scholarly journals To Trade or Not to Trade? Using Bayesian Belief Networks to Assess How to Manage Commercial Wildlife Trade in a Complex World

2021 ◽  
Vol 9 ◽  
Author(s):  
Elizabeth L. Bennett ◽  
Fiona M. Underwood ◽  
E.J. Milner-Gulland
Keyword(s):  
Bayesian Belief Networks ◽  
Wildlife Trade ◽  
Mammal Species ◽  
Management Regimes ◽  
Trade Regimes ◽  
Species Population ◽  
Management Context ◽  
Multiple Species ◽  
Species Specific ◽  
Commercial Trade

International commercial trade in wildlife, whether legal or illegal, is one of the greatest threats to multiple species of wildlife today. Opinions on how to address it are deeply divided across the conservation community. Approaches fall into two broad categories: making the trade illegal to protect against any form of commercial trade or allowing some or all of the trade to be legal and seeking to manage it through sustainable trade. The conservation community is often deeply polarized on which is the better option. We posit that a way to choose between these options is by considering species-specific attributes of biological productivity, management context, and demand. We develop a conceptual framework to assess which option is more likely to result in successful conservation of a species. We show how to construct a Bayesian Belief Network (BBN) to model how these attributes (1) interact to affect the sustainability of the species’ population and (2) vary under different trade management regimes. This approach can support scientifically based decision-making, by predicting the likely sustainability outcome for a population of a species under different trade management regimes, given its particular characteristics and context. The BBN allows identification of key points at which conservation interventions could change the potential outcome. It also provides the opportunity to explore how different assumptions about how humans might respond to different trade regimes affects outcomes. We illustrate these ideas by using the BBN for a hypothetical terrestrial mammal species population and discuss how the BBN can be extended for species with different characteristics, for example, those that can be stockpiled or when there are multiple products. This approach has the potential to help the conservation community to assess the most appropriate regime for managing wildlife trade in a transparent, open, and scientifically based way.

scholarly journals Multiple species‐specific molecular markers using nanofluidic array as a tool to detect prey DNA from carnivore scats

2021 ◽  
Author(s):  
Cecilia Di Bernardi ◽  
Camilla Wikenros ◽  
Eva Hedmark ◽  
Luigi Boitani ◽  
Paolo Ciucci ◽  
...  
Keyword(s):  
Molecular Markers ◽  
Multiple Species ◽  
Species Specific

scholarly journals Interacting effects of insect and ungulate herbivory on Scots pine growth

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Michelle Nordkvist ◽  
Maartje J. Klapwijk ◽  
La rs Edenius ◽  
Christer Björkman
Keyword(s):  
Plant Growth ◽  
Scots Pine ◽  
Growth Response ◽  
Insect Herbivory ◽  
Additive Effects ◽  
Significant Interaction Effect ◽  
Ungulate Herbivory ◽  
Pine Trees ◽  
Multiple Species ◽  
Species Specific

AbstractMost plants are subjected to damage from multiple species of herbivores, and the combined impact on plant growth can be non-additive. Since plant response to herbivores tends to be species specific, and change with repeated damage, the outcome likely depend on the sequence and number of attacks. There is a high likelihood of non-additive effects on plant growth by damage from mammals and insects, as mammalian herbivory can alter insect herbivore damage levels, yet few studies have explored this. We report the growth response of young Scots pine trees to sequential mammal and insect herbivory, varying the sequence and number of damage events, using an ungulate-pine-sawfly system. Combined sawfly and ungulate herbivory had both additive and non-additive effects on pine growth—the growth response depended on the combination of ungulate browsing and sawfly defoliation (significant interaction effect). Repeated sawfly herbivory reduced growth (compared to single defoliation) on un-browsed trees. However, on browsed trees, depending on when sawfly defoliation was combined with browsing, trees exposed to repeated sawfly herbivory had both higher, lower and the same growth as trees exposed to a single defoliation event. We conclude that the sequence of attacks by multiple herbivores determine plant growth response.

scholarly journals Bark traits, decomposition and flammability of Australian forest trees

