Growth enhancement of medicinal plant Withania somnifera using phosphate solubilizing endophytic bacteria Pseudomonas sp. as bioinoculant

2016 ◽  
Vol 2 (1-2) ◽  
Author(s):  
Naveen Kumar Arora ◽  
Rachna B. Singh
Keyword(s):  
Medicinal Plant ◽  
Endophytic Bacteria ◽  
Withania Somnifera ◽  
16S Rrna Gene Sequencing ◽  
Nutrient Level ◽  
Rrna Gene ◽  
Growth Enhancement ◽  
Pseudomonas Sp ◽  
Beneficial Effects ◽  
Medicinal Value

Withania somnifera, commonly known as ashwagandha, is a wildly growing highly valuable medicinal plant, found throughout India. Ashwagandha has high medicinal value due to its antioxidant, antitumor, anti-inflammatory, immuno-modulatory, anti-ageing and rejuvenating properties. Since use of synthetic agrochemicals in the cultivation of medicinal plants is highly restricted due to their harmful effects on human health and environment, present study was aimed to explore the role of endophytic bacteria in enhancing the nutrient level in soil and growth of ashwagandha. In this study, growth promoting potential of endophytic bacterial strain PSE-1 was explored which was isolated from the roots of W. somnifera and identified as Pseudomonas sp. on the basis of 16s rRNA gene sequencing. Results obtained from the study suggest that endophytic bacteria Pseudomonas sp. plays important role in improving the nutrient level in soil and displayed beneficial effects on plant growth.

Bacterial endosymbiont inhabiting Leucaena leucocephala leaves and their antioxidant and antidiabetic potential

2020 ◽  
Vol 0 (0) ◽  
Author(s):  
Sridevi Chigurupati ◽  
Shantini Vijayabalan ◽  
Kesavanarayanan Krishnan Selvarajan ◽  
Ahmad Alhowail ◽  
Fatema Kauser
Keyword(s):  
Free Radical ◽  
Crude Extract ◽  
Leucaena Leucocephala ◽  
Endophytic Bacteria ◽  
Radical Scavenging ◽  
16S Rrna Gene Sequencing ◽  
Free Radical Scavenging ◽  
Rrna Gene ◽  
Standard Drug

AbstractObjectivesResearch on endosymbionts is emerging globally and is considered as a potential source of bioactive phytochemicals. The present study examines the antioxidant and antidiabetic of the endophytic crude extract isolated from Leucaena leucocephala leaves.MethodsEndophytic bacteria were isolated from the leaves of L. leucocephala and 16S rRNA gene sequencing was used to establish their identity. The in vitro antioxidant effect of endophytic crude extract (LL) was evaluated using 2-diphenyl-1-picrylhydrazyl (DPPH) and 2, 2′-azino-bis-3-ethylbenzthiazoline-6-sulphonic acid (ABTS) free radical scavenging methods. The in vitro antidiabetic properties of LL were evaluated using α-amylase and α-glucosidase enzyme inhibition assay.ResultsThe isolated endophytic bacteria were identified as Cronobacter sakazakii. LL displayed potent free radical scavenging effect against ABTS and DPPH radicals with an inhibitory concentration 50% (IC50) value of 17.49 ± 0.06 and 11.3 ± 0.1 μg/mL respectively. LL exhibited α-amylase and α-glucosidase inhibition with an IC50 value of 23.3 ± 0.08 and 23.4 ± 0.1 μg/mL respectively compared to the standard drug (acarbose). Both glucose loaded normoglycemic rats and STZ induced diabetic rats treated with LL (200 mg/kg) exhibited a considerable reduction in blood glucose levels p<0.01 after 8 h of treatment when compared to normal and diabetic control rats respectively.ConclusionsThus, the study shows that LL has a wellspring of natural source of antioxidants, and antidiabetic agents and phytoconstituents present in endophytes could be the rich source for bioactive compounds.

Assessing the Plant Growth-promoting Traits and Host Specificity of Endophytic Bacteria of Pulse Crops

2021 ◽  
Author(s):  
R. Thamizh Vendan ◽  
D. Balachandar
Keyword(s):  
Plant Growth ◽  
Endophytic Bacteria ◽  
Gene Sequencing ◽  
16S Rrna Gene Sequencing ◽  
Growth And Yield ◽  
Rrna Gene ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Rrna Gene Sequencing ◽  
Plant Growth Promoting Traits

