scholarly journals Komposisi dan Sebaran Patotipe Xanthomonas oryzae pv. oryzae, Penyakit pada Padi di Nusa Tenggara Barat

2015 ◽  
Vol 34 (2) ◽  
pp. 113
Author(s):  
Sudir Sudir ◽  
Dini Yuliani ◽  
Lalu Wirajaswadi

<p>A study was carried out to identify the composition and distribution of Xanthomonas oryzae pv. oryzae (Xoo) pathotypes on rice crop in West Nusa Tenggara, during the 2012 planting season. Three activities were conducted, namely collection of rice leaf samples from the fields, isolation of Xoo from the leaf samples at the laboratory, and testing pathotypes of Xoo at the screen house. Rice leaves showing typical bacterial leaf blight (BLB) symptom were collected from various farmers’ fields. The samples were detached and put into paper envelopes, and were taken to the laboratory for isolation of Xoo, at the Laboratory of Pythopathology of Indonesian Center for Rice Research (ICRR), Sukamandi. Pathotype testing was done in the ICRR screen house by inoculating the leaves of five differential rice varieties using inocula of the Xoo isolates. Resistance of the rice differential varieties was determined based on the BLB disease severity. Inoculated plant with disease severity ≤11% was considered resistant (R) and disease severity &gt;11% was susceptible (S). From the 240 samples of rice leaf infected with BLB collected from West Nusa Tenggara, 232 Xoo isolates were obtained. The Xoo pathotype identification showed that pathotype IV was the most dominant in West Nusa Tenggara during the 2012 planting season, numbering 118 isolates or 51.0% out of the total isolates, followed by pathotype VIII (67 isolates or 29.0%), and pathotype III (47 isolates or 20.0%).</p>

2014 ◽  
Vol 6 (1) ◽  
pp. 254-257 ◽  
Author(s):  
Gokil Prasad Gangwar ◽  
A. P. Sinha

Present study was carried out to observe the effect of fungal and bacterial bioagents on total phenolic content in rice leaves pre-inoculated with Xanthomonas oryzae pv. oryzae and on disease severity of bacterial leaf blight of rice. Two commercial formulations of Trichoderma harzianum (PBA-1) and Pseudomonas fluorescens (PBA-2) and four formulations of fluorescent pseudomonads and Trichoderma spp. viz, P. fluorescens (Pf 83, rice leaf isolate), fluorescent pseudomonad (FLP 88, rice leaf isolate), T. harzianum (rice leaf isolate), Trichoderma spp. (isolate 40, isolated from rice field soil) were evaluated. Significantly higher mean value of total phenolic content of rice leaves was observed with the application of bioagent formulations as compared to check (pre-inoculated with X. oryzae pv. oryzae), chemical treatment and healthy plant. Maximum mean total phenolic content (342.22 μl/g) in rice leaves was observed with Pf 83, which was followed by PBA-2 (334.44 μl/g) and T. harzianum (330.00 μl/g). Decrease in disease severity of bacterial leaf blight was observed with the increase of total phenolic content in rice leaves which resulted in increased grain yield and 1000 grain weight.


2016 ◽  
Vol 5 (2) ◽  
pp. 63 ◽  
Author(s):  
Suparyono Suparyono ◽  
Sudir Sudir ◽  
Suprihanto Suprihanto

