scholarly journals Variation in Platycladus orientalis (Cupressaceae) Reproductive Output and Its Effect on Seed Orchard Crops’ Genetic Diversity

Forests ◽  
2021 ◽  
Vol 12 (11) ◽  
pp. 1429
Author(s):  
Siqian Jiao ◽  
Meiyu Li ◽  
Yuanjiao Zhu ◽  
Shanshan Zhou ◽  
Shiwei Zhao ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Reproductive Output ◽  
First Generation ◽  
Seed Orchard ◽  
Effective Number ◽  
Ecological Value ◽  
Seed Orchards ◽  
Platycladus Orientalis ◽  
Fertility Variation ◽  
Seed Crops

The genetic efficiency of seed orchards is crucial for determining seed crops’ genetic gain and diversity. Platycladus orientalis is a conifer tree of important ecological value in China. Here, we assessed the reproductive output (fertility) variation for 166 clones in a first-generation P. orientalis seed orchard over five years and across three years for each gender (female: 2017, 2018, and 2020 and male: 2017, 2019, and 2021). Fertility variation and genetic diversity parameters were estimated for each gender-year combination. The reproductive output (fertility) variation differed among years, provinces, clones nested within provinces, and ramets within clones. We observed asymmetry in the gender reproductive output and parental imbalance and determined their profound effects on the genetic diversity of these seed crops. The maleness index revealed the existence of female-biased or male-biased clones. When seeds from multiple individuals and years were blended, we found an increase in the effective number of parents (Np) and in genetic diversity (GD), and a reduced fertility variation (Ψ) in the seed orchard. When we set the effective number of parents (Np) to 30, the GD of the seed orchard could be maintained at more than 95%. Thus, achieving genetic diversity balance in seed production can be accomplished through monitoring the fertility variation of orchards and through the utilization of the thereby generated information for the advanced generation of seed orchards.

scholarly journals Gender, reproductive output covariation and their role on gene diversity of Pinus koraiensis seed orchard crops

2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Ji-Min Park ◽  
Hye-In Kang ◽  
Da-Bin Yeom ◽  
Kyu-Suk Kang ◽  
Yousry A. El-Kassaby ◽  
...  
Keyword(s):  
Gene Diversity ◽  
Fundamental Equation ◽  
Seed Orchard ◽  
Pinus Koraiensis ◽  
Effective Number ◽  
Effective Population ◽  
Management Options ◽  
Fertility Variation ◽  
Census Number ◽  
Seed Crops

Abstract Background Gender and fertility variation have an impact on mating dynamics in a population because they affect the gene exchange among parental members and the genetic composition of the resultant seed crops. Fertility is the proportional gametic contribution of parents to their progeny. An effective number of parents, derivative of effective population size, is the probability that two alleles randomly chosen from the gamete gene pool originated from the same parent. The effective number of parents is directly related to the fertility variation among parents, which should be monitored for manipulating gene diversity of seed crops. We formulated a fundamental equation of estimating the effective number of parents and applied it to a seed production population. Results Effective number of parents (Np) was derived from fertility variation (Ψ) considering covariance (correlation coefficient, r) between maternal and paternal fertility. The Ψ was calculated from the coefficient of variation in reproductive outputs and divided into female (ψf) and male (ψm) fertility variation in the population under study. The Np was estimated from the parental Ψ estimated by the fertility variation of maternal (ψf) and paternal (ψm) parents. The gene diversity of seed crops was monitored by Ψ and Np. in a 1.5 generation Pinus koraiensis seed orchard as a case of monoecious species. A large variation of female and male strobili production was observed among the studied 52 parents over four consecutive years, showing statistically significant differences across all studied years. Parental balance curve showed greater distortion in paternal than maternal parents. The Ψ ranged from 1.879 to 4.035 with greater ψm than ψf, and the Np varied from 14.8 to 36.8. When pooled, the relative effective number of parents was improved as 80.0% of the census number. Conclusions We recommend the use of fertility variation (i.e., CV, Ψ), Person’s product-moment correlation (r), and effective number of parents (Np) as tools for gauging gene diversity of seed crops in production populations. For increasing Np and gene diversity, additional management options such as mixing seed-lots, equal cone harvest and application of supplemental-mass-pollination are recommended.

scholarly journals Gender, reproductive output covariation and their role on gene diversity of Pinus koraiensis seed orchard crops