Background: Symbiotic associations between legumes and Rhizobia are ancient and fundamental. However, the plant growth-promoting endophytes other than Rhizobia are not yet fully explored for pulses productivity. The present study was aimed to isolate efficient endophytic bacteria from pulses, assess their diversity, screen their plant growth-promoting activities and to test their potential as bio inoculants for pulses.Methods: We have isolated several endophytic bacteria from pulse crops more specifically from blackgram (Vigna mungo) and greengram (Vigna radiata). After careful screening, 15 promising endophytic isolates were selected for this study. The identification of endophytic bacterial isolates was performed by 16S rRNA gene sequencing. The isolates were tested for their potential for the plant growth-promoting traits such as nitrogen fixation, phosphate solubilization, indole-3-acetic acid production, siderophore secretion and antifungal activity. Pot culture experiments were conducted with the screened potential endophytic cultures.Result: The 16S rRNA gene sequencing revealed that species of Enterobacter, Bacillus, Pantoea, Pseudomonas, Acromobacter, Ocrobacterium were found as endophytes in blackgram and greengram. The in vitro screening identified Bacillus pumilus (BG-E6), Pseudomonas fluorescens (BG-E5) and Bacillus licheniformis (BG-E3) from blackgram and Pseudomonas chlororaphis (GG-E2) and Bacillus thuringiensis (GG-E7) from greengram as potential plant growth-promoting endophytes. These strains showed antagonism against plant pathogenic fungi. Upon inoculation of these endophytic PGPR strains, the blackgram and greengram growth and yield got increased. Among the strains, BG-E6 recorded 14.7% increased yield in blackgram and GG-E2 accounted for a 19.5% yield increase in greengram compared to respective uninoculated control. The experimental results showed that there was a host specificity found among the endophytic bacterial cultures with pulses. The cross inoculation of endophytic strains did not perform well to enhance the growth and yield of their alternate hosts. 

scholarly journals Changes in the Intestinal Microbiome during a Multispecies Probiotic Intervention in Compensated Cirrhosis

Nutrients ◽  
2020 ◽  
Vol 12 (6) ◽  
pp. 1874 ◽  
Author(s):  
Angela Horvath ◽  
Marija Durdevic ◽  
Bettina Leber ◽  
Katharina di Vora ◽  
Florian Rainer ◽  
...  
Keyword(s):  
Gut Microbiome ◽  
Controlled Trial ◽  
16S Rrna Gene Sequencing ◽  
Intestinal Microbiome ◽  
Rrna Gene ◽  
Microbiome Composition ◽  
Beneficial Effects ◽  
Compensated Cirrhosis ◽  
Gut Barrier Function ◽  
Probiotic Treatment

Probiotics have been used in trials to therapeutically modulate the gut microbiome and have shown beneficial effects in cirrhosis. However, their effect on the microbiome of cirrhosis patients is not fully understood yet. Here, we tested the effects of a multispecies probiotic on microbiome composition in compensated cirrhosis. The gut microbiome composition of 58 patients with compensated cirrhosis from a randomized controlled trial who received a daily dose of multispecies probiotics or placebo for six months was analysed by 16S rRNA gene sequencing. Microbiome composition of patients who received probiotics was enriched with probiotic strains and the abundance of Faecalibacterium prausnitzii, Syntrophococcus sucromutans, Bacteroides vulgatus, Alistipes shahii and a Prevotella species was increased in the probiotic group compared to the placebo group. Patients who had microbiome changes in response to probiotic treatment also showed a significant increase in neopterin and a significant decrease in faecal zonulin levels after intervention, which was not observed in placebo-treated patients or patients with unchanged microbiome compositions. In conclusion, multispecies probiotics may enrich the microbiome of compensated cirrhotic patients with probiotic bacteria during a six-month intervention and beneficially change the residential microbiome and gut barrier function.

scholarly journals ISOLASI MIKROBA ENDOFITIK DARI TANAMAN OBAT SAMBUNG NYAWA Gynura procumbens) DAN ANALISIS POTENSINYA SEBAGAI ANTIMIKROBA

2007 ◽  
Vol 13 (1) ◽  
pp. 85-90 ◽  
Author(s):  
Rumella Simarmata ◽  
Sylvia Lekatompessy ◽  
Harmastini Sukiman
Keyword(s):  
Antimicrobial Activity ◽  
Endophytic Fungi ◽  
Endophytic Bacteria ◽  
Antimicrobial Agents ◽  
Inhibition Zone ◽  
Pseudomonas Sp ◽  
E Coli ◽  
Beneficial Effects ◽  
Medical Plants ◽  
Promising Source

