rod. The rod is supposed to be subjected to external distributed forces, and the displacement field u is obtained by means of numerical procedure. The attention is particularly focused on the parameter s, which influences the response in a nonlinear fashion. The effects of the uncertainty of s on the response at different locations of the rod are investigated by the Monte Carlo simulations. The results obtained highlight the importance of s in the probabilistic feature of the response. In particular, it is found that for a small coefficient of variation of s, the probability density function of the response has a unique well-identifiable mode. On the other hand, for a high coefficient of variation of s, the probability density function of the response decreases monotonically. Finally, the coefficient of variation and, to a small extent, the mean of the response tend to increase as the coefficient of variation of s increases.


1986 ◽  
Vol 22 (4) ◽  
pp. 353-361
Author(s):  
Tilak Abeysinghe

SUMMARYThe calibrating efficiency of the pre-experimental yield of coconuts was examined using ten years data from a calibration experiment. On the basis of a fully randomized design it was found that the two-year pooled pre-experimental yield on four-tree plots produces consistent calibration and reduces the experimental error mean square by about 73%. This brings down the mean coefficient of variation to 9.7% from its pre-calibration levels of 36 on one-tree plots and 18 on four-tree plots.


Author(s):  
J.D. Mande ◽  
P.M.F. Mbithi ◽  
S.W. Mbugua ◽  
I.B.J. Buoro ◽  
P.K. Gathumbi

Ventrodorsal pelvic radiographs were made of 32 adult dogs under general anaesthesia. The hip joints were evaluated according to the severity of osteoarthritic changes graded as 0, 1, 2 or 3. The dogs were euthanased, the hip joints opened and the ligamentum capitis femoris dissected out in toto. The volume of each ligament was determined using a water displacement technique and the mean volume compared to the four radiographic grades of osteoarthritis. There was an inverse correlation (r = -0.75) between the mean volume of the ligamentum capitis femoris and the increasing severity of osteoarthritis as assessed by radiography. The results confirmed the crucial role of radiography in the clinical evaluation of hip dysplasia and osteoarthritis in the adult dog. Assessment of the volume of the ligamentum capitis femoris revealed that it is an important tool for research in canine hip dysplasia and osteoarthritis.


2009 ◽  
Vol 24 (2) ◽  
pp. 133-139 ◽  
Author(s):  
Jan Krul ◽  
Armand R. J. Girbes

AbstractObjective:The objective of this study was to report on a nine years of experience of providing medical support during house parties (raves) in the Netherlands, where they can be organized legally.Design:This was a prospective, observational study of self-referred patients from 1997 to 2005. During raves, first aid stations are staffed with specifically trained medical and paramedical personnel. Self-referred patients were diagnosed, treated, and recorded using standardized methods.Results:During a nine-year period with 219 raves occurred, involving approximately three million participants, 23,581 patients visited the first aid stations. The medical usage rate (MUR) varied from 59–170 patients per 10,000 rave participants. The mean age increased from 1997 to 2005 from 18.7 ±2.7 to 23.3 ±5.7 years. The mean stay at the first aid station was 18 ±46 minutes. Most health problems were mild. Fifteen cases of severe incidents were observed with one death.Conclusions:Unique data from the Netherlands demonstrate a low number of serious, health-related, short-term problems during raves.


2006 ◽  
Vol 291 (5) ◽  
pp. R1265-R1274 ◽  
Author(s):  
John-Paul Baird ◽  
Catalina Rios ◽  
Nora Elizabeth Gray ◽  
Caroline Elizabeth Walsh ◽  
Shannon Glenora Fischer ◽  
...  

The effects of intracerebroventricular application of melanin-concentrating hormone (MCH) on licking for sucrose, quinine hydrochloride (QHCl), and water solutions were evaluated in two experiments. In experiment 1, rats received 90-min access to sucrose and water solutions after MCH or vehicle microinjection to the third ventricle (3V). MCH increased intake largely through increases in the rate of licking early in the meal and in the mean duration of lick bursts, suggesting an effect on gustatory evaluation. Therefore, in experiment 2, brief access tests were used with a series of sucrose and QHCl concentrations to behaviorally isolate the effects of intracerebroventricular MCH on gustatory evaluation. MCH uniformly increased licking for all sucrose solutions, water, and weak concentrations of QHCl; however, it had no effect on licking for the strongest concentrations of QHCl, which were generally avoided under control conditions. Thus MCH did not produce nonspecific increases in oromotor activity, nor did it change the perceived intensity of the tastants. We conclude that MCH enhanced the gain of responses to normally accepted stimuli at a phase of processing after initial gustatory detection and after the decision to accept or reject the taste stimulus. A comparison of 3V NPY and MCH effects on licking microstructure indicated that these two peptides increased intake via dichotomous behavioral processes; although NPY suppressed measures associated with inhibitory feedback from the gut, MCH appeared instead to enhance measures associated with hedonic taste evaluation.


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