At present, bacterial leaf blight of rice caused by Xanthomonas oryzae pv. oryzae is highly damaging to rice production in Indonesia as most of the existing commercial rice varieties are susceptible to the existing  pathotypes of the bacteria. To solve  such problems, varietal rotation should be based on information on the existence and dominance of local pathotypes in a particular rice ecosystem. To obtain this information, a total of 117 isolates of X. oryzae pv. oryzae, collected from West Java, Central Java, and Yogyakarta, were evaluated for their pathotype variation on five differential rice varieties during the dry season of 2000. When disease severity was &lt; 10%, the reaction was classified as resistant (R) and when &gt; 11%, was susceptible (S). The data indicated that 3.42% of the isolates were pathotype III, 12.82% were pathotype IV, and 83.76% were pathotype VIII. In West Java, the bacterial pathotypes III, IV, and VIII were 4.94%, 14.81%, and 80.25%, respectively. In low elevation areas, 4.94%, 9.88%, and 45.68% were pathotypes III, IV, and VIII, respectively and in medium areas, 4.94% were pathotypes IV and 34.57% were pathotype VIII. In Central Java, no pathotype III was found, while pathotypes IV and VIII were as much as 4.52% and 90.48%, respectively. In low elevation areas, no pathotypes III was recovered, and a total of 9.53% and 76.19% were identified as pathotypes IV and VIII, respectively, and in medium areas only pathotype VIII (14.29%) was identified. In Yogyakarta, pathotypes IV and VIII were found. In low elevation areas, 6.67% and 93.33% were pathotypes IV and VIII, respectively and in medium areas, 14.29% and 85.71% were pathotypes IV and VIII, respectively. The data indicated that variation in pathotype composition over different locations was obvious and locally specific resistant varieties to the disease are needed in the management of this important bacterial disease in rice.


2016 ◽  
Vol 5 (2) ◽  
pp. 63
Author(s):  
Suparyono Suparyono ◽  
Sudir Sudir ◽  
Suprihanto Suprihanto

At present, bacterial leaf blight of rice caused by Xanthomonas oryzae pv. oryzae is highly damaging to rice production in Indonesia as most of the existing commercial rice varieties are susceptible to the existing  pathotypes of the bacteria. To solve  such problems, varietal rotation should be based on information on the existence and dominance of local pathotypes in a particular rice ecosystem. To obtain this information, a total of 117 isolates of X. oryzae pv. oryzae, collected from West Java, Central Java, and Yogyakarta, were evaluated for their pathotype variation on five differential rice varieties during the dry season of 2000. When disease severity was &lt; 10%, the reaction was classified as resistant (R) and when &gt; 11%, was susceptible (S). The data indicated that 3.42% of the isolates were pathotype III, 12.82% were pathotype IV, and 83.76% were pathotype VIII. In West Java, the bacterial pathotypes III, IV, and VIII were 4.94%, 14.81%, and 80.25%, respectively. In low elevation areas, 4.94%, 9.88%, and 45.68% were pathotypes III, IV, and VIII, respectively and in medium areas, 4.94% were pathotypes IV and 34.57% were pathotype VIII. In Central Java, no pathotype III was found, while pathotypes IV and VIII were as much as 4.52% and 90.48%, respectively. In low elevation areas, no pathotypes III was recovered, and a total of 9.53% and 76.19% were identified as pathotypes IV and VIII, respectively, and in medium areas only pathotype VIII (14.29%) was identified. In Yogyakarta, pathotypes IV and VIII were found. In low elevation areas, 6.67% and 93.33% were pathotypes IV and VIII, respectively and in medium areas, 14.29% and 85.71% were pathotypes IV and VIII, respectively. The data indicated that variation in pathotype composition over different locations was obvious and locally specific resistant varieties to the disease are needed in the management of this important bacterial disease in rice.


Weed Science ◽  
1977 ◽  
Vol 25 (5) ◽  
pp. 441-447 ◽  
Author(s):  
E. Inderawati ◽  
R. Heitefuss

Seven herbicides were tested for their effect on growth of Pyricularia oryzae Cavara, Hypochnus sasakii Shirai, and Xanthomonas oryzae Uyeda & Ishiyama Dowson on agar media and for subsequent influence on disease intensity on rice plants (Oryza sativa L.) in the greenhouse. The herbicides studied were: propanil 3′,4′-dichloro-propionanilide), NTN 5$006 [O-(2-nitro-4-methylphenyl)-O-ethyl-N-isopropyl-phosphor-amidothioate], simetryn [2,4-bis(ethylamino)-6-)methylthio)-s-triazine], terbutryn [2-(tert-butylamino)-4-(ethylamino)-6-(methylthio)-s-triazine], nitrofen (2,4-dichlorophenyl-p-nitrophenyl ether), molinate (S-ethyl hexahydro-1H-azepine-1-carbothioate), and aglypt (4-amino-3-methylthio-6-phenyl-1,2,4-triazine-5-on). The growth of P. oryzae, H. sasakii and X. oryzae on culture media containing 10 μg/ml commercial formulation of propanil was reduced to approximately 50% of the control. The other herbicides tested were less effective. Differences in disease severity produced on rice plants treated with the previously mentioned herbicides were in agreement with the results obtained by the culture method. The effect of simetryn and nitrofen on disease severity was stronger than expected from the small direct action on the pathogen in culture. It is suggested that the influence of these two compounds on the disease intensity is due to their effect on the host plant rather than the pathogen directly. Propanil was effective only if applied immediately or up to 1 day before inoculation, indicating that this herbicide is degraded on or within the rice leaves.