Sambung nyawa (Gynura procumbens) has many beneficial effects to human health, such as decreasing blood pressure, maintaining blood sugar level (hypoglycaemic), decreasing cholesterol, a remedy for kidney trouble, antibacterial and lessen the inflamation (antiinflamation). This research was undertaken to discover the potency of endophytic microbes from sambung nyawa as antimicrobial agents. The purpose of this research was to screen the endophytic bacteria and the endophytic fungi having antimicrobial activity, which were isolated from stems, leaves, roots and fruits of medical plants, sambung nyawa. The antimicrobial activity was determined by measuring the growth inhibition of pathogenic microbes i.e Candida albicans, Escherichia coli, Pseudomonas sp. and Bacillus subtilis. A total of 38 isolates of bacteria and 15 isolates of fungi were obtained from sambung nyawa. Analysis demonstrated that, 45 percent isolates of bacteria and 20 percent isolates of fungi exhibited inhibitory activity. Antimicrobial activity was found in 21 percent of the isolates that inhibited the growth of C. albicans, E. coli, Pseudomonas sp., and B. subtilis, whereas 24 percent of isolates had activity only against B. subtilis. Isolate of endophytic bacteria USN 1.1 and USN 2.3 showed the most significant of inhibition zone. The Inhibition zone of the isolate USN 1.1 to C. albicans, E. coli, Pseudomonas sp, and B. subtilis were 2.318 cm2, 0.969 cm2, 0.796 cm2, and 0.381 cm2, respectively. The Inhibition zone of the isolate USN 2.3 to C. albicans, E. coli, Pseudomonas sp., and B. subtilis were 3.01 cm2, 0.519 cm2, 0.588 cm2 and 0.83 cm2, respectively. These results indicated that endophytic bacteria and endophytic fungi could be a promising source for antimicrobial agents.

scholarly journals Maternal Fish Consumption in Pregnancy Is Associated with a Bifidobacterium-Dominant Microbiome Profile in Infants

2019 ◽  
Vol 4 (1) ◽  
Author(s):  
Meg Simione ◽  
Stephanie G Harshman ◽  
Ines Castro ◽  
Rachel Linnemann ◽  
Brianna Roche ◽  
...  
Keyword(s):  
Fish Consumption ◽  
16S Rrna Gene Sequencing ◽  
Fecal Microbiota ◽  
Rrna Gene ◽  
Multinomial Regression ◽  
National Guidelines ◽  
Third Trimester ◽  
Beneficial Effects ◽  
Microbiome Profile ◽  
Rrna Gene Sequencing

ABSTRACT National guidelines suggest that pregnant women consume 2–3 servings of fish weekly and often focus exclusively on limiting mercury exposure. We examined if meeting this recommendation in the third trimester of pregnancy was associated with differences in infant fecal microbiota composition and diversity. We used multinomial regression to analyze data from 114 infant–mother dyads. Applying 16S rRNA gene sequencing, we identified 3 infant fecal microbiota profiles: Bifidobacterium dominant, Enterobacter dominant, and Escherichia dominant. We found that 20% of mothers met the recommended fish consumption, and those infants whose mothers met the recommendation were more likely to have a Bifidobacterium-dominant profile than an Escherichia-dominant profile (RR ratio: 4.61; 95% CI: 1.40, 15.15; P = 0.01). In multivariable models, the significant association persisted (P &lt; 0.05). Our findings support the need to expand recommendations focusing on the beneficial effects of fish consumption on the infant fecal microbiota profile.

scholarly journals Lichenological Practices for Monitoring Atmospheric Pollution and Climate Change in India

2019 ◽  
Vol 5 (03) ◽  
pp. 170-185
Author(s):  
Rajesh Bajpai ◽  
C. P. Singh ◽  
D. K. Upreti
Keyword(s):  
Heavy Metals ◽  
Heavy Metal ◽  
16S Rrna ◽  
16S Rrna Gene ◽  
Gene Sequencing ◽  
16S Rrna Gene Sequencing ◽  
Soil Conditions ◽  
Rrna Gene ◽  
Pseudomonas Sp ◽  
Rrna Gene Sequencing

