scholarly journals Molecualr Characterization And Varietal Identification For Multiple Abiotic Stress Tolerance In Rice (Oryza sativa L.)

2021 ◽  
Author(s):  
Alif Ali ◽  
Beena R. ◽  
Chennamsetti Lakshmi Naga Manikanta
Keyword(s):  
Abiotic Stress ◽  
Stress Tolerance ◽  
Ssr Markers ◽  
Abiotic Stresses ◽  
Upland Rice ◽  
Oryza Sativa L ◽  
Population Analysis ◽  
Abiotic Stress Tolerance ◽  
Rice Varieties ◽  
Rice Genotypes

Abstract Coexistence of two or more abiotic stresses is common in most of the rainfed lowland and upland rice growing areas of India and worldwide. Rice production under these conditions is not sustainable. Identification and development of multiple abiotic stress tolerant rice varieties are to be addressed. Here we tried to identify multiple abiotic stress tolerant varieties from a collection of earlier identified varieties for single stress and validated the known SSR markers for stress tolerance. Twenty rice genotypes were evaluated for individual abiotic stress such as drought, salinity and temperature initially and the tolerant three genotypes in each case were further evaluated for combination of stresses various physio-morphological and biochemical parameters were recorded . Among the genotypes evaluated for combination of stresses, PTB-7 was found to be tolerant for drought and salinity, Nagina-22 was tolerant against temperature and salinity. However, the seeds did not germinate in the presence of all three stresses simultaneously.. Twenty rice varieties viz ., Chomala, MO-16, PTB-35, PTB-60, PTB-39, PTB-55, PTB-30, PTB-7, CRdhan307, Apo, Vyttila-3, Vyttila-4, Vyttila-5, Vyttila-6, Vyttila-7, Vyttila-8, Vyttila-9, Vyttila-10, Nagina-22, and NL-44 were further investigated using microsatellite markers to confirm the genotypic level of tolerance to combination of abiotic stresses. Rice genotypes were screened using 30 reported simple sequence repeat (SSR) markers that are linked to drought, salinity and temperature. Molecular marker analysis of rice genotypes also confirmed that RM8904 and RM1287 were associated with salinity tolerance, RM2612, RM6100 and RM5749 were linked to high temperature tolerant trait. Population analysis also revealed that there is five subpopulation among rice genotypes.

scholarly journals Nitrogen Use Efficiency in Rice under Abiotic Stress: Plant Breeding Approach

2020 ◽  
Author(s):  
Satyen Mondal ◽  
Jamil Hasan ◽  
Priya Lal Biswas ◽  
Emam Ahmed ◽  
Tuhin Halder ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Nitrogen Use Efficiency ◽  
Abiotic Stresses ◽  
Molecular Mechanisms ◽  
Oryza Sativa L ◽  
Abiotic Stress Tolerance ◽  
Rice Variety ◽  
Rice Varieties ◽  
Nitrogen Use ◽  
Use Efficiency

Nitrogenous fertilizer has remarkably improved rice (Oryza sativa L.) yield across the world since its discovery by Haber-Bosch process. Due to climate change, future rice production will likely experience a wide range of environmental plasticity. Nitrogen use efficiency (NUE) is an important trait to confer adaptability across various abiotic stresses such as flooding, drought and salinity. The problem with the increased N application often leads to a reduction in NUE. New solutions are needed to simultaneously increase yield and maximize the NUE of rice. Despite the differences among flooding, salinity and drought, these three abiotic stresses lead to similar responses in rice plants. To develop abiotic stress tolerant rice varieties, speed breeding seems a plausible novel approach. Approximately 22 single quantitative trait loci (QTLs) and 58 pairs of epistatic QTLs are known to be closely associated with NUE in rice. The QTLs/genes for submergence (SUB1A) tolerance, anaerobic germination (AG, TPP7) potential and deepwater flooding tolerance (SK1, SK2) are identified. Furthermore, phytochrome-interacting factor-like14 (OsPIL14), or loss of function of the slender rice1 (SLR1) genes enhance salinity tolerance in rice seedlings. This review updates our understanding of the molecular mechanisms of abiotic stress tolerance and discusses possible approaches for developing N-efficient rice variety.

scholarly journals Down-Regulation of SlGRAS10 in Tomato Confers Abiotic Stress Tolerance

Genes ◽  
2021 ◽  
Vol 12 (5) ◽  
pp. 623
Author(s):  
Sidra Habib ◽  
Yee Yee Lwin ◽  
Ning Li
Keyword(s):  
Salt Stress ◽  
Abiotic Stress ◽  
Plant Growth ◽  
Stress Tolerance ◽  
Abiotic Stresses ◽  
Abiotic Stress Tolerance ◽  
Functional Characterization ◽  
Flavonoid Biosynthesis ◽  
Ros Scavenging ◽  
Down Regulation

Adverse environmental factors like salt stress, drought, and extreme temperatures, cause damage to plant growth, development, and crop yield. GRAS transcription factors (TFs) have numerous functions in biological processes. Some studies have reported that the GRAS protein family plays significant functions in plant growth and development under abiotic stresses. In this study, we demonstrated the functional characterization of a tomato SlGRAS10 gene under abiotic stresses such as salt stress and drought. Down-regulation of SlGRAS10 by RNA interference (RNAi) produced dwarf plants with smaller leaves, internode lengths, and enhanced flavonoid accumulation. We studied the effects of abiotic stresses on RNAi and wild-type (WT) plants. Moreover, SlGRAS10-RNAi plants were more tolerant to abiotic stresses (salt, drought, and Abscisic acid) than the WT plants. Down-regulation of SlGRAS10 significantly enhanced the expressions of catalase (CAT), peroxidase (POD), and superoxide dismutase (SOD) to reduce the effects of reactive oxygen species (ROS) such as O2− and H2O2. Malondialdehyde (MDA) and proline contents were remarkably high in SlGRAS10-RNAi plants. Furthermore, the expression levels of chlorophyll biosynthesis, flavonoid biosynthesis, and stress-related genes were also enhanced under abiotic stress conditions. Collectively, our conclusions emphasized the significant function of SlGRAS10 as a stress tolerate transcription factor in a certain variety of abiotic stress tolerance by enhancing osmotic potential, flavonoid biosynthesis, and ROS scavenging system in the tomato plant.

CRISPR-mediated genome editing in maize for improved abiotic stress tolerance.

2021 ◽  
pp. 405-420
Author(s):  
Ali Razzaq ◽  
Ghulam Mustafa ◽  
Muhammad Amjad Ali ◽  
Muhammad Sarwar Khan ◽  
Faiz Ahmad Joyia
Keyword(s):  
Abiotic Stress ◽  
Stress Tolerance ◽  
Genome Editing ◽  
Abiotic Stresses ◽  
Abiotic Stress Tolerance ◽  
Maize Yield ◽  
Maize Genome ◽  
Yield Improvement ◽  
Maize Cultivars ◽  
Genome Manipulation

Abstract This chapter discusses the applications of CRISPR-mediated genome editing to improve the abiotic stress tolerance (such as drought, heat, waterlogging and cold tolerance) of maize. CRISPR/Cas9 has great potential for maize genome manipulation at desired sites. By using CRISPR/Cas9-mediated genome editing, numerous genes can be targeted to produce elite maize cultivars that minimize the challenges of abiotic stresses. In the future, more precise and accurate variants of the CRISPR/Cas9 toolbox are expected to be used for maize yield improvement.

Identification of rice genotypes for seedling stage multiple abiotic stress tolerance

2020 ◽  
Vol 25 (4) ◽  
pp. 697-706 ◽  
Author(s):  
Tinu Thomas ◽  
J. Purushothaman ◽  
R. Janarthanan ◽  
N. Anusuya ◽  
Prasanna Geetha Medisetti ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Stress Tolerance ◽  
Abiotic Stress Tolerance ◽  
Seedling Stage ◽  
Rice Genotypes

scholarly journals Harnessing the hidden genetic diversity for improving multiple abiotic stress tolerance in rice (Oryza sativa L.)

PLoS ONE ◽  
2017 ◽  
Vol 12 (3) ◽  
pp. e0172515 ◽  
Author(s):  
Jauhar Ali ◽  
Jian-Long Xu ◽  
Yong-Ming Gao ◽  
Xiu-Fang Ma ◽  
Li-Jun Meng ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Oryza Sativa ◽  
Abiotic Stress ◽  
Stress Tolerance ◽  
Oryza Sativa L ◽  
Abiotic Stress Tolerance

scholarly journals Genome wide identification of NAC transcription factors and their role in abiotic stress tolerance in Chenopodium quinoa

2019 ◽  
Author(s):  
Nouf Owdah Alshareef ◽  
Elodie Rey ◽  
Holly Khoury ◽  
Mark Tester ◽  
Sandra M. Schmöckel
Keyword(s):  
Transcription Factor ◽  
Transcription Factors ◽  
Abiotic Stress ◽  
Stress Tolerance ◽  
Abiotic Stresses ◽  
Abiotic Stress Tolerance ◽  
Chenopodium Quinoa ◽  
Phosphate Starvation ◽  
Water Deficiency ◽  
Genome Wide

AbstractChenopodium quinoa Willd. (quinoa) is a pseudocereal with high nutritional value and relatively high tolerance to several abiotic stresses, including water deficiency and salt stress, making it a suitable plant for the study of mechanisms of abiotic stress tolerance. NAC (NAM, ATAF and CUC) transcription factors are involved in a range of plant developmental processes and in the response of plants to biotic and abiotic stresses. In the present study, we perform a genome-wide comprehensive analysis of the NAC transcription factor gene family in quinoa. In total, we identified 107 quinoa NAC transcription factor genes, distributed equally between sub-genomes A and B. They are phylogenetically clustered into two major groups and 18 subgroups. Almost 75% of the identified CqNAC genes were duplicated two to seven times and the remaining 25% of the CqNAC genes were found as a single copy. We analysed the transcriptional responses of the identified quinoa NAC TF genes in response to various abiotic stresses. The transcriptomic data revealed 28 stress responsive CqNAC genes, where their expression significantly changed in response to one or more abiotic stresses, including salt, water deficiency, heat and phosphate starvation. Among these stress responsive NACs, some were previously known to be stress responsive in other species, indicating their potentially conserved function in response to abiotic stress across plant species. Six genes were differentially expressed specifically in response to phosphate starvation but not to other stresses, and these genes may play a role in controlling plant responses to phosphate deficiency. These results provide insights into quinoa NACs that could be used in the future for genetic engineering or molecular breeding.

scholarly journals Mining Fiskeby III and Mandarin (Ottawa) Expression Profiles to Understand Iron Stress Tolerant Responses in Soybean

2021 ◽  
Vol 22 (20) ◽  
pp. 11032
Author(s):  
Jamie A. O’Rourke ◽  
Michael J. Morrisey ◽  
Ryan Merry ◽  
Mary Jane Espina ◽  
Aaron J. Lorenz ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Iron Deficiency ◽  
Gene Silencing ◽  
Stress Tolerance ◽  
Abiotic Stresses ◽  
Yield Loss ◽  
Abiotic Stress Tolerance ◽  
Iron Stress ◽  
Rna Seq ◽  
Virus Induced Gene Silencing

The soybean (Glycine max L. merr) genotype Fiskeby III is highly resistant to a multitude of abiotic stresses, including iron deficiency, incurring only mild yield loss during stress conditions. Conversely, Mandarin (Ottawa) is highly susceptible to disease and suffers severe phenotypic damage and yield loss when exposed to abiotic stresses such as iron deficiency, a major challenge to soybean production in the northern Midwestern United States. Using RNA-seq, we characterize the transcriptional response to iron deficiency in both Fiskeby III and Mandarin (Ottawa) to better understand abiotic stress tolerance. Previous work by our group identified a quantitative trait locus (QTL) on chromosome 5 associated with Fiskeby III iron efficiency, indicating Fiskeby III utilizes iron deficiency stress mechanisms not previously characterized in soybean. We targeted 10 of the potential candidate genes in the Williams 82 genome sequence associated with the QTL using virus-induced gene silencing. Coupling virus-induced gene silencing with RNA-seq, we identified a single high priority candidate gene with a significant impact on iron deficiency response pathways. Characterization of the Fiskeby III responses to iron stress and the genes underlying the chromosome 5 QTL provides novel targets for improved abiotic stress tolerance in soybean.

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