2020 ◽  
Vol 39 (1) ◽  
pp. 11
Author(s):  
Fatimah Fatimah ◽  
Joko Prasetiyono

<p>Bacterial leaf blight (BLB) caused by Xanthomonas oryzae pv oryzae (Xoo) is an important bacterial disease and very destructive to rice plant. BLB decreased rice production from 20%-30% up to 80%. Host-plant resistance is a cost-effective and environmentally safe approach to reduce yield loss. However the development of new rice variety by conventional selection would take several years. The genetic improvement in rice production considered as a vital program in order to ensure national food security. The availability of corresponding molecular marker makes it more precision and efficient by reducing the time required for selection. This present article highlights the molecular approach in breeding for BLB disease resistant rice varieties. In detail, it will be discussed the application of molecular marker assisted backcrossing and pyramiding gene resistance offered breeders to accelerate the rice breeding program for resistance to BLB. The pyramiding of three resistance BLB genes (xa5, Xa7, and Xa21and one gene (Xa4) as a background into two elite indica rice varieties, Ciherang and Inpari 13, was introduced successfully. The combining of conventional breeding, marker assisted backcrossing, disease evaluation, agronomic performance and yield has led the significant resistance of pyramid lines to Xoo Race III, IV and VIII in vegetative and generative phase while their yield potential was maintained (6-7 ton/ha). The current status of Ciherang-HDB and Inpari 13-HDB pyramid lines is the production of nucleoseeds and breeder seeds. This broad spectrum and durable resistance characteristic may help in controlling BLB disease in different region of Indonesia and it will facilitate the rice self-sustainability program.</p><p>Keywords: Rice, gene pyramiding, plant breeding, molecular marker.</p><p> </p><p><strong>Abstrak</strong></p><p>Penyakit hawar daun bakteri (HDB) yang disebabkan oleh Xanthomonas oryzae pv oryzae (Xoo) merupakan penyakit penting pada tanaman padi karena dapat menurunkan produksi padi rata-rata 20-30% bahkan dapat mencapai 80%. Penggunaan varietas tahan merupakan cara pengendalian yang paling efektif, ramah lingkungan, dan mudah dilakukan. Namun pengembangan varietas unggul baru melalui seleksi konvensional memerlukan waktu lebih lama. Perbaikan varietas padi perlu terus dikembangkan dalam mendukung ketahanan pangan dan kemandirian pangan nasional. Tersedianya marka molekuler membantu proses pemuliaan tanaman menjadi lebih presisi dan lebih efisien sehingga mengurangi waktu seleksi pada tanaman progeni. Tulisan ini memfokuskan pendekatan molekuler dalam pemuliaan varietas tahan penyakit HDB melalui piramida gen ketahanan untuk mempercepat progam pemuliaan padi tahan penyakit HDB. Kegiatan menggabungkan tiga gen ketahanan (xa5, Xa7, dan Xa21) dan satu gen (Xa4) sebagai background ke dalam padi varietas Ciherang dan Inpari-13 telah berhasil dilakukan. Melalui penggabungan beberapa pendekatan yaitu pemuliaan konvensional dan silang balik berbantu marka, evaluasi penyakit dan keragaan agronomi serta komponen hasil telah menunjukkan peningkatan ketahanan yang nyata pada galur-galur piramida Ciherang HDB dan Inpari-13 HDB pada tiga ras Xoo (Ras III, IV, dan VIII), baik pada fase vegetatif maupun generatif dengan potensi hasil tidak berbeda nyata dengan tetuanya (6-7 t/ha). Saat ini sudah diproduksi benih inti (NS) dan benih penjenis (BS) galur-galur piramida Ciherang HDB dan Inpari-13 HDB. Dengan demikian, galur-galur piramida memiliki spektrum yang luas dan mampu bertahan dalam jangka waktu lama sehingga dapat mengontrol penyakit HDB di berbagai wilayah Indonesia dan mendukung target pemerintah untuk mempertahankan swasembada beras secara berkelanjutan.</p><p>Kata kunci: Padi, piramida gen, pemuliaan tanaman, marka molekuler.<br /><br /></p><p> </p>


2016 ◽  
Vol 15 (2) ◽  
pp. 152 ◽  
Author(s):  
Wira Hadianto ◽  
Lukman Hakim ◽  
Bakhtiar .

The resistance rice genotypes against bacterial leaf blight (Xanthomonas oryzae pv. oryzae). The research was conducted to analyze genotypes of rice that were resistant to bacterial leaf blight (BLB) disease. The experiment was conducted at the screen house of Faculty of Agriculture, Syiah Kuala University, Banda Aceh from February to October 2014. This experiment was arranged in randomized complete block design with 73 treatments and 3 replications. IR-BB27 and IR-64 were used as control of resistant and susceptible varieties to BLB, respectively. The result showed that the bacterial isolates tested were virulent. The longest incubation period found in Limboto, Inpari 10, Situ Patenggang, Sirendeh Semantuk Wayla, Tamboen, Sepasie, Bontok and Arias. Genotypes Inpari 1, Limboto, Tuwoti, Inpari 10, Lekat Rambot Linuet, Rom Mokot, Paki Gajah, Tamboen, Bo 100, Sipasie, Bo Minyek, Bontok, Sirendeh Semantuk Wayla and Sambei showed resistance reaction to bacterial leaf blight disease.


2016 ◽  
Vol 17 (2) ◽  
pp. 80 ◽  
Author(s):  
Lina Herlina ◽  
Tiur S. Silitonga

<p>Field Selection on Several Rice Varieties for Resistance to Bacterial Leaf Blight strain IV and VIII. Bacterial leaf blight (BLB) on rice (Oryza sativa) caused by Xanthomonas oryzae pv. oryzae (Xoo) is the major obstruction for rice production. Powerful strategy to control BLB is generally conducted by planting resistant plant. Meanwhile, the main way to explore germplasm as the source of resistance gene is conducted by selection a wide rice varieties. Field selection for resistance to BLB on 150 rice-varieties (BB-Biogen collection) was conducted in 2009 in Cianjur. Three leaves and flag leaves of individual hills at vegetative and flowering stage were inoculated by clipping the leaf tip with scissors which had been connected with a suspension bottle of bacterial cells (109- 1010 cells/ml) of the isolates which represented bacterial groups (strain) IV and VIII, respectively. Each plant was inoculated with one race. Two weeks after inoculation, length of the lesion developed on the inoculated leaf was measured, as an index of severity of infection by BLB. This experiment was treated as Factorial-Randomized Completed Block Design (two factor-with 3 replications, respectively). The resistancyreaction to strain IV and VIII was observed as the variable tested, while the factors measured consists of plant-varieties and two bacterial strains. The results showed that 11 varieties with a resistance-reaction to Xoo strain IV, inwhich 5 varieties poses a consistent resistance-reaction, i.e: Pulu Bolong, Pelopor, Gombal, Barito and Kapuas. While resistancereaction to Xoo strain VIII obtained only one variety : IR42 (score-1), while 17 others showed intermediate resistancy (score-3).</p><p> </p><p><strong>Abstrak</strong></p><p>Penyakit hawar daun bakteri (HDB) yang disebabkan oleh Xanthomonas oryzae pv. oryzae (Xoo) pada padi (Oryza sativa) merupakan faktor pembatas upaya peningkatan produksi padi. Pencarian gen-gen tahan terhadap HDB sangat diperlukan untuk pengendalian penyakit tersebut. Seleksi ketahanan terhadap HDB dilakukan di Cianjur pada MT 2009 terhadap 150 varietas padi koleksi Bank Gen, BB-Biogen. Isolat Xoo yang diuji adalah strain IV dan VIII. Inokulasi dilakukan dua kali, yaitu pada fase vegetatif dan generatif dengan cara menggunting 3-5 cm dari ujung daun dan daun bendera dengan gunting yang telah dihubungkan dengan botol berisi suspensi Xoo strain IV dan VIII (109-1010 sel/ml). Rancangan percobaan yang digunakan dalam penelitian ini adalah acak kelompok faktorial dengan tiga ulangan. Sebagai varietas pembanding tahan digunakan IRBB7 dan pembanding rentan varietas Kencana Bali. Reaksi ketahanan tertinggi terhadap Xoo strain IV ditunjukkan oleh 11 varietas terpilih dengan reaksi agak tahan, lima varietas di antaranya menunjukkan reaksi yang konsisten agak tahan, yaitu varietas Pulu Bolong, Pelopor, Gombal, Barito, dan Kapuas. Reaksi &amp;lsquo;tahan&amp;rsquo; terhadap Xoo strain VIII ditunjukkan oleh satu varietas introduksi IR42. Untuk varietas terpilih dengan reaksi &amp;lsquo;agak tahan&amp;rsquo; terdapat 17 varietas.</p>


2020 ◽  
Vol 9 (3) ◽  
pp. 157-163
Author(s):  
Hafiz M. I. Arshad ◽  
Junaid A. Khan ◽  
Kamran Saleem ◽  
Syed S. Alam ◽  
Shahbaz T. Sahi

Bacterial leaf blight (BLB) is one of the most damaging diseases of rice in Asia and annually incurring significant yield loss to rice production in Pakistan. Management of disease required the information of BLB incidence and severity in basmati and non-basmati rice areas. The current study presented the observation of BLB disease incidence and severity in 19 major rice growing districts of Punjab. In this study, 9 Basmati growing and 10 non-basmati rice growing districts were surveyed from September to October in 2009, 2010, 2012, and 2013. Rice fields near to roadside, research stations and adjoining farmer fields were preferred for the survey. Each halt was after 10 km on the route depending upon the crop intensity. The general appearance of the field was observed for the absence or presence of BLB disease symptoms. The incidence of BLB was recorded as a percentage of plants infected in a field on a visual basis. For each field, 4 plants were observed at 5 points/hill along the diagonal transect for disease symptoms. The data of severity was recorded as the percentage of leaf area infected out of the total leaf area. Among the districts with basmati rice, the mean incidence of BLB was maximum in Gujranwala, Sheikhupura and Hafizabad followed by Mandi Bahauddin and Gujrat. A similar pattern of disease severity was observed in the basmati rice belt with maximum BLB mean severity in Gujranwala, Sheikhupura and Hafizabad having most of the field with a severity scale of 9. Overall, the disease trend showed that both the incidence and the severity were higher in 2010, 2012 and 2013 in the basmati rice belt. The ten districts, comprising of mostly non-basmati rice varieties showed relatively less BLB incidence and severity compared to basmati rice districts. The maximum mean incidence of 20-25% was observed in Faisalabad, Chiniot and Sahiwal in at least one year of the rice season. None of the field with BLB disease symptoms was observed in districts Okara, Khanewal and Bahawalpur during the 2012 and 2013 rice season. Maximum disease severity of mean value 3 was observed in Sahiwal during 2009 while the rest of the districts showed less than 2 mean severity during all rice growing season. Overall, in non-basmati rice districts, no specific trend of disease incidence and severity was apparent, however, the disease was present in very low magnitude or absent during the surveyed years. The information from this study is helpful in the selection of variety for basmati and non-basmati districts of Punjab and the adoption of appropriate disease management strategies.


