scholarly journals Isolasi dan Identifikasi Jamur Pada Buah Cabai Rawit (Capsicum frutescens L.) Yang Bergejala Antraknosa Dari Lahan Pertanian Di Dusun Jeruk

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Widya Anggraeni Elvi Rusmiyanto PW, Rahmawati

Anthracnose is a disease that often attacks cayenne pepper (Capsicum frutescens L). This study aims to determine the species of fungus from the fruit of cayenne pepper with anthracnose symptoms. Fungal isolation was carried out using the direct plating method and fungal identification was carried out by observing the macromorphological and micromorphological characteristics of the fungi. The results showed that two fungal species were obtained, namely Colletotrichum sp (WA2) and Idriella sp. (WA3). Colletotrichum sp. (WA2) is a pathogenic fungus that causes anthracnose and Idriella sp (WA3) is a saprophytic fungus, but it is also known to be capable of being a pathogenic fungus.

2020 ◽  
Vol 2020 ◽  
pp. 1-7
Author(s):  
Ling Bai ◽  
Liu He ◽  
Penghao Yu ◽  
Jiaoyang Luo ◽  
Meihua Yang ◽  
...  

Eupolyphaga sinensis Walker is a valuable traditional Chinese animal medicine first recorded in Shennong Bencao. Previous research has shown that E. sinensis is easily contaminated by aflatoxins (AFs), which are highly toxic mycotoxins, during harvest, storage, and transport, thereby posing a considerable threat to consumer health. Most often, these AFs are produced by Aspergillus species. In this study, we contrast the traditional culture-based dilution plating method to the high-throughput sequencing (HTS) technology for fungal identification in TCM E. sinensis. Both of the methods used internal transcribed spacer 1 (ITS1) and calmodulin (CaM) sequencing for fungal molecular identification. The new CaM primer we designed in the study is suitable for MiSeq PE300 sequencing used for identification of Aspergillus species in community DNA samples. More fungal species were found in the E. sinensis samples based on HTS than those found using the culture-based dilution plating method. Overall, combining the sequencing power of ITS1 and CaM is an effective method for the detection and monitoring of potential toxigenic Aspergillus species in E. sinensis. In conclusion, HTS can be used to obtain a large amount of sequencing data about fungi contaminating animal medicine, allowing earlier detection of potential toxigenic fungi and ensuring the efficient production and safety of E. sinensis.


2004 ◽  
Vol 34 (1) ◽  
pp. 120-130 ◽  
Author(s):  
Vaidotas Lygis ◽  
Rimvydas Vasiliauskas ◽  
Jan Stenlid

Persistence of the root rot pathogen Heterobasidion annosum (Fr.) Bref. s.s. on infested areas and its transfer to a forest regeneration was studied in three forest sites in eastern Lithuania. The sites represented H. annosum disease centres in Pinus sylvestris L. stands, which were clear-felled and replanted with Betula pendula Roth 25 years prior to our study. Fungal isolation from trees and stumps on each site was performed on both replanted B. pendula and surrounding P. sylvestris from the previous generation. Low productivity of B. pendula stands (45.0–76.1 m3·ha–1), high mortality rates, and comparatively low vigor of trees (measured as crown densities) indicated a strong impact of root rot. Based on somatic incompatibility tests, we detected large spreading areas of clones of H. annosum (up to 48 m across) and old (35- to 40-year-old) clonal individuals. Territorial clones covered areas that encompassed both previous stands of P. sylvestris and current stands of B. pendula. Our results showed that H. annosum is able to persist in root systems of diseased trees for decades and readily attack birch replanted on infested sites. In addition, a total of 83 fungal species (out of 398 isolates) was found as a result of sampling 508 B. pendula, 49 P. sylvestris, 21 Juniperus communis L., and 1 Salix cinerea L. trees.


2002 ◽  
Vol 68 (4) ◽  
pp. 1631-1638 ◽  
Author(s):  
A. Leclercq ◽  
C. Wanegue ◽  
P. Baylac

ABSTRACT A 24-h direct plating method for fecal coliform enumeration with a resuscitation step (preincubation for 2 h at 37 ± 1°C and transfer to 44 ± 1°C for 22 h) using fecal coliform agar (FCA) was compared with the 24-h standardized violet red bile lactose agar (VRBL) method. FCA and VRBL have equivalent specificities and sensitivities, except for lactose-positive non-fecal coliforms such as Hafnia alvei, which could form typical colonies on FCA and VRBL. Recovery of cold-stressed Escherichia coli in mashed potatoes on FCA was about 1 log unit lower than that with VRBL. When the FCA method was compared with standard VRBL for enumeration of fecal coliforms, based on counting carried out on 170 different food samples, results were not significantly different (P > 0.05). Based on 203 typical identified colonies selected as found on VRBL and FCA, the latter medium appears to allow the enumeration of more true fecal coliforms and has higher performance in certain ways (specificity, sensitivity, and negative and positive predictive values) than VRBL. Most colonies clearly identified on both media were E. coli and H. alvei, a non-fecal coliform. Therefore, the replacement of fecal coliform enumeration by E. coli enumeration to estimate food sanitary quality should be recommended.


