scholarly journals Transfection of Arctic Bryum sp. KMR5045 as a Model for Genetic Engineering of Cold-Tolerant Mosses

2021 ◽  
Vol 11 ◽  
Author(s):  
Mi Young Byun ◽  
Suyeon Seo ◽  
Jungeun Lee ◽  
Yo-Han Yoo ◽  
Hyoungseok Lee
Keyword(s):  
Molecular Mechanisms ◽  
Extreme Environments ◽  
Temperature Tolerance ◽  
Plant Evolution ◽  
Basic Knowledge ◽  
The Arctic ◽  
Terrestrial Plants ◽  
Moss Species ◽  
Metabolic Characteristics ◽  
Low Temperature Tolerance

Mosses number about 13,000 species and are an important resource for the study of the plant evolution that occurred during terrestrial colonization by plants. Recently, the physiological and metabolic characteristics that distinguish mosses from terrestrial plants have received attention. In the Arctic, in particular, mosses developed their own distinct physiological features to adapt to the harsh environment. However, little is known about the molecular mechanisms by which Arctic mosses survive in extreme environments due to the lack of basic knowledge and tools such as genome sequences and genetic transfection methods. In this study, we report the axenic cultivation and transfection of Arctic Bryum sp. KMR5045, as a model for bioengineering of Arctic mosses. We also found that the inherent low-temperature tolerance of KMR5045 permitted it to maintain slow growth even at 2°C, while the model moss species Physcomitrium patens failed to grow at all, implying that KMR5045 is suitable for studies of cold-tolerance mechanisms. To achieve genetic transfection of KMR5045, some steps of the existing protocol for P. patens were modified. First, protoplasts were isolated using 1% driselase solution. Second, the appropriate antibiotic was identified and its concentration was optimized for the selection of transfectants. Third, the cell regeneration period before transfer to selection medium was extended to 9 days. As a result, KMR5045 transfectants were successfully obtained and confirmed transfection by detection of intracellular Citrine fluorescence derived from expression of a pAct5:Citrine transgene construct. This is the first report regarding the establishment of a genetic transfection method for an Arctic moss species belonging to the Bryaceae. The results of this study will contribute to understanding the function of genes involved in environmental adaptation and to application for production of useful metabolites derived from stress-tolerant mosses.

Late-Holocene subtropical mangrove dynamics in response to climate change during the last millennium

The Holocene ◽  
2018 ◽  
Vol 29 (3) ◽  
pp. 445-456 ◽  
Author(s):  
Marlon C França ◽  
Luiz CR Pessenda ◽  
Marcelo CL Cohen ◽  
Allana Q de Azevedo ◽  
Neuza A Fontes ◽  
...  
Keyword(s):  
Climate Change ◽  
Organic Matter ◽  
Tidal Flat ◽  
Late Holocene ◽  
C:N Ratio ◽  
Sedimentary Facies ◽  
Temperature Tolerance ◽  
Terrestrial Plants ◽  
The Past ◽  
Low Temperature Tolerance

This work aims to study the impacts of climate change in the subtropical mangroves during the late-Holocene on a southern Brazilian coastal plain and discuss the environmental conditions to the mangrove establishment near the austral limit of South America mangroves. Samples were collected to study palynological groups, sedimentary facies, and geochemistry analyses (δ13C, δ15N, TOC, TN, C:N ratio, TS, and C:S ratio), synchronized with four radiocarbon ages. The main result of this research was the mangrove succession, divided into three palynological zones composing two facies association: (1) herbaceous tidal flat and (2) mangrove tidal flat. The first zone between at least ~1815 and ~1629 cal. yr BP was marked by the mangrove absence with marine particulate organic carbon, C3 terrestrial plants, and macrophytes organic matter influence with δ13C values between −26.7‰ and −20‰, δ15N values x̅ = 3.5‰ and C:N around 21.8. The second zone between ~1629 and ~853 cal. yr BP was marked by the mangrove establishment represented only by Laguncularia pollen under influence of estuarine organic matter (δ13C x̅ = −26.5‰; δ15N x̅ = 3.2‰, and C:N around 16.4). The third zone reveals an increase of Laguncularia and presence of Avicennia pollen since ~853 cal. yr BP. Near the surface (<10 cm) occurs Rhizophora pollen, indicating the establishment of this genus during the past decades, under the modern environmental condition (δ13C x̅ = −27.02‰; δ15N x̅ = 3.12‰, and C:N around 17.42). This mangrove vertical succession may be associated with the low-temperature tolerance, where the sequence Rhizophora, Avicennia, and Laguncularia occurs from the northern to the southern limits of Santa Catarina coast, respectively, reflecting the temperature gradient. Therefore, probably, the establishment of the mangrove assemblage identified along the studied pollen profile was influenced by a temperature increase of air and water during the late-Holocene and, considering the Rhizophora genus, only during the past decades.