2020 ◽  
Author(s):  
Kyu-Suk Kang ◽  
Ji-Min Park ◽  
Hye-In Kang ◽  
Da-Bin Yeom ◽  
Yousry A. El-Kassaby ◽  
...  
Keyword(s):  
Gene Diversity ◽  
Fundamental Equation ◽  
Seed Orchard ◽  
Pinus Koraiensis ◽  
Effective Number ◽  
Effective Population ◽  
Management Options ◽  
Fertility Variation ◽  
Census Number ◽  
Seed Crops

Abstract Background: Gender and fertility variation have an impact on mating dynamics in a population because they affect the gene exchange among parental members and the genetic composition of the resultant seed crops. Fertility is the proportional gametic contribution of parents to their progeny. An effective number of parents, derivative of effective population size, is the probability that two alleles randomly chosen from the gamete gene pool originated from the same parent. The effective number of parents is directly related to the fertility variation among parents, which should be monitored for manipulating gene diversity of seed crops. We formulated a fundamental equation of estimating the effective number of parents and applied it to a seed production population.Results: Effective number of parents (Np) was derived from fertility variation (Y) considering covariance (correlation coefficient, r) between maternal and paternal fertility. The Y was calculated from the coefficient of variation in reproductive outputs and divided into female (yf) and male (ym) fertility variation in the population under study. The Np was estimated from the parental Y estimated by the fertility variation of maternal (yf) and paternal (ym) parents. The gene diversity of seed crops was monitored by Y and Np. in a 1.5 generation Pinus koraiensis seed orchard as a case of monoecious species. A large variation of female and male strobili production was observed among the studied 52 parents for four consecutive years, showing statistically significant across all studied years. Parental balance curve showed greater distortion in paternal parents than maternal parents. The Y ranged from 1.879 to 4.035 with greater ym than yf, and the Np varied from 14.8 to 36.8. When pooled, the relative effective number of parents was improved as 80.0% of the census number. Conclusions: We recommend the use of fertility variation (i.e., CV, Y), Person’s product-moment correlation (r) and effective number of parents (Np) as tools for gauging gene diversity of seed crops in production populations. For increasing Np and gene diversity, additional management options such as mixing seed-lots, equal cone harvest and application of supplemental-mass-pollination are recommended.

scholarly journals Gender, reproductive output covariation and their role on gene diversity of Pinus koraiensis seed orchard crops

2020 ◽  
Author(s):  
Ji-Min Park ◽  
Hye-In Kang ◽  
Da-Bin Yeom ◽  
Kyu-Suk Kang ◽  
Yousry A. El-Kassaby ◽  
...  
Keyword(s):  
Gene Diversity ◽  
Fundamental Equation ◽  
Seed Orchard ◽  
Pinus Koraiensis ◽  
Effective Number ◽  
Effective Population ◽  
Management Options ◽  
Fertility Variation ◽  
Census Number ◽  
Seed Crops

Abstract Background: Gender and fertility variation have an impact on mating dynamics in a population because they affect the gene exchange among parental members and the genetic composition of the resultant seed crops. Fertility is the proportional gametic contribution of parents to their progeny. An effective number of parents, derivative of effective population size, is the probability that two alleles randomly chosen from the gamete gene pool originated from the same parent. The effective number of parents is directly related to the fertility variation among parents, which should be monitored for manipulating gene diversity of seed crops. We formulated a fundamental equation of estimating the effective number of parents and applied it to a seed production population.Results: Effective number of parents (Np) was derived from fertility variation (Y) considering covariance (correlation coefficient, r) between maternal and paternal fertility. The Y was calculated from the coefficient of variation in reproductive outputs and divided into female (yf) and male (ym) fertility variation in the population under study. The Np was estimated from the parental Y estimated by the fertility variation of maternal (yf) and paternal (ym) parents. The gene diversity of seed crops was monitored by Y and Np. in a 1.5 generation Pinus koraiensis seed orchard as a case of monoecious species. A large variation of female and male strobili production was observed among the studied 52 parents over four consecutive years, showing statistically significant differences across all studied years. Parental balance curve showed greater distortion in paternal than maternal parents. The Y ranged from 1.879 to 4.035 with greater ym than yf, and the Np varied from 14.8 to 36.8. When pooled, the relative effective number of parents was improved as 80.0% of the census number.Conclusions: We recommend the use of fertility variation (i.e., CV, Y), Person’s product-moment correlation (r), and effective number of parents (Np) as tools for gauging gene diversity of seed crops in production populations. For increasing Np and gene diversity, additional management options such as mixing seed-lots, equal cone harvest and application of supplemental-mass-pollination are recommended.