2017 ◽  
Vol 65 (4) ◽  
pp. 327 ◽  
Author(s):  
Saskia Grootemaat ◽  
Ian J. Wright ◽  
Peter M. van Bodegom ◽  
Johannes H. C. Cornelissen ◽  
Veronica Shaw
Keyword(s):  
Forest Tree ◽  
Remarkable Feature ◽  
Interspecific Differences ◽  
Eucalypt Plantations ◽  
Physical Traits ◽  
Key Driver ◽  
Multiple Species ◽  
Species Specific ◽  
First Time ◽  
Different Tissues

Bark shedding is a remarkable feature of Australian trees, yet relatively little is known about interspecific differences in bark decomposability and flammability, or what chemical or physical traits drive variation in these properties. We measured the decomposition rate and flammability (ignitibility, sustainability and combustibility) of bark from 10 common forest tree species, and quantified correlations with potentially important traits. We compared our findings to those for leaf litter, asking whether the same traits drive flammability and decomposition in different tissues, and whether process rates are correlated across tissue types. Considerable variation in bark decomposability and flammability was found both within and across species. Bark decomposed more slowly than leaves, but in both tissues lignin concentration was a key driver. Bark took longer to ignite than leaves, and had longer mass-specific flame durations. Variation in flammability parameters was driven by different traits in the different tissues. Decomposability and flammability were each unrelated, when comparing between the different tissue types. For example, species with fast-decomposing leaves did not necessarily have fast-decomposing bark. For the first time, we show how patterns of variation in decomposability and flammability of bark diverge across multiple species. By taking species-specific bark traits into consideration there is potential to make better estimates of wildfire risks and carbon loss dynamics. This can lead to better informed management decisions for Australian forests, and eucalypt plantations, worldwide.

Response of wildlife to forest herbicide applications in northern coniferous ecosystems

1993 ◽  
Vol 23 (10) ◽  
pp. 2286-2299 ◽  
Author(s):  
R.A. Lautenschlager
Keyword(s):  
Small Mammal ◽  
Growing Season ◽  
Sampling Techniques ◽  
Mammal Species ◽  
Growing Seasons ◽  
Disturbed Areas ◽  
Herbicide Treatments ◽  
Species Specific ◽  
Small Mammal Species ◽  
Coniferous Ecosystems

Reviewed studies of the effects of forest herbicide applications on wildlife often lacked replication, pretreatment information, and (or) were conducted for only one or two growing seasons after treatment. Because of these problems, as well as the use of dissimilar sampling techniques, study conclusions have sometimes been contradictory. A review of eight studies of the effects of herbicide treatments on northern songbird populations in regenerating clearcuts indicates that total songbird populations are seldom reduced during the growing season after treatment. Densities of species that use early successional brushy, deciduous cover are sometimes reduced, while densities of species which commonly use more open areas, sometimes increase. A review of 14 studies of the effects of herbicide treatments on small mammals indicates that like songbirds, small mammal responses are species specific. Some species are unaffected, while some select and others avoid herbicide-treated areas. Only studies that use kill or removal trapping to study small mammal responses show density reductions associated with herbicide treatment. It seems that some small mammal species may be reluctant to venture into disturbed areas, although residents in those areas are apparently not affected by the disturbance. Fourteen relevant studies examined the effects of conifer release treatments on moose and deer foods and habitat use. Conifer release treatments reduce the availability of moose browse for as long as four growing seasons after treatment. The degree of reduction during the growing season after treatment varies with the herbicide and rate used. Deer use of treated areas remains unchanged or increases during the first growing season after treatment. Eight years after treating a naturally regenerated spruce–fir stand browse was three to seven times more abundant on treated than on control plots (depending on the chemical and rate used). Forage quality (nitrogen, ash, and moisture) of crop trees increased one growing season after the soil-active herbicide simazine was applied to control competition around outplanted 3-year-old balsam fir seedlings.

scholarly journals Genome-wide markers reveal differentiation between and within the cryptic sister species, sunset and vermilion rockfish

2021 ◽  
Author(s):  
Gary C. Longo ◽  
John Harms ◽  
John R. Hyde ◽  
Matthew T. Craig ◽  
Ana Ramón-Laca ◽  
...  
Keyword(s):  
Management Strategies ◽  
Cost Effective ◽  
Sister Species ◽  
Nucleotide Polymorphisms ◽  
Relative Contribution ◽  
Genetic Groups ◽  
Cost Effective Method ◽  
Species Population ◽  
Single Complex ◽  
Species Specific