scholarly journals Harnessing the Genetic Diversity and Metabolic Potential of Extremophilic Microorganisms through the Integration of Metagenomics and Single-Cell Genomics

2020 ◽  
Author(s):  
Deepika Goyal ◽  
Shiv Swaroop ◽  
Janmejay Pandey
Keyword(s):  
Microbial Diversity ◽  
Single Cell ◽  
Molecular Mechanisms ◽  
Extreme Environments ◽  
Metabolic Potential ◽  
Single Cell Genomics ◽  
Metabolic Characteristics ◽  
Culture Independent ◽  
Synergistic Approach

Microorganisms thriving under extreme environments have proven to be an invaluable resource for metabolic products and processes. While studies carried out on microbial characterization of extremophilic environments during golden era of microbiology adapted a ‘reductionist approach’ and focused on isolation, purification and characterization of individual microbial isolates; the recent studies have implemented a holistic approach using both culture-dependent and culture-independent approaches for characterization of total microbial diversity of the extreme environments. Findings from these studies have unmistakably indicated that microbial diversity within extreme environments is much higher than anticipated. Consequently, unraveling the taxonomic and metabolic characteristics of microbial diversity in extreme environments has emerged as an imposing challenge in the field of microbiology and microbial biotechnology. To a great extent, this challenge has been addressed with inception and advancement of next-generation sequencing and computing methods for NGS data analyses. However, further it has been realized that in order to maximize the exploitation of genetic and metabolic diversity of extremophilic microbial diversity, the metagenomic approaches must be combined synergistically with single-cell genomics. A synergistic approach is expected to provide comprehensions into the biology of extremophilic microorganism, including their metabolic potential, molecular mechanisms of adaptations, unique genomic features including codon reassignments etc.

scholarly journals OsmiR528 Enhances Cold Stress Tolerance by Repressing Expression of Stress Response-related Transcription Factor Genes in Plant Cells

2019 ◽  
Vol 20 (2) ◽  
pp. 100-114 ◽  
Author(s):  
Wei Tang ◽  
Wells A. Thompson
Keyword(s):  
Transcription Factor ◽  
Stress Response ◽  
Low Temperature ◽  
Cold Stress ◽  
Stress Tolerance ◽  
Molecular Mechanisms ◽  
Plant Cells ◽  
Temperature Tolerance ◽  
Low Temperature Tolerance ◽  
Related Transcription Factor

Background: MicroRNAs participate in many molecular mechanisms and signaling transduction pathways that are associated with plant stress tolerance by repressing expression of their target genes. However, how microRNAs enhance tolerance to low temperature stress in plant cells remains elusive. Objective: In this investigation, we demonstrated that overexpression of the rice microRNA528 (OsmiR528) increases cell viability, growth rate, antioxidants content, ascorbate peroxidase (APOX) activity, and superoxide dismutase (SOD) activity and decreases ion leakage rate and thiobarbituric acid reactive substances (TBARS) under low temperature stress in Arabidopsis (Arabidopsis thaliana), pine (Pinus elliottii), and rice (Oryza sativa). Methods: To investigate the potential mechanism of OsmiR528 in increasing cold stress tolerance, we examined expression of stress-associated MYB transcription factors OsGAMYB-like1, OsMYBS3, OsMYB4, OsMYB3R-2, OsMYB5, OsMYB59, OsMYB30, OsMYB1R, and OsMYB20 in rice cells by qRT-PCR. Results: Our experiments demonstrated that OsmiR528 decreases expression of transcription factor OsMYB30 by targeting a F-box domain containing protein gene (Os06g06050), which is a positive regulator of OsMYB30. In OsmiR528 transgenic rice, reduced OsMYB30 expression results in increased expression of BMY genes OsBMY2, OsBMY6, and OsBMY10. The transcript levels of the OsBMY2, OsBMY6, and OsBMY10 were elevated by OsMYB30 knockdown, but decreased by Os- MYB30 overexpression in OsmiR528 transgenic cell lines, suggesting that OsmiR528 increases low temperature tolerance by modulating expression of stress response-related transcription factor. Conclusion: Our experiments provide novel information in increasing our understanding in molecular mechanisms of microRNAs-associated low temperature tolerance and are valuable in plant molecular breeding from monocotyledonous, dicotyledonous, and gymnosperm plants.

Bioinspired strengthening and toughening carbon nanotube@polyaniline/graphene film using electroactive biomass as glue for high rate, volumetric capacitance and low-temperature tolerance flexible supercapacitor

2021 ◽  
Author(s):  
Dan Wu ◽  
Chuying Yu ◽  
Wenbin Zhong
Keyword(s):  
Carbon Nanotube ◽  
High Performance ◽  
Graphene Film ◽  
Temperature Tolerance ◽  
High Rate ◽  
Flexible Supercapacitor ◽  
Low Temperature Tolerance ◽  
Electrical Devices ◽  
Brick And Mortar ◽  
Volumetric Capacitance

Natural nacre built up with brick-and-mortar architecture, exhibiting extraordinary strength and toughness, provides an inspiration to construct high-performance multifunctional film for flexible energy storage and portable electrical devices. In the...

scholarly journals Plant evolution driven by interactions with symbiotic and pathogenic microbes

Science ◽  
2021 ◽  
Vol 371 (6531) ◽  
pp. eaba6605 ◽  
Author(s):  
Pierre-Marc Delaux ◽  
Sebastian Schornack
Keyword(s):  
Cell Biology ◽  
Genetic Basis ◽  
Reverse Genetics ◽  
Molecular Mechanisms ◽  
Plant Evolution ◽  
Symbiotic Microorganisms ◽  
Protection Mechanisms ◽  
Evolutionary Trajectories ◽  
Microbe Interactions ◽  
Pathogenic Microbes

During 450 million years of diversification on land, plants and microbes have evolved together. This is reflected in today’s continuum of associations, ranging from parasitism to mutualism. Through phylogenetics, cell biology, and reverse genetics extending beyond flowering plants into bryophytes, scientists have started to unravel the genetic basis and evolutionary trajectories of plant-microbe associations. Protection against pathogens and support of beneficial, symbiotic, microorganisms are sustained by a blend of conserved and clade-specific plant mechanisms evolving at different speeds. We propose that symbiosis consistently emerges from the co-option of protection mechanisms and general cell biology principles. Exploring and harnessing the diversity of molecular mechanisms used in nonflowering plant-microbe interactions may extend the possibilities for engineering symbiosis-competent and pathogen-resilient crops.

scholarly journals Desiccation Tolerance as the Basis of Long-Term Seed Viability

2020 ◽  
Vol 22 (1) ◽  
pp. 101
Author(s):  
Galina Smolikova ◽  
Tatiana Leonova ◽  
Natalia Vashurina ◽  
Andrej Frolov ◽  
Sergei Medvedev
Keyword(s):  
Desiccation Tolerance ◽  
Vascular Plants ◽  
Molecular Mechanisms ◽  
Regulation Of Gene Expression ◽  
Seed Viability ◽  
Late Embryogenesis Abundant ◽  
Maturation Stage ◽  
Terrestrial Plants ◽  
Complex Anatomy ◽  
Orthodox Seeds

Desiccation tolerance appeared as the key adaptation feature of photoautotrophic organisms for survival in terrestrial habitats. During the further evolution, vascular plants developed complex anatomy structures and molecular mechanisms to maintain the hydrated state of cell environment and sustain dehydration. However, the role of the genes encoding the mechanisms behind this adaptive feature of terrestrial plants changed with their evolution. Thus, in higher vascular plants it is restricted to protection of spores, seeds and pollen from dehydration, whereas the mature vegetative stages became sensitive to desiccation. During maturation, orthodox seeds lose up to 95% of water and successfully enter dormancy. This feature allows seeds maintaining their viability even under strongly fluctuating environmental conditions. The mechanisms behind the desiccation tolerance are activated at the late seed maturation stage and are associated with the accumulation of late embryogenesis abundant (LEA) proteins, small heat shock proteins (sHSP), non-reducing oligosaccharides, and antioxidants of different chemical nature. The main regulators of maturation and desiccation tolerance are abscisic acid and protein DOG1, which control the network of transcription factors, represented by LEC1, LEC2, FUS3, ABI3, ABI5, AGL67, PLATZ1, PLATZ2. This network is complemented by epigenetic regulation of gene expression via methylation of DNA, post-translational modifications of histones and chromatin remodeling. These fine regulatory mechanisms allow orthodox seeds maintaining desiccation tolerance during the whole period of germination up to the stage of radicle protrusion. This time point, in which seeds lose desiccation tolerance, is critical for the whole process of seed development.

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