Pollination dynamics in a Platycladus orientalis seed orchard as revealed by partial pedigree reconstruction

2018 ◽  
Vol 48 (8) ◽  
pp. 952-957 ◽  
Author(s):  
Li-Sha Huang ◽  
Jiayin Song ◽  
Yan-Qiang Sun ◽  
Qiong Gao ◽  
Si-Qian Jiao ◽  
...  
Keyword(s):  
First Generation ◽  
Management Practices ◽  
Seed Orchard ◽  
Male Reproductive Success ◽  
Pedigree Reconstruction ◽  
Parental Population ◽  
Seed Crop ◽  
Platycladus Orientalis ◽  
High Level ◽  
Seed Crops

Pollination dynamics was studied in a first-generation Platycladus orientalis (L.) Franco seed orchard with pedigree reconstruction using eight nuclear and four chloroplast SSRs. The pedigree reconstruction assigned 371 of 448 studied seeds to one of the orchard’s 192 candidate male parents and showed a high level of outcrossing and pollen contamination in the orchard’s seed crop. While the orchard’s seed population showed greater allelic richness compared with the parental population, a few alleles present in the parental population were missing in the seed crop. Additionally, we detected no significant correlation between male reproductive energy (pollen yield) and male reproductive success; however, uneven parental contribution was also observed. Pollen management practices were recommended to ensure the maintenance of genetic diversity in the seed crops and increase in genetic gain.

scholarly journals Gender, reproductive output covariation and their role on gene diversity of Pinus koraiensis seed orchard crops

2020 ◽  
Author(s):  
Kyu-Suk Kang ◽  
Ji-Min Park ◽  
Hye-In Kang ◽  
Da-Bin Yeom ◽  
Yousry A. El-Kassaby ◽  
...  
Keyword(s):  
Gene Diversity ◽  
Fundamental Equation ◽  
Seed Orchard ◽  
Pinus Koraiensis ◽  
Effective Number ◽  
Effective Population ◽  
Management Options ◽  
1.5 Generation ◽  
Fertility Variation ◽  
Seed Crops

Abstract Background: Gender and fertility variation have an impact on mating dynamics in a population because they affect the gene exchange among parental members and the genetic composition of the resultant seed crops. Fertility is the proportional gametic contribution of parents to their progeny. An effective number of parents, derivative of effective population size, is the probability that two alleles randomly chosen from the gamete gene pool originated from the same parent. The effective number of parents is directly related to the fertility variation among parents, which should be monitored for manipulating gene diversity of seed crops. We formulated a fundamental equation of estimating the effective number of parents and applied it to a seed production population.Results: Effective number of parents (Np) was derived from fertility variation (Ψ) considering covariance (correlation coefficient, r) between maternal and paternal fertility. The Ψ was calculated from the coefficient of variation in reproductive outputs and divided into female (ψf ) and male (ψm) fertility variation in the population under study. The Np was estimated from the parental Ψ estimated by the fertility variation of maternal (ψf ) and paternal (ψm) parents. The gene diversity of seed crops was monitored by Ψ and Np in a 1.5 generation Pinus koraiensis seed orchard as a case of monoecious species. A large variation of female and male strobili production was observed among the studied 52 parents for four consecutive years, showing statistically significant across all studied years. Parental balance curve showed greater distortion in paternal than maternal parents. The Ψ ranged from 1.879 to 4.035 with greater ψm than ψf , and the Np varied from 14.8 to 36.8. When pooled, the relative effective number of parents was improved as 80.0% of the census number.Conclusions: We recommend the use of fertility variation (CV, Ψ), Person’s product-moment correlation (r) and effective number of parents (Np) as tools for gauging gene diversity of seed crops in production populations. For increasing Np and gene diversity, additional management options such as mixing seed-lots, equal cone harvest and application of supplemental-mass-pollination are recommended.

Field performance and early test results of offspring from two Norway spruce seed orchards containing clones transferred to warmer climates

2007 ◽  
Vol 37 (3) ◽  
pp. 515-522 ◽  
Author(s):  
Tore Skrøppa ◽  
Ketil Kohmann ◽  
Øystein Johnsen ◽  
Arne Steffenrem ◽  
Øyvind M. Edvardsen
Keyword(s):  
Norway Spruce ◽  
Field Performance ◽  
Seed Orchard ◽  
Field Trials ◽  
Climatic Conditions ◽  
Test Results ◽  
Seed Orchards ◽  
Low Altitude ◽  
Natural Stands ◽  
Seed Crops

We present results from early tests and field trials of offspring from two Norway spruce ( Picea abies (L.) Karst.) seed orchards containing clones that have been transferred from high altitudes to sea level and from northern to southern latitudes. Seedlings from seeds produced in the low-altitude seed orchard developed frost hardiness later at the end of the growth season, flushed later in field trials, and grew taller than seedlings from seeds produced in natural stands. They had the lowest mortality rate and the lowest frequency of injuries in the field trials. Similar results were observed in seedlings from seeds produced in the southern seed orchard. We found no adverse effects of the changed growth rhythm. Seedlings from two seed crops in the southern orchard, produced in years with a warm and a cold summer, had different annual growth rhythms. The results are explained mainly by the effects of the climatic conditions during the reproductive phase. Seed crops from different years in the same seed orchard may produce seedlings that perform as if they were from different provenances. It is argued that the effects of the climatic conditions during seed production must contribute to the variation among provenances of Norway spruce.

scholarly journals Comparison of Genetic Diversity in Naturally Regenerated Norway Spruce Stands and Seed Orchard Progeny Trials

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 926 ◽  
Author(s):  
Dainis Ruņģis ◽  
Solveiga Luguza ◽  
Endijs Bāders ◽  
Vilnis Šķipars ◽  
Āris Jansons
Keyword(s):  
Genetic Diversity ◽  
Norway Spruce ◽  
Gene Diversity ◽  
Seed Orchard ◽  
Seed Orchards ◽  
Spruce Stands ◽  
Ssr Loci ◽  
Naturally Regenerated Stands ◽  
Average Gene ◽  
Environmental Events

Forest ecosystems in Europe are expected to experience changes in temperature and water regimes associated with increased risks of extreme environmental events and disasters. Genetic diversity and relatedness has been linked to resilience of forest stands and landscapes. Genetic diversity indicators were compared between a Norway spruce population naturally regenerated after extensive windthrow and Norway spruce progeny populations derived from two seed orchards. In addition, genetic diversity in an undisturbed stand in a long established national park and a spruce genetic resource stand were analyzed. Populations were genotyped at 11 simple sequence repeat (SSR) loci. Average genetic diversity indicators were similar across populations. However, the total number of alleles, average number of alleles over all loci, effective number of alleles, average gene diversity, and average allelic richness were highest in the naturally regenerated population and lowest in one of the seed orchard progeny populations. The genetic diversity in progeny from seed orchards used for stand renewal is comparable to the genetic diversity in naturally regenerated stands. However, fluctuations in seed production between years can have a large impact on genetic diversity in seed orchard progeny. The use of improved Norway spruce germplasm deployed via clonal seed orchards for forest renewal can maintain similar levels of genetic diversity compared to naturally regenerated stands, while also increasing production and timber quality.

scholarly journals Fertility Variation and Genetic Diversity in a Clonal Seed Orchard of Cryptomeria japonica

2005 ◽  
Vol 54 (1-6) ◽  
pp. 104-107 ◽  
Author(s):  
K. S. Kang ◽  
Y. A. El-Kassaby ◽  
M. S. Chung ◽  
C. S. Kim ◽  
Y. J. Kang ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Cryptomeria Japonica ◽  
Seed Orchard ◽  
Clonal Seed Orchard ◽  
Fertility Variation ◽  
The Status ◽  
Status Number ◽  
Census Number ◽  
Male Strobilus ◽  
Male Strobili

Abstract Clonal differences in fertility (expressed as the number of female and male strobili) were determined for three consecutive years (2002-2004) in a clonal seed orchard of sugi (Cryptomeria japonica D. Don) in Korea. Fertility varied among clones and among years producing three-year averages of 196 and 652 for female and male strobili per ramet, respectively. Correlation between female and male strobilus production was positive over the three years and statistically significant in 2003, a good flowering year. Based on the observed fertility variation, the status numbers (Ns, measure of genetic diversity) were calculated and varied from 25.6 to 31.7 among the three studied years. On average (pooled), relative status number was 86% of the census number (N). Variation in female fertility was higher than that in male fertility, and this variation was reflected on female and male parents’ status numbers. Pooled Ns estimated from the three years was higher than that for any single year, implying that genetic diversity would increase when seeds collected from different years are pooled.

Clonal-row versus random seed orchard designs: interior spruce mating system evaluation

2007 ◽  
Vol 37 (3) ◽  
pp. 690-696 ◽  
Author(s):  
Y.A. El-Kassaby ◽  
M.U. Stoehr ◽  
D. Reid ◽  
C.G. Walsh ◽  
T.E. Lee
Keyword(s):  
Mating System ◽  
Minor Component ◽  
Slight Modification ◽  
Seed Orchard ◽  
Outcrossing Rate ◽  
Genetic Quality ◽  
Seed Orchards ◽  
Interior Spruce ◽  
Seed Crops ◽  
A Minor

Mating system pattern (selfing or outcrossing and correlated matings levels) comparisons between two interