scholarly journals Mass Selection for Reduced Deoxynivalenol Concentration Using an Optical Sorter in SRW Wheat

Agronomy ◽  
2019 ◽  
Vol 9 (12) ◽  
pp. 816 ◽  
Author(s):  
W. Jesse Carmack ◽  
Anthony J. Clark ◽  
Yanhong Dong ◽  
David A. Van Sanford
Keyword(s):  
Resistance Breeding ◽  
Field Evaluation ◽  
Triticum Aestivum L ◽  
Breeding Strategy ◽  
Mass Selection ◽  
Head Blight ◽  
Breeding Lines ◽  
Line Selection ◽  
Fhb Resistance ◽  
Primary Measure

Fusarium head blight (FHB) of wheat (Triticum aestivum L.) results in discolored Fusarium damaged kernels (FDK) contaminated with deoxynivalenol (DON). DON accumulation, a primary measure of FHB resistance, can be used as a basis for selection, but testing each genotype in several genetically variable populations is expensive and time-consuming. Therefore, FHB resistance breeding decisions are routinely based on in-field phenotypic evaluation. However, using an optical sorter as an alternative to in-field evaluation, mass selection (MS) for FHB resistance can be quickly performed post-harvest. The objective of this study was to utilize an optical seed sorter to select breeding lines with enhanced FHB resistance (lower DON and FDK values). Three hundred F4 derived breeding lines were grown in an inoculated disease nursery over several years in Lexington, KY. Grain from each breeding line was sorted using an optical seed sorter calibrated to reject scabby (discolored) seed. The accepted (non-scabby) seed was used to plant subsequent generations. DON and kernel damage traits were lowered each cycle of line selection with the optical sorter. Our findings suggest that optically sorting grain may be an effective breeding strategy for lowering DON accumulation and limiting kernel damage associated with FHB.

Determining The Effect of Mass Selection for FHB Resistance in Soft Red Winter Wheat Using an Image-Based Optical Sorter

2019 ◽  
Vol 9 (2) ◽  
pp. 278-296
Author(s):  
Hussein M. Khaeim ◽  
Anthony Clark ◽  
Tom Pearson ◽  
Dr. David Van Sanford
Keyword(s):  
Resistance Breeding ◽  
Phenotypic Selection ◽  
Triticum Aestivum L ◽  
Gibberella Zeae ◽  
Scab Resistance ◽  
Mass Selection ◽  
Conidial Suspension ◽  
Head Blight ◽  
Soft Red Winter Wheat ◽  
Selection For

Fusarium head blight (FHB) or head scab, caused by Fusarium graminearum Schwabe [telomorph: Gibberella zeae Schwein.(Petch)], is one of the most destructive diseases of wheat (Triticum aestivum L.) worldwide. Numerous strategies for scab resistance breeding are in use, including phenotypic selection for low severity and marker-assisted selection for resistance QTL. The most destructive consequences of scab are evidenced through a reduction in grain quality, and the presence of mycotoxins, the most common of which is deoxynivalenol (DON). Thus, there is great interest among breeders in selecting for resistance to both of these traits. To this end, a study was devised as follows. In 2010, 20 bulk F3 SRW wheat populations with scab resistant parents in their pedigrees were harvested by population from unreplicated plots near Lexington, KY. The plots were affected by a naturally occurring mild-moderate scab epidemic. The grain was sorted on a USDA/ARS and National Manufacturing Seed Sorter System with color camera according to a calibration that reflected visual differences between asymptomatic grain and grain showing FHB symptoms. This process was repeated in 2011 using grain from plots that had conidial suspension applied at anthesis. In 2012, an unreplicated plot study of the C0, C1 and C2 cycles of selection, inoculated with grain spawn and conidial suspension, was evaluated for Fusarium damaged kernels (FDK) and DON concentration. An additional cycle of selection was conducted by running the bulk grain through the sorter. In October 2012, 4 selection cycles of the 20 populations were planted in a RCB experiment at Lexington and Princeton, KY. Bulk populations were planted in both scab nursery and plots, and C3 accepted and rejected of all populations and derived lines of 2 populations were planted in the scab nursery in Lexington, KY. Some populations had FDK and DON reduction with selection, and some derived lines had either numerical or significant reduction with selection. Although the accepted fraction had non-significant reduction compared with the rejected fraction over the populations, FDK and DON means were obviously lower in accepted than in rejected fractions.

scholarly journals Alien chromatin but not Fhb7 confers Fusarium head blight resistance in wheat breeding

2021 ◽  
Author(s):  
Xianrui Guo ◽  
Qinghua Shi ◽  
Jing Yuan ◽  
Mian Wang ◽  
Jing Wang ◽  
...  
Keyword(s):  
Fusarium Head Blight ◽  
Fusarium Head Blight Resistance ◽  
Resistance Breeding ◽  
Wheat Breeding ◽  
Glutathione S Transferase ◽  
Head Blight ◽  
Fhb Resistance ◽  
Translocation Lines ◽  
High Level ◽  
Thinopyrum Elongatum

AbstractFusarium head blight (FHB), caused by Fusarium species, seriously threaten global wheat production. Three wheat-Th.elongatum FHB resistant translocation lines have been developed and used for breeding. Transcriptomic analysis identified a derivative glutathione S-transferase transcript T26102, which was homologous to Fhb7 and induced dramatically by Fusarium graminearum. Homologs of Fhb7 were detected in several genera in Triticeae, including Thinopyrum, Elymus, Leymus, Pseudoroegeria and Roegeria. Several wheat-Thinopyrum translocation lines carrying Fhb7 remain susceptible to FHB, and transgenic plants overexpressing the T26102 on different backgrounds did not improve the FHB resistance. Taken as a whole, we show the application of the chromatin derived from diploid Thinopyrum elongatum successfully conferring wheat with high level FHB resistance independent of the Fhb7.One Sentence SummaryThinopyrum elongatum chromatin from 7EL was successfully applied to wheat FHB resistance breeding, but the resistant gene other than the reported Fhb7 remained unknown.

scholarly journals Epigenetic regulation of gene expression improves Fusarium head blight resistance in durum wheat

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Jitendra Kumar ◽  
Krishan M. Rai ◽  
Seyedmostafa Pirseyedi ◽  
Elias M. Elias ◽  
Steven Xu ◽  
...  
Keyword(s):  
Fusarium Head Blight ◽  
Regulation Of Gene Expression ◽  
Fusarium Head Blight Resistance ◽  
Mapk Signaling ◽  
Head Blight ◽  
Breeding Lines ◽  
Significant Difference ◽  
Plant Pathogen Interaction ◽  
Fhb Resistance ◽  
Parental Lines

Abstract Eight advanced durum-breeding lines were treated with 5-methyl-azacytidine to test the feasibility of generating sources of Fusarium head blight (FHB) resistance. Of the 800 treated seeds, 415 germinated and were advanced up to four (M4) generations by selfing. Thirty-two of the resulting 415 M4 lines were selected following preliminary screening and were further tested for FHB resistance for three years at two field locations, and in the greenhouse. Five of the 32 M4 lines showed less than 30% disease severity, as compared to the parental lines and susceptible checks. Fusarium-damaged kernels and deoxynivalenol analyses supported the findings of the field and greenhouse disease assessments. Two of the most resistant M4 lines were crossed to a susceptible parent, advanced to third generation (BC1:F3) and were tested for stability and inheritance of the resistance. About, one third of the BC1:F3 lines showed FHB resistance similar to their M4 parents. The overall methylation levels (%) were compared using FASTmC method, which did not show a significant difference between M4 and parental lines. However, transcriptome analysis of one M4 line revealed significant number of differentially expressed genes related to biosynthesis of secondary metabolites, MAPK signaling, photosynthesis, starch and sucrose metabolism, plant hormone signal transduction and plant-pathogen interaction pathways, which may have helped in improved FHB resistance.

scholarly journals Evaluation of Canadian barley breeding lines for Fusarium head blight resistance

2015 ◽  
Vol 95 (5) ◽  
pp. 923-929 ◽  
Author(s):  
Xinyao He ◽  
Mohamed Osman ◽  
James Helm ◽  
Flavio Capettini ◽  
Pawan K. Singh
Keyword(s):  
Fusarium Head Blight ◽  
Fusarium Head Blight Resistance ◽  
Correlation Coefficients ◽  
Blight Resistance ◽  
Head Blight ◽  
Breeding Programs ◽  
Breeding Lines ◽  
Barley Breeding ◽  
Days To Heading ◽  
Fhb Resistance

He, X., Osman, M., Helm, J., Capettini, F. and Singh, P. K. 2015. Evaluation of Canadian barley breeding lines for Fusarium head blight resistance. Can. J. Plant Sci. 95: 923–929. Fusarium head blight (FHB) is a major challenge to the successful production of barley in Canada, as well as for end-users such as the malting and brewing industries. Due to the quantitative inheritance of FHB resistance, continuous effort is required to identify breeding lines with improved FHB resistance and incorporate them into crossing schemes to enhance FHB resistance. In the present study, 402 advanced breeding lines from Alberta, Canada, were evaluated in the FHB screening nursery at CIMMYT, Mexico. In 2011 and 2012, FHB incidence was measured on a scale of 1 to 4 to eliminate the most susceptible lines. In 2013 and 2014, 181 lines with the lowest disease scores in the previous 2 yr were tested in replicated experiments for field FHB index, Fusarium-damaged kernels, and deoxynivalenol content. Agronomic and morphological traits, specifically days to heading, plant height, and row and hull types were also evaluated in relations to FHB parameters. Correlation coefficients among the three FHB parameters in both 2013 and 2014 were all significant at P<0.0001, ranging from 0.36 to 0.63. Additional correlation analysis showed that late-maturing, tall, and two-row lines tended to have lower disease, whereas hull type did not show a significant correlation with FHB. Several lines with high and stable FHB resistance similar to that of the resistant checks were identified. These could be used in breeding programs as resistance sources or be registered as new cultivars if their overall attributes meet commercial standards.

scholarly journals Genome-wide association mapping revealed syntenic loci QFhb-4AL and QFhb-5DL for Fusarium head blight resistance in common wheat (Triticum aestivum L.)

2019 ◽  
Author(s):  
Wenjing Hu ◽  
Derong Gao ◽  
Hongya Wu ◽  
Jian Liu ◽  
Chunmei Zhang ◽  
...  
Keyword(s):  
Genome Wide Association Study ◽  
Resistance Breeding ◽  
Snp Markers ◽  
Genome Wide Association ◽  
Type Ii ◽  
Head Blight ◽  
Genome Wide ◽  
A Genome ◽  
Fhb Resistance ◽  
Type Ii Resistance

Abstract Background: Fusarium head blight (FHB), primarily caused by Fusarium graminearum, is a major threat to wheat production and food security worldwide. Breeding stably and durably resistant cultivars is the most effective approach for managing and controlling the disease. The success of FHB resistance breeding relies on identification of an effective resistant germplasm. We performed a genome-wide association study (GWAS) using the high-density wheat 90K single nucleotide polymorphism (SNP) assays to better understand the genetic basis of FHB resistance in natural population and identify associated molecular markers. Results: The resistance to FHB fungal spread along the rachis (Type II resistance) was evaluated on 171 wheat cultivars in the 2016-2017 (abbr. as 2017) and 2017-2018 (abbr. as 2018) growing seasons. Using Illumina Infinum iSelect 90K SNP genotyping data, a genome-wide association study (GWAS) identified 26 loci (88 marker-trait associations), which explained 6.65-14.18% of the phenotypic variances. The associated loci distributed across all chromosomes except 2D, 6A, 6D and 7D, with those on chromosomes 1B, 4A, 5D and 7A being detected in both years. New loci for Type II resistance were found on syntenic genomic regions of chromsome 4AL (QFhb-4AL, 621.85-622.24 Mb) and chromosome 5DL (QFhb-5DL, 546.09-547.27 Mb) which showed high collinearity in gene content and order. SNP markers wsnp_JD_c4438_5568170 and wsnp_CAP11_c209_198467 of 5D, reported previously linked to a soil-borne wheat mosaic virus (SBWMV) resistance gene, were also associated with FHB resistance in this study. Conclusion: The syntenic FHB resistant loci and associated SNP markers identified in this study are valuable for FHB resistance breeding via marker-assisted selection.

scholarly journals Dissecting the Contribution of Environmental Influences, Plant Phenology, and Disease Resistance to Improving Genomic Predictions for Fusarium Head Blight Resistance in Wheat

Agronomy ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 2008
Author(s):  
Jose Moreno-Amores ◽  
Sebastian Michel ◽  
Franziska Löschenberger ◽  
Hermann Buerstmayr
Keyword(s):  
Linear Regression ◽  
Fusarium Head Blight ◽  
Genomic Selection ◽  
Linear Regression Analysis ◽  
Fusarium Head Blight Resistance ◽  
Resistance Breeding ◽  
Multiple Linear Regression Analysis ◽  
Head Blight ◽  
Severity Scores ◽  
Fhb Resistance

Environmental factors like temperature and humidity are presumed to greatly influence Fusarium head blight FHB infections in wheat. Anther retention AR, on the other hand, is a morphologically neutral trait that shares a common genetic basis with FHB resistance. In this study, our aims were to: (i) Evaluate two types of corrections of FHB severity scores, namely method-1 via linear regression on flowering time (FT), and method-2 via a best-subset multiple linear regression analysis comprising FT plus accumulated thermal time variables; and (ii) assess the performance of multi-trait genomic selection (MT.GS) models for FHB severity assisted by AR. The forward prediction scenarios where GS models were trained with data from the previous years revealed average prediction accuracies (PA) of 0.28, 0.33, and 0.36 for FHB severity scores that were uncorrected or corrected by method-1 and method-2, respectively. FHB severity scores free from the influences of both environment and phenology seemed to be the most efficient trait to be predicted across different seasons. Average PA increments up to 1.9-fold were furthermore obtained for the MT.GS models, evidencing the feasibility of using AR as an assisting trait to improve the genomic selection of FHB resistance breeding lines.

Genetic variation for resistance to Fusarium head blight in winter durum material

2014 ◽  
Vol 65 (1) ◽  
pp. 46 ◽  
Author(s):  
Thomas Miedaner ◽  
Carl Friedrich Horst Longin
Keyword(s):  
Genetic Variation ◽  
Fusarium Head Blight ◽  
Plant Height ◽  
Fusarium Culmorum ◽  
Heading Time ◽  
Head Blight ◽  
Breeding Lines ◽  
Breeding Material ◽  
Quantitative Genetic ◽  
Fhb Resistance

Durum is one of the most susceptible cereals to infection with Fusarium head blight (FHB) due to the lack of resistance sources. Data on the genetic variation and heritability of FHB in elite durum, and especially the new evolving winter durum, are lacking. Thus, we compared 105 elite, winter durum breeding lines with an international collection of 62 old and new winter durum cultivars. We evaluated the development of FHB after inoculation by Fusarium culmorum, heading time, and plant height at three field environments in Germany. Significant genetic variation for FHB was identified in the elite breeding material as well as in the collection. Mean FHB rating was normally distributed with a heritability of >0.7 for both sets, indicating the quantitative genetic nature of the trait. Taking heading time, plant height, and FHB resistance into account, the most interesting genotypes were identified in the elite breeding material. Consequences for the ongoing global efforts for improvement of FHB resistance of durum are discussed.

scholarly journals Characterizing Winter Wheat Germplasm for Fusarium Head Blight Resistance Under Accelerated Growth Conditions

2021 ◽  
Vol 12 ◽  
Author(s):  
Mustafa Zakieh ◽  
David S. Gaikpa ◽  
Fernanda Leiva Sandoval ◽  
Marwan Alamrani ◽  
Tina Henriksson ◽  
...  
Keyword(s):  
Winter Wheat ◽  
Fusarium Head Blight ◽  
Fusarium Head Blight Resistance ◽  
Resistance Breeding ◽  
Growth Conditions ◽  
Head Blight ◽  
Wheat Germplasm ◽  
Progress Curve ◽  
Accelerated Growth ◽  
Fhb Resistance

Fusarium head blight (FHB) is one of the economically important diseases of wheat as it causes severe yield loss and reduces grain quality. In winter wheat, due to its vernalization requirement, it takes an exceptionally long time for plants to reach the heading stage, thereby prolonging the time it takes for characterizing germplasm for FHB resistance. Therefore, in this work, we developed a protocol to evaluate winter wheat germplasm for FHB resistance under accelerated growth conditions. The protocol reduces the time required for plants to begin heading while avoiding any visible symptoms of stress on plants. The protocol was tested on 432 genotypes obtained from a breeding program and a genebank. The mean area under disease progress curve for FHB was 225.13 in the breeding set and 195.53 in the genebank set, indicating that the germplasm from the genebank set had higher resistance to FHB. In total, 10 quantitative trait loci (QTL) for FHB severity were identified by association mapping. Of these, nine QTL were identified in the combined set comprising both genebank and breeding sets, while two QTL each were identified in the breeding set and genebank set, respectively, when analyzed separately. Some QTLs overlapped between the three datasets. The results reveal that the protocol for FHB evaluation integrating accelerated growth conditions is an efficient approach for FHB resistance breeding in winter wheat and can be even applied to spring wheat after minor modifications.

scholarly journals Genome-wide association mapping revealed syntenic loci QFhb-4AL and QFhb-5DL for Fusarium head blight resistance in common wheat (Triticum aestivum L.)

2019 ◽  
Author(s):  
Wenjing Hu ◽  
Derong Gao ◽  
Hongya Wu ◽  
Jian Liu ◽  
Chunmei Zhang ◽  
...  
Keyword(s):  
Genome Wide Association Study ◽  
Resistance Breeding ◽  
Snp Markers ◽  
Genome Wide Association ◽  
Type Ii ◽  
Head Blight ◽  
Genome Wide ◽  
A Genome ◽  
Fhb Resistance ◽  
Type Ii Resistance

Abstract Background: Fusarium head blight (FHB), primarily caused by Fusarium graminearum, is a major threat to wheat production and food security worldwide. Breeding stably and durably resistant cultivars is the most effective approach for managing and controlling the disease. The success of FHB resistance breeding relies on identification of an effective resistant germplasm. We conducted a genome-wide association study (GWAS) using the high-density wheat 90K single nucleotide polymorphism (SNP) assays to better understand the genetic basis of FHB resistance in natural population and identify associated molecular markers. Results: The resistance to FHB fungal spread along the rachis (Type II resistance) was evaluated on 171 wheat cultivars in the 2016-2017 (abbr. as 2017) and 2017-2018 (abbr. as 2018) growing seasons. Using Illumina Infinum iSelect 90K SNP genotyping data, a genome-wide association study (GWAS) identified 26 loci (88 marker-trait associations), which explained 6.65-14.18% of the phenotypic variances. The associated loci distributed across all chromosomes except 2D, 6A, 6D and 7D, with those on chromosomes 1B, 4A, 5D and 7A being detected in both years. New loci for Type II resistance were found on syntenic genomic regions of chromsome 4AL (QFhb-4AL, 621.85-622.24 Mb) and chromosome 5DL (QFhb-5DL, 546.09-547.27 Mb) which showed high collinearity in gene content and order. SNP markers wsnp_JD_c4438_5568170 and wsnp_CAP11_c209_198467 of 5D, reported previously linked to a soil-borne wheat mosaic virus (SBWMV) resistance gene, were also associated with FHB resistance in this study. Conclusion: The syntenic FHB resistant loci and associated SNP markers identified in this study are valuable for FHB resistance breeding via marker-assisted selection.

Methods of Assessing Fusarium Damage to Wheat Kernels

2019 ◽  
Vol 9 (2) ◽  
pp. 297-308
Author(s):  
Hussein M. Khaeim ◽  
Anthony Clark ◽  
Tom Pearson ◽  
Dr. David Van Sanford
Keyword(s):  
Seed Quality ◽  
Triticum Aestivum L ◽  
Air Separation ◽  
Mass Selection ◽  
Head Blight ◽  
Traditional Methods ◽  
Estimate Method ◽  
Highly Correlated ◽  
Level Of Significance ◽  
Wheat Kernels

Fusarium Head Blight (FHB), or head scab, primarily caused by Fusarium graminearum Schw., is a destructive disease of wheat (Triticum aestivum L.). It has reemerged worldwide as a disease of economic importance. Damage produced by the fungus includes: reduction of yield, mycotoxin contamination (DON), discolored, shriveled “tombstone” kernels and reduction in seed quality. The disease also reduces the test weight and lowers the market grade. Thus, there is great interest among breeders in selecting for resistance to both traits of DON and fusarium damaged kernel (FDK). This study was conducted to determine the effect of mass selection for FHB resistance using an image-based optical sorter compared to other methods. Fusariun damaged kernel (FDK) percentage on a count basis is more accurate than the weight basis, which was obvious in the visual estimate method although they were highly correlated. Visually adjusting the scabby portion (output of air separation machine) increases the accuracy of FDK percentage. Moderate correlations existed between FDK and DON measured by using traditional methods (FDK on basis of visual estimate, FDK on basis of air-separation, traditional methods of DON measurement), NIR, and image-based optical sorter. DON was correlated better with FDK measured by the image-based optical sorter than FDK measured by the air separation machine, NIR, or a visual estimate. The image-based optical sorter is easier to run, not time consuming compared to other methods since the speed of sorting can be adjusted according to the user, and its ability to detect variation among the populations at 0.05 level of significance. Over the twenty populations tested, the data suggest that the image-based optical sorter effectively provides a better way to assess FDK and DON. This method could accelerate FDK and DON assessment, and can be a great tool for breeding programs to assess and select for low FDK and DON.

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