Soil microflora is continuously changing with altered soil conditions. These soil alterations are a consequence of heavy metals entering and affecting every sphere of life. Heavy metals are not only hazardous for crops but also affect the soil microbial community. Soil bacteria with the potential of plant growth promotion and multiple metal resistances can be an instrument for crop improvement and heavy metal detoxification. In this study, predominant bacterial community associated with the heavy metal contaminated soil was studied using 16S rRNA gene sequencing in association with culture-based techniques. Elemental metal analysis of collected soil samples showed an elevated level of metal content in the soil. 16S rRNA gene analysis and phylogenetic analysis of 126 bacterial clones revealed the probable predominance of Pseudomonas (40.48%) followed by Flavisolibacter (13.49%). Based on morphological and biochemical characterization, nine Pseudomonas strains were selected from the soil and were further confirmed by 16S rRNA gene sequencing with 92%-100% similarity with Pseudomonas species. The minimum inhibitory concentration (MIC) and maximum tolerance capacity (MTC) of three essential metals Cu, Zn, and Fe were determined individually and in combinations. It was found that Zn is the most toxic metal among the three metals and the metal showed a synergistic effect in inhibiting microbial growth when used in combinations. Presence of three metal resistant/tolerant genes czcA, pcoA and copB were also determined in the isolated Pseudomonas sp. by PCR. The soil in this region has high concentrations of heavy metals. The indigenous Pseudomonas sp. has multiple metal resistances and can be used for bioremediation of heavy metals and microbe assisted phytoremediation.

scholarly journals Biodiversity of dominant cultivable endophytic bacteria inhabiting tissues of six different cultivars of maize (Zea mays L. ssp. mays) cropped under field conditions

2015 ◽  
Vol 64 (2) ◽  
pp. 163-170 ◽  
Author(s):  
KATARZYNA PISARSKA ◽  
STANISŁAW JERZY PIETR
Keyword(s):  
Endophytic Bacteria ◽  
16S Rrna Gene Sequencing ◽  
Field Conditions ◽  
Temperate Climate ◽  
Rrna Gene ◽  
Maize Cultivars ◽  
Bacillus Simplex ◽  
Rrna Gene Sequencing ◽  
Arthrobacter Nicotinovorans

Endophytic bacteria (EnB) play a crucial role in plant development. This study was an attempt to isolate and identify dominant cultivable EnB inhabiting young seedlings germinated in vitro and leaves of six maize cultivars grown under field conditions at temperate climate zone with culture-dependent approach. We isolated bacteria from field cropped maize only. Strains were identified based on 16S rRNA gene sequencing. In particular, members of Actinobacteria, Bacteroidetes, Firmicutes and α- and γ-Proteobacteria were found. Species of two genus Pseudomonas and Bacillus were dominant among them. Higher diversity of EnB was found in plants collected from Kobierzyce, where we identified 35 species from 16 genera with 22 species uniquely found at this field. On the contrary, from maize leaves collected at Smolice we identified 24 species representing 10 genera with 10 species uniquely isolated from this field. However, none of species was common for all cultivars at both locations. Among isolated EnB six species only, Pseudomonas clemancea, Pseudomonasfluorescens, Bacillus megaterium, Bacillus simplex, Arthrobacter nicotinovorans and Arthrobacter nitroguajacolicus, were found in aboveground parts of the same cultivar grown on both tested fields. The fact that the same cultivars, sown from the same lots of seeds, under field conditions on two different locations were colonized with noticeably different associations of cultivable EnB suggest that cultivar genotype is an important factor selecting endophytic bacteria from local agro-environment. To our knowledge this is first report about the significant variation of diversity of cultivable endophytic bacteria inhabiting aboveground parts of the same maize cultivars grown at different locations.

scholarly journals Bacterial Diversity in Roots, Stems, and Leaves of Chinese Medicinal Plant Paris polyphylla var. yunnanensis

2020 ◽  
Vol 69 (1) ◽  
pp. 91-97
Author(s):  
TIAN-HAO LIU ◽  
YIN ZHOU ◽  
WEN-CONG TAO ◽  
YANG LIU ◽  
XIAO-MEI ZHANG ◽  
...  
Keyword(s):  
Chinese Herb ◽  
16S Rrna Gene Sequencing ◽  
Rrna Gene ◽  
Bacterial Endophytes ◽  
Functional Characteristics ◽  
Medicinal Value ◽  
Paris Polyphylla ◽  
Stems And Leaves ◽  
Rrna Gene Sequencing ◽  
Extracellular Structures

The root of Paris polyphylla var. yunnanensis, a famous and endangered traditional Chinese herb, has a significant medicinal value. The aim of this study was to analyze the composition and functional characteristics of bacterial endophytes in roots, stems, and leaves of P. polyphylla var. yunnanensis. The 16S rRNA gene sequencing and functional prediction of bacterial endophytes in roots, stems, and leaves of P. polyphylla var. yunnanensis were conducted. The Chao and Shannon indices of the bacteria in roots were significantly higher than those in stems and leaves. The dominant endophyte phyla were Cyanobacteria, Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. The main genera detected in roots were unclassified Cyanobacteria, Rhizobium, Flavobacterium, and Sphingobium; the main genera in stems were norank_c__Cyanobacteria, Bacillus, and Pseudomonas; the main genera in leaves were norank_c__Cyanobacteria and Rhizobium. The microbiota in roots was particularly enriched in functional categories “extracellular structures” and “cytoskeleton” compared with stems and leaves (p < 0.05). Our study reveals the structural and functional characteristics of the endophytic bacteria in roots, stems, and leaves of P. polyphylla var. yunnanensis, which aids in the scientific understanding of this plant.