AbstractThe vermilion rockfish complex, which consists of the cryptic sister species vermilion and sunset rockfish, is one of the most valuable recreational fisheries on the U.S. West Coast. These species are currently managed as a single complex, and because of uncertainty surrounding the relative contribution of each species within existing data sources, the stock status of each species is not fully known. A reliable and cost-effective method is needed to disentangle these species that will allow for the development of abundance indices, life history profiles, and catch histories that may potentially support species-specific stock assessments. Using restriction-site associated DNA sequence (RADseq) markers we generated 10,003 polymorphic loci to characterize the vermilion rockfish complex. PCA and Bayesian clustering approaches based on these loci clearly distinguished between sunset and vermilion rockfishes and identified hybrid individuals. These loci included 203 highly differentiated (FST ≥ 0.99) single nucleotide polymorphisms, which we consider candidates in the planned development of a diagnostic assay capable of distinguishing between these cryptic species. In addition to clearly delineating to species, subsets of the interspecific markers allowed for insight into intraspecific differentiation in both species. Population genetic analyses for sunset rockfish identified two weakly divergent genetic groups with similar levels of genetic diversity. Vermilion rockfish, however, were characterized by three distinct genetic groups with much stronger signals of differentiation and significantly different genetic diversities. Collectively, these data will contribute to well-informed, species-specific management strategies to protect this valuable species complex.

scholarly journals Why and how might genetic and phylogenetic diversity be reflected in the identification of key biodiversity areas?

2015 ◽  
Vol 370 (1662) ◽  
pp. 20140019 ◽  
Author(s):  
T. M. Brooks ◽  
A. Cuttelod ◽  
D. P. Faith ◽  
J. Garcia-Moreno ◽  
P. Langhammer ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Threatened Species ◽  
Phylogenetic Diversity ◽  
Species Population ◽  
Threatened Taxa ◽  
Conservation Actions ◽  
Ecosystem Diversity ◽  
Species Specific ◽  
A Site ◽  
Specific Conservation

‘Key biodiversity areas' are defined as sites contributing significantly to the global persistence of biodiversity. The identification of these sites builds from existing approaches based on measures of species and ecosystem diversity and process. Here, we therefore build from the work of Sgró et al. (2011 Evol. Appl. 4 , 326–337. ( doi:10.1111/j.1752-4571.2010.00157.x )) to extend a framework for how components of genetic diversity might be considered in the identification of key biodiversity areas. We make three recommendations to inform the ongoing process of consolidating a key biodiversity areas standard: (i) thresholds for the threatened species criterion currently consider a site's share of a threatened species' population; expand these to include the proportion of the species' genetic diversity unique to a site; (ii) expand criterion for ‘threatened species' to consider ‘threatened taxa’ and (iii) expand the centre of endemism criterion to identify as key biodiversity areas those sites holding a threshold proportion of the compositional or phylogenetic diversity of species (within a taxonomic group) whose restricted ranges collectively define a centre of endemism. We also recommend consideration of occurrence of EDGE species (i.e. threatened phylogenetic diversity) in key biodiversity areas to prioritize species-specific conservation actions among sites.

scholarly journals Long-Distance Movement of mRNAs in Plants

Plants ◽  
2020 ◽  
Vol 9 (6) ◽  
pp. 731 ◽  
Author(s):  
Chao Xia ◽  
Cankui Zhang
Keyword(s):  
Vascular System ◽  
Physiological Characteristic ◽  
Small Peptides ◽  
Long Distance ◽  
Systemic Signaling ◽  
Long Distance Transport ◽  
Specific Mrnas ◽  
Multiple Species ◽  
Species Specific ◽  
Long Distance Movement

Long-distance transport of information molecules in the vascular tissues could play an important role in regulating plant growth and enabling plants to cope with adverse environments. Various molecules, including hormones, proteins, small peptides and small RNAs have been detected in the vascular system and proved to have systemic signaling functions. Sporadic studies have shown that a number of mRNAs produced in the mature leaves leave their origin cells and move to distal tissues to exert important physiological functions. In the last 3–5 years, multiple heterograft systems have been developed to demonstrate that a large quantity of mRNAs are mobile in plants. Further comparison of the mobile mRNAs identified from these systems showed that the identities of these mRNAs are very diverse. Although species-specific mRNAs may regulate the unique physiological characteristic of the plant, mRNAs with conserved functions across multiple species are worth more effort in identifying universal physiological mechanisms existing in the plant kingdom.

scholarly journals Restoration Scaling Approaches to Addressing Ecological Injury: The Habitat-Based Resource Equivalency Method

2020 ◽  
Vol 65 (2) ◽  
pp. 161-177 ◽  
Author(s):  
Mary Baker ◽  
Adam Domanski ◽  
Terill Hollweg ◽  
Jason Murray ◽  
Diana Lane ◽  
...  
Keyword(s):  
Natural Resource ◽  
Oil Spills ◽  
Error Rates ◽  
Hazardous Substances ◽  
Habitat Equivalency Analysis ◽  
Natural Resource Damage Assessment ◽  
As Species ◽  
Ecological Habitat ◽  
Multiple Species ◽  
Species Specific

AbstractNatural resource trustee agencies must determine how much, and what type of environmental restoration will compensate for injuries to natural resources that result from releases of hazardous substances or oil spills. To fulfill this need, trustees, and other natural resource damage assessment (NRDA) practitioners have relied on a variety of approaches, including habitat equivalency analysis (HEA) and resource equivalency analysis (REA). The purpose of this paper is to introduce the Habitat-Based Resource Equivalency Method (HaBREM), which integrates REA’s reproducible injury metrics and population modeling with HEA’s comprehensive habitat approach to restoration. HaBREM is intended to evaluate injury and restoration using organisms that use the habitat to represent ecological habitat functions. This paper seeks to expand and refine the use of organism-based metrics (biomass-based REA), providing an opportunity to integrate sublethal injuries to multiple species, as well as the potential to include error rates for injury and restoration parameters. Applied by NRDA practitioners in the appropriate context, this methodology can establish the relationship between benefits of compensatory restoration projects and injuries to plant or animal species within an affected habitat. HaBREM may be most effective where there are appropriate data supporting the linkage between habitat and species gains (particularly regionally specific habitat information), as well as species-specific monitoring data and predictions on the growth, density, productivity (i.e., rate of generation of biomass or individuals), and age distributions of indicator species.

scholarly journals A framework to bridge scales in distribution modeling of soil microbiota

2020 ◽  
Vol 96 (5) ◽  
Author(s):  
Jonas J Lembrechts ◽  
L Broeders ◽  
J De Gruyter ◽  
D Radujković ◽  
I Ramirez-Rojas ◽  
...  
Keyword(s):  
Environmental Gradients ◽  
Spatial Scales ◽  
Biotic Interactions ◽  
Environmental Niche ◽  
Distribution Models ◽  
Soil Microbiota ◽  
Soil Microbial ◽  
Critical Issues ◽  
Multiple Species ◽  
Species Specific

ABSTRACT Creating accurate habitat suitability and distribution models (HSDMs) for soil microbiota is far more challenging than for aboveground organism groups. In this perspective paper, we propose a conceptual framework that addresses several of the critical issues holding back further applications. Most importantly, we tackle the mismatch between the broadscale, long-term averages of environmental variables traditionally used, and the environment as experienced by soil microbiota themselves. We suggest using nested sampling designs across environmental gradients and objectively integrating spatially hierarchic heterogeneity as covariates in HSDMs. Second, to incorporate the crucial role of taxa co-occurrence as driver of soil microbial distributions, we promote the use of joint species distribution models, a class of models that jointly analyze multiple species’ distributions, quantifying both species-specific environmental responses (i.e. the environmental niche) and covariance among species (i.e. biotic interactions). Our approach allows incorporating the environmental niche and its associated distribution across multiple spatial scales. The proposed framework facilitates the inclusion of the true relationships between soil organisms and their abiotic and biotic environments in distribution models, which is crucial to improve predictions of soil microbial redistributions as a result of global change.

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