2016 ◽  
Vol 12 (3) ◽  
pp. 89
Author(s):  
Andi Khaeruni ◽  
Erwin Najamuddin ◽  
Teguh Wijayanto ◽  
Syair Syair

Bacterial leaf blight disease caused by Xanthomonas oryzae pv. oryzae is an important rice disease in Indonesia, including in South East Sulawesi. The use of resistant varieties is one of the effective and environmentally friendly control strategies to suppress the disease. This study aimed to determine the level of resistance of some local rice varieties of South and Southeast Sulawesi against Xanthomonas oryzae pv. oryzae pathotypes IV, VIII and X. The study was conducted in a screen house involving 3 bacterial pathotypes and 11 local rice cultivars. Shearing method was used for inoculation of bacteria to leaf on vegetative and generative phases. Disease incidences were measured 3 weeks after inoculation, and the data was further used to determine the level of resistance of the tested rice cultivars. The results showed that incubation period of the disease was longer on Kelaca cultivar compared to other cultivars. On vegetative phase, this cultivar showed moderate resistant to pathotypes IV and X, and highly resistant to patotype VIII, whereas on the generative phase it showed moderate resistant to pathotypes IV and VII, and highly resistant to pathotype X. Therefore, Kelaca cultivar can be recommended for endemic areas of leaf blight in South and Southeast Sulawesi


2016 ◽  
Vol 19 (2) ◽  
pp. 53
Author(s):  
Siti Yuriyah ◽  
Dwinita W. Utami ◽  
Ida Hanarida

<p>Resistance Test of Promising Rice Lines Against Bacterial Leaf Blight (Xanthomonas oryzae pv. oryzae) Race III, IV, and VIII. Siti Yuriyah, Dwinita W. Utami, and Ida Hanarida. Development of new superior rice varieties resistant to bacterial leaf blight (BLB) has been conducted through utilizing of a wide rice germplasm, from crossing between IR64 and Oryza rufipogon. The aim of this study is to get promising rice lines that resistant to BLB race III, IV, and VIII. The experiments were conducted at greenhouse and Laboratory of Molecular Biology, ICABIOGRAD Bogor, using of 13 promising rice lines that have different levels of resistance to inoculum from pure cultures of BLB race III, IV and VIII. Of these 13 rice lines, six lines showed resistance to race III (Bio5-AC-Blas/BLB-03, Bio62-AC-Blas/BLB-03, Bio111-BC-PIR7, Bio129-BC-WBC, Bio148-Mamol, and Bio154-Mamol-Dro), one line showed resistance to race IV (Bio154-Mamol-Dro), and one line showed resistance to race VIII (Bio5-AC-Blas/BLB-03), with severity rate 1.8 to 8.1%. Of these improve lines Bio5-AC-Blas/BLB-3 and Bio 111-BCPir- 7, were released as new rice varieties, namely Inpari HDB and Inpari Blas, respectively.</p><p> </p><p><strong>Abstrak</strong></p><p>Perakitan varietas padi unggul baru tahan terhadap hawar daun bakteri (HDB) terus dilakukan melalui pemanfaatan sumber daya genetik yang luas. Saat ini telah dirakit galur-galur unggul yang berasal dari persilangan IR64 dan padi liar Rupifogon. Penelitian ini bertujuan untuk mengevaluasi ketahanan galur harapan padi terhadap penyakit HDB dari Ras III, IV, dan VIII. Percobaan dilakukan di rumah kaca dan Laboratorium Kelti Biologi Molekuler, BB Biogen, Bogor. Materi genetik yang digunakan adalah 13 galur harapan padi dan biakan murni dari Ras III, IV, dan VIII. Metode inokulasi dengan pengguntingan dan skoring ketahanan dilakukan sesuai dengan sistem penilaian dari Yashitola et al. (1997). Dari 13 galur padi harapan yang diuji, diperoleh enam galur tahan terhadap Ras III (Bio5-AC-Blas/BLB-03, Bio62-AC-Blas/BLB-03, Bio111- BC-PIR7, Bio129-BC-WBC, Bio148-Mamol-Dro, dan Bio154-Mamol-Dro), satu galur tahan terhadap Ras IV (Bio154-Mamol-Dro) dan satu galur tahan terhadap Ras VIII (Bio5-AC-Blas/BLB-03), dengan tingkat keparahan sebesar 1,8-8,1%. Dalam perkembangannya, dua dari galur harapan, yaitu galur Bio5-AC-Blas/BLB-03 dan Bio111-BC-Pir-7 disetujui untuk dilepas sebagai varietas Inpari HDB dan Inpari Blas.</p>


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