Pseudomonas: A Major Bacteria in Heavy Metal Contaminated Soil of South-West Punjab, India

2019 ◽  
Vol 5 (01) ◽  
pp. 26-32 ◽  
Author(s):  
Sanjeev Kumar ◽  
Arindam Adhikary ◽  
Rashmi Saini ◽  
Pankaj Bhardwaj
Keyword(s):  
Heavy Metals ◽  
Heavy Metal ◽  
16S Rrna ◽  
16S Rrna Gene ◽  
Contaminated Soil ◽  
Gene Sequencing ◽  
16S Rrna Gene Sequencing ◽  
Rrna Gene ◽  
Pseudomonas Sp ◽  
Rrna Gene Sequencing

Soil microflora is continuously changing with altered soil conditions. These soil alterations are a consequence of heavy metals entering and affecting every sphere of life. Heavy metals are not only hazardous for crops but also affect the soil microbial community. Soil bacteria with the potential of plant growth promotion and multiple metal resistances can be an instrument for crop improvement and heavy metal detoxification. In this study, predominant bacterial community associated with the heavy metal contaminated soil was studied using 16S rRNA gene sequencing in association with culture-based techniques. Elemental metal analysis of collected soil samples showed an elevated level of metal content in the soil. 16S rRNA gene analysis and phylogenetic analysis of 126 bacterial clones revealed the probable predominance of Pseudomonas (40.48%) followed by Flavisolibacter (13.49%). Based on morphological and biochemical characterization, nine Pseudomonas strains were selected from the soil and were further confirmed by 16S rRNA gene sequencing with 92%-100% similarity with Pseudomonas species. The minimum inhibitory concentration (MIC) and maximum tolerance capacity (MTC) of three essential metals Cu, Zn, and Fe were determined individually and in combinations. It was found that Zn is the most toxic metal among the three metals and the metal showed a synergistic effect in inhibiting microbial growth when used in combinations. Presence of three metal resistant/tolerant genes czcA, pcoA and copB were also determined in the isolated Pseudomonas sp. by PCR. The soil in this region has high concentrations of heavy metals. The indigenous Pseudomonas sp. has multiple metal resistances and can be used for bioremediation of heavy metals and microbe assisted phytoremediation.

scholarly journals Optimization of glutaminase-free L-asparaginase production using mangrove endophytic Lysinibacillus fusiformis B27

F1000Research ◽  
2020 ◽  
Vol 8 ◽  
pp. 1938
Author(s):  
Asep Awaludin Prihanto ◽  
Indah Yanti ◽  
Mohammad Achsanil Murtazam ◽  
Yoga Dwi Jatmiko
Keyword(s):  
Endophytic Bacteria ◽  
Enzyme Production ◽  
16S Rrna Gene Sequencing ◽  
Rrna Gene ◽  
Rhizophora Mucronata ◽  
Inoculum Concentration ◽  
Lysinibacillus Fusiformis ◽  
Four Levels ◽  
Rrna Gene Sequencing ◽  
Optimum Production

Background: The mangrove, Rhizophora mucronata, an essential source of endophytic bacteria, was investigated for its ability to produce glutaminase-free L-asparaginase. The study aimed to obtain glutaminase-free L-asparaginase-producing endophytic bacteria from the mangrove and to optimize enzyme production. Methods: The screening of L-asparaginase-producing bacteria used modified M9 medium. The potential producer was further analyzed with respect to its species using 16S rRNA gene sequencing. Taguchi experimental design was applied to optimize the enzyme production. Four factors (L-asparagine concentration, pH, temperature, and inoculum concentration) were selected at four levels. Results: The results indicated that the endophytic bacteria Lysinibacillus fusiformis B27 isolated from R. mucronata was a potential producer of glutaminase-free L-asparaginase. The experiment indicated that pH 6, temperature at 35°C, and inoculum concentration of 1.5% enabled the best production and were essential factors. L-asparagine (2%) was less critical for optimum production. Conclusions: L. fusiformis B27, isolated from Rhizophora mucronata, can be optimized for L-ASNase enzyme production using optimization factors (L-ASNase, pH, temperature, and inoculum), which can increase L-ASNase enzyme production by approximately three-fold.

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