scholarly journals Nordic research infrastructures for plant phenotyping

2018 ◽  
Vol 27 (1) ◽  
Author(s):  
Erik Alexandersson ◽  
Markku Keinänen ◽  
Aakash Chawade ◽  
Kristiina Himanen

Plant phenomics refers to the systematic study of plant phenotypes. Together with closely monitored, controlled climates, it provides an essential component for the integrated analysis of genotype-phenotype-environment interactions. Currently, several plant growth and phenotyping facilities are under establishment globally, and numerous facilities are already in use. Alongside the development of the research infrastructures, several national and international networks have been established to support shared use of the new methodology. In this review, an overview is given of the Nordic plant phenotyping and climate control facilities. Since many areas of phenomics such as sensor-based phenotyping, image analysis and data standards are still developing, promotion of educational and networking activities is especially important. These facilities and networks will be instrumental in tackling plant breeding and plant protection challenges. They will also provide possibilities to study wild species and their ecological interactions under changing Nordic climate conditions.

Buildings ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 152
Author(s):  
Karin Kompatscher ◽  
Rick P. Kramer ◽  
Bart Ankersmit ◽  
Henk L. Schellen

The majority of cultural heritage is stored in archives, libraries and museum storage spaces. To reduce degradation risks, many archives adopt the use of archival boxes, among other means, to provide the necessary climate control and comply with strict legislation requirements regarding temperature and relative air humidity. A strict ambient indoor climate is assumed to provide adequate environmental conditions near objects. Guidelines and legislation provide requirements for ambient indoor climate parameters, but often do not consider other factors that influence the near-object environment, such as the use of archival boxes, airflow distribution and archival rack placement. This study aimed to provide more insight into the relation between the ambient indoor conditions in repositories and the hygrothermal conditions surrounding the collection. Comprehensive measurements were performed in a case study archive to collect ambient, local and near-object conditions. Both measurements and computational fluid dynamics (CFD) modeling were used to research temperature/relative humidity gradients and airflow distribution with a changing rack orientation, climate control strategy and supply as well as exhaust set-up in a repository. The following conclusions are presented: (i) supplying air from one air handling unit to multiple repositories on different floors leads to small temperature differences between them. Differences in ambient and local climates are noticed; (ii) archival boxes mute and delay variations in ambient conditions as expected—however, thermal radiation from the building envelope may have a large influence on the climate conditions in a box; (iii) adopting night reduction for energy conservation results in an increased influence of the external climate, with adequate insulation, this effect should be mitigated; and (iv) the specific locations of the supply air and extraction of air resulted in a vertical gradient of temperature and insufficient mixing of air, and adequate ventilation strategies should enhance sufficient air mixing in combination with the insulation of external walls, and gradient forming should be reduced.


2021 ◽  
Vol 7 ◽  
Author(s):  
Hanna Ćwiek-Kupczyńska ◽  
Paweł Krajewski

This document is an edited version of the original application for inclusion of a strategic research infrastructure project in the Polish Roadmap for Research Infrastructures. The application entitled "Polish network of research infrastructure for plant phenotyping" was submitted to the Polish Ministry of Science and Higher Education in June 2018; the project was not included in the Roadmap published in January 2020. The original document did not contain this abstract.


2021 ◽  
Author(s):  
Fransje van Oorschot ◽  
Ruud van der Ent ◽  
Andrea Alessandri ◽  
Markus Hrachowitz

<p>The root zone storage capacity (S<sub>r</sub> ) is the maximum volume of water in the subsurface that can potentially be accessed by vegetation for transpiration. It influences the seasonality of transpiration as well as fast and slow runoff processes. Many studies have shown that S<sub>r</sub> is heterogeneous as controlled by local climate conditions, which affect vegetation strategies in sizing their root system able to support plant growth and to prevent water shortages. Root zone parameterization in most land surface models does not account for this climate control on root development, being based on look-up tables that prescribe worldwide the same root zone parameters for each vegetation class. These look-up tables are obtained from measurements of rooting structure that are scarce and hardly representative of the ecosystem scale. The objective of this research was to quantify and evaluate the effects of a climate-controlled representation of S<sub>r</sub> on the  water fluxes modeled by the HTESSEL land surface model. Climate controlled S<sub>r</sub> was here estimated with the "memory method" (hereinafter MM) in which S<sub>r</sub> is derived from the vegetation's memory of past root zone water storage deficits. S<sub>r,MM</sub> was estimated for 15 river catchments over Australia across three contrasting climate regions: tropical, temperate and Mediterranean. Suitable representations of S<sub>r,MM</sub> were then implemented in HTESSEL (hereinafter MD) by accordingly modifying the soil depths to obtain a model S<sub>r,MD </sub>that matches S<sub>r,MM</sub> in the 15 catchments. In the control version of HTESSEL (hereinafter CTR), S<sub>r,CTR</sub> was larger than S<sub>r,MM</sub> in 14 out of 15 catchments. Furthermore, the variability among the individual catchments of S<sub>r,MM</sub> (117—722 mm) was considerably larger than of S<sub>r,CTR</sub> (491—725 mm). The HTESSEL MD version resulted in a significant and consistent improvement version of the modeled monthly seasonal climatology (1975--2010) and inter-annual anomalies of river discharge compared with observations. However, the effects on biases in long-term annual mean fluxes were small and mixed. The modeled monthly seasonal climatology of the catchment discharge improved in MD compared to CTR: the correlation with observations increased significantly from 0.84 to 0.90 in tropical catchments, from 0.74 to 0.86 in temperate catchments and from 0.86 to 0.96 in Mediterranean catchments. Correspondingly, the correlations of the inter-annual discharge anomalies improved significantly in MD from 0.74 to 0.78 in tropical catchments, from 0.80 to 0.85 in temperate catchments and from 0.71 to 0.79 in Mediterranean catchments. Based on these results, we believe that a global application of climate controlled root zone parameters has the potential to improve the timing of modeled water fluxes by land surface models, but a significant reduction of biases is not expected. </p>


Author(s):  
Vincenzo Marcotrigiano ◽  
Sandro Cinquetti ◽  
Riccardo Flamini ◽  
Mirko De Rosso ◽  
Luca Ferraro ◽  
...  

In Italy, wine production is considered a sector of excellence, where the wines’ appreciable sensory features are favored by environmental factors, including weather and climate conditions, which benefit territories with a specific vocation. The whole chain involves many economic and agri-food sector operators, and requires an in-depth assessment of specific risks for identifying critical points, keeping the entire production process under control, and ensuring product traceability. This article describes the results of a pilot study conducted in the Prosecco DOCG (Designations of Controlled and Guaranteed Origin) area, concerning the detection of residues of plant protection products in fifty wine bottles. Although considerably below the maximum residue levels, all the samples tested were positive, ranging from two to five active substances detected in each sample. In addition to the provisions of the European Community legislation, this paper critically evaluates some best practices models that are already used by the Wine Federations of Italy, with the aim of identifying advantages of and areas for improvement in production methods, applicable to raw materials reception, rasping, storage, and bottling phases, in order to guarantee product safety and quality.


2019 ◽  
Vol 16 (23) ◽  
pp. 4627-4645 ◽  
Author(s):  
Boris Bonn ◽  
Ruth-Kristina Magh ◽  
Joseph Rombach ◽  
Jürgen Kreuzwieser

Abstract. Emissions of volatile organic compounds (VOCs) by biogenic sources depend on different environmental conditions. Besides temperature and photosynthetic active radiation (PAR), the available soil water can be a major factor controlling the emission flux. This factor is expected to become more important under future climate conditions, including prolonged drying–wetting cycles. In this paper we use results of available studies on different tree types to set up a parameterization describing the influence of soil water availability (SWA) on different isoprenoid emission rates. Investigating SWA effects on isoprene (C5H8), monoterpene (C10H16) and sesquiterpene (C15H24) emissions separately, it is obvious that different plant processes seem to control the individual emission fluxes, providing a measure to which plants can react to stresses and interact. The SWA impact on isoprene emissions is well described by a biological growth type curve, while the sum of monoterpenes displays a hydraulic conductivity pattern reflecting the plant's stomata opening. However, emissions of individual monoterpene structures behave differently to the total sum, i.e., the emissions of some increase, whereas others decline at decreasing SWA. In addition to a rather similar behavior to that of monoterpene emissions, total sesquiterpene fluxes of species adapted to drought stress tend to reveal a rise close to the wilting point, protecting against oxidative damages. Considering further VOCs as well, the total sum of VOCs tends to increase at the start of severe drought conditions until resources decline. In contrast to declining soil water availability, OH and ozone reactivity are enhanced. Based on these observations, a set of plant protection mechanisms are displayed for fighting drought stress and imply notable feedbacks on atmospheric processes such as ozone, aerosol particles and cloud properties. With increasing lengths of drought periods, declining storage pools and plant structure effects yield different emission mixtures and strengths. This drought feedback effect is definitely worth consideration in climate feedback descriptions and for accurate climate predictions.


2021 ◽  
Vol 13 (18) ◽  
pp. 10433
Author(s):  
Gloria Alexandra Ortiz Rocha ◽  
Maria Angelica Pichimata ◽  
Edwin Villagran

The use of protected agriculture structures in tropical and subtropical countries is the main alternative for intensification of agricultural production selected by producers. In general, in these regions, passive and plastic-covered structures predominate, with natural ventilation as the only method of climate control. This phenomenon has been widely studied in different types of structures using computational fluid dynamics (CFD) simulation. Therefore, this review aimed to collect and analyze the publications generated in this field of knowledge between 2010 and 2020. The search for information included the main academic databases available on the web and the analysis was carried out using bibliometric techniques, from which it was possible to identify details inherent to the scientific production, such as countries of origin, main authors, journals, and citations. Likewise, a detailed breakdown of the relevant technical information of the three phases of numerical simulation, such as preprocessing, processing, and postprocessing, was carried out. A compilation of 118 papers published in 65 journals, written by 256 authors, originating from 24 countries was achieved, where it was evident that Mexico and Colombia were the countries with the highest scientific production in the last decade. These papers analyzed, together, a total of 17 different types of structures where polyethylene-covered greenhouses predominated, with steady state simulations, for daytime climate conditions and without the presence of crops. Within the current and future research trends, the predominance of studies analyzing passive climate control methods, new models of insect-proof mesh-house structures, and, finally, studies focused on the structural analysis of greenhouses was found.


Author(s):  
Barbara Krochmal-Marczak ◽  
Barbara Sawicka ◽  
Bernadetta Bienia ◽  
Małgorzata Górka ◽  
Olutosin A. Otekunrin

The aim of this research was to determine the economic efficiency of sweet potato production in Polish conditions (49°49′ N, 21°50′ E). The study was based on the results of a 3-year (2017–2019) field experiment conducted in slightly acidic brown earth. The experiment used the random subblocks method, in which the main experimental factors were cultivation technologies: A) traditional, with no cover, B) with the use of PP spunbond nonwoven. Secondary factors included 5 cultivars of sweet potato of all earliness classes (Goldstar, Carmen Rubin, Satsumo Imo, Beauregard, White Triumph). Constant organic and mineral fertilization was used, and cultivation was carried out in accordance with normal agricultural practice. The propagating material included rooted cuttings of sweet potato from in vitro propagation, planted with 50 x 75 cm spacing. The economic effect of production was determined by all experimental factors. The profitability of production was increased by the use of PP spunbond nonwoven. The most beneficial economic factors were achieved when growing the Beauregard cultivar, and the least – when growing White Triumph. The largest cost of sweet potato commercial production were sweet potato cuttings, which amounted to 56%, and the smallest – plant protection products – 1% of direct costs per 1 ha of crops. Sweet potato production in Polish soil and climate conditions between 2017–2019 turned out to be cost-effective.


2019 ◽  
Author(s):  
Boris Bonn ◽  
Ruth-Kristina Magh ◽  
Joseph Rombach ◽  
Jürgen Kreuzwieser

Abstract. Emissions of volatile organic compounds (VOCs) by biogenic sources depend on different environmental conditions. Besides temperature and photosynthetic active radiation (PAR), the available soil water can be a major factor, controlling the emission flux. This factor is expected to become more important under future climate conditions including prolonged drying-wetting cycles. In this paper we use results of available studies on different tree types to set up a parameterization describing the influence of soil water availability (SWA) on different isoprenoid emission rates. Investigating SWA effects on isoprene (C5H8), mono- (C10H16) and sesquiterpene (C15H24) emissions separately, it is obvious that different plant processes seem to control the individual emission fluxes providing a measure of plants to react on stresses and to interact. The SWA impact on isoprene emissions is well described by a biological growth type curve, while the sum of monoterpenes displays a hydraulic conductivity pattern reflecting the plants stomata opening. However, emissions of individual monoterpene structures behave differently to the total sum, i.e. the emissions of some increase whereas of others decline at decreasing SWA. In addition to a rather similar behaviour as of monoterpene emissions, total sesquiterpene fluxes of species adapted to drought stress tend to reveal a rise close to the wilting point protecting against oxidative damages. Considering further VOCs too, the total sum of VOCs tends to increase at the start of severe drought conditions until resources decline. On the contrary, OH and ozone reactivity enhance. Based on these observations a set of plant protection mechanism displays for drought stress and implies notable feedbacks on atmospheric processes such as ozone, aerosol particles and cloud properties. With progressing length of drought periods declining storage pools and plant structure effects yield different emission mixtures and strengths. This drought feedback effect is definitely worth consideration in climate feedback descriptions and for accurate climate predictions.


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