1985 ◽  
Vol 21 (6) ◽  
pp. 955-958 ◽  
Author(s):  
D F Welch ◽  
R K Scribner ◽  
D Hensel

1999 ◽  
Vol 43 (8) ◽  
pp. 1845-1855 ◽  
Author(s):  
Thomas D. Gootz ◽  
Richard P. Zaniewski ◽  
Suzanne L. Haskell ◽  
Frank S. Kaczmarek ◽  
Alison E. Maurice

ABSTRACT Frequencies of mutation to resistance with trovafloxacin and four other quinolones were determined with quinolone-susceptibleStaphylococcus aureus RN4220 by a direct plating method. First-step mutants were selected less frequently with trovafloxacin (1.1 × 10−10 at 2 to 4× the MIC) than with levofloxacin or ciprofloxacin (3.0 × 10−7 to 3.0 × 10−8 at 2 to 4× the MIC). Mutants with a change in GrlA (Ser80→Phe or Tyr) were most commonly selected with trovafloxacin, ciprofloxacin, levofloxacin, or pefloxacin. First-step mutants were difficult to select with sparfloxacin; however, second-step mutants with mutations in gyrA were easily selected when a preexisting mutation in grlA was present. Against 29 S. aureus clinical isolates with known mutations in gyrA and/or grlA, trovafloxacin was the most active quinolone tested (MIC at which 50% of isolates are inhibited [MIC50] and MIC90, 1 and 4 μg/ml, respectively); in comparison, MIC50s and MIC90s were 32 and 128, 16 and 32, 8 and 32, and 128 and 256 μg/ml for ciprofloxacin, sparfloxacin, levofloxacin, and pefloxacin, respectively. Strains with a mutation in grlA only were generally susceptible to all of the quinolones tested. For mutants with changes in both grlA and gyrA MICs were higher and were generally above the susceptibility breakpoint for ciprofloxacin, sparfloxacin, levofloxacin, and pefloxacin. Addition of reserpine (20 μg/ml) lowered the MICs only of ciprofloxacin fourfold or more for 18 of 29 clinical strains. Topoisomerase IV and DNA gyrase genes were cloned from S. aureus RN4220 and from two mutants with changes in GrlA (Ser80→Phe and Glu84→Lys). The enzymes were overexpressed in Escherichia coli GI724, purified, and used in DNA catalytic and cleavage assays that measured the relative potency of each quinolone. Trovafloxacin was at least five times more potent than ciprofloxacin, sparfloxacin, levofloxacin, or pefloxacin in stimulating topoisomerase IV-mediated DNA cleavage. While all of the quinolones were less potent in cleavage assays with the altered topoisomerase IV, trovafloxacin retained its greater potency relative to those of the other quinolones tested. The greater intrinsic potency of trovafloxacin against the lethal topoisomerase IV target in S. aureus contributes to its improved potency against clinical strains of S. aureus that are resistant to other quinolones.


2008 ◽  
Vol 91 (5) ◽  
pp. 1138-1141 ◽  
Author(s):  
Willis M Fedio ◽  
Chitra N Wendakoon ◽  
Ruben Zapata ◽  
Christina Carrillo ◽  
Paul Browning

Abstract The 3M Petrifilm Staph Express Count System was compared with the U.S. Food and Drug Administration's Bacteriological Analytical Manual (BAM) direct-plate count method for the enumeration of Staphylococcus aureus in 6 types of artificially contaminated hard cheese (Asiago, Cheddar, Gruyre, Parmesan, Romano, and Swiss). Five different samples of each cheese type were inoculated with S. aureus (ATCC 25923) to achieve low, medium, and high inoculum levels. S. aureus was enumerated by the Petrifilm and BAM methods, and the results were compared. Multivariate analysis of variance revealed no significant differences (P <0.05) between the 2 methods. The Petrifilm method compared favorably with the BAM procedure. The rapid method was more convenient to use, considerably faster, and less expensive to perform than the BAM method.


2020 ◽  
Vol 2020 ◽  
pp. 1-6
Author(s):  
Annalingam Kirisanth ◽  
M. N. M. Nafas ◽  
Ranga K. Dissanayake ◽  
Jayantha Wijayabandara

Medicinal plants have been the main focus of natural product research. However, recent research has revealed that lower plants including bryophytes are also a major resource of biologically active compounds with novel structures. Sri Lanka is considered as a biodiversity hotspot with a higher degree of endemism flora including bryophytes. In this study, different species of bryophytes were investigated for their antimicrobial and alpha-amylase inhibitory activities. The air-dried plant materials of 6 different bryophyte species, Marchantia sp., Fissidens sp., Plagiochila sp., Sematophyllum demissum, Hypnum cupressiforme, and Calymperes motley, were subjected to sequential cold extraction with 3 different organic solvents. All three types of organic crude extracts were subjected to screening of antimicrobial bioassays using the disc-diffusion method against 3 bacterial strains and 1 fungal strain. According to the results obtained, 6 extracts out of 18 showed antibacterial activity for tested Gram-positive bacteria and 1 active against Gram-negative bacteria. Two extracts showed activity against the pathogenic fungus strain. Extracts from some plants were active against tested bacterial as well as fungal species. TLC-based bioautographic study was carried out to identify the corresponding active bands which is useful for active compound isolation. Furthermore, the ethyl acetate extracts were subjected to evaluate alpha-amylase inhibitory activity where three extracts out of six extracts showed moderate inhibitory activity for alpha-amylase with IC50 ranging 8–30%.


1997 ◽  
Vol 60 (7) ◽  
pp. 858-862 ◽  
Author(s):  
CHIA-MIN LIN ◽  
CHENG-I WEI

Salmonella contamination of precut watermelon, tomatoes, and cantaloupes was responsible for several outbreaks of salmonellosis. To better understand the relationship between bacterial doses and their transfer onto cut surfaces by using a knife, rifampicin-resistant Salmonella montevideo at 7, 70, 700, or 7,000 CFU in Butterfield's buffer (BPB) or tryptic soy broth (TSB) was added to the stem scars of tomatoes. Tomatoes were cut from the stem scar to blossom end using a sterilized knife. After stem scars were aseptically removed, cut surfaces were placed on tryptic soy agar-rifampicin (TSA-RIF) plates or processed by a broth enrichment method to determine if S. montevideo had been transferred to the cut surface. S. montevideo was recovered in a dose-related fashion using both methods. A higher recovery rate was obtained with bacterial inocula in TSB than in BPB, and also with broth enrichment rather than the direct plating method. The distribution of the transferred S. montevideo on the cut surface of contaminated and noncontaminated tomatoes with a knife was related to the inoculum dose added to the stem scars. S. montevideo colonies were found to cluster at the stem scar region with the lower inoculum dose. However, when a higher inoculum dose was used, the colonies spread from the stem scar region to the center and bottom of cut tomatoes, or they were transferred to another uninoculated tomato by the contaminated knife. Therefore, the safety operation criteria recommended by FDA to wash fruits before cutting, to use clean and sanitized utensils and surfaces when preparing cut fruits, and to store the cut fruits below 7°C should be followed in preparing tomato slices to minimize salmonellosis outbreaks caused by this product.


1971 ◽  
Vol 54 (3) ◽  
pp. 732-735
Author(s):  
E F Baer

Abstract The genesis of the present AOAC official first action method for isolation and enumeration of Staphylococcus is reviewed and information is supplied to support recommendations for revision of the method. It is recommended that the present method be revised by deleting instructions for preparation and use of Vogel and Johnson agar and substituting instructions for preparation and use of Baird-Parker medium. It is also recommended that a direct plating method be provided as an alternative method and that the required collaborative study of the alternative method be conducted. The recommendations have been accepted by the Association.


2020 ◽  
Vol 113 (6) ◽  
pp. 2758-2771
Author(s):  
Marc F DiGirolomo ◽  
Isabel A Munck ◽  
Kevin J Dodds ◽  
Jessica Cancelliere

Abstract Oak wilt is slowly expanding in the northeastern United States. Several nitidulid beetle species are known vectors of the fungus [Bretziella fagacearum (Bretz) Z. W. De Beer, Marinc., T. A. Duong, and M. J. Wingf (Microascales: Ceratocystidaceae)] that causes this disease, acquiring spores from fungal mats on infected trees and transmitting them to uninfected trees. Survey and fungal isolation from captured nitidulid beetles could be an important tool for detecting the presence of this disease in a geographic area not previously known to have oak wilt. In preparation for monitoring activities in such areas, two trapping studies were conducted in the northeastern United States: 1) trap test comparing the efficacy of wind-oriented pipe, multiple-funnel, and modified pitfall traps for nitidulids and 2) wet and dry collection cup comparison. Lures were a combination of nitidulid pheromones and fermenting liquid. Results support the use of multiple-funnel traps over the other two trap types, for both targeted species-specific surveys and community sampling. More total nitidulids, Colopterus truncatus (Randall), and Glischrochilus fasciatus (Olivier) were captured in wet collection cups compared with dry cups. Twenty-seven fungal species were isolated, none of which were B. fagacearum. Many fungi isolated from beetles were plant pathogens, indicating that in addition to the oak wilt fungus, sap beetles may contribute to the spread of other plant diseases.


Sign in / Sign up

Export Citation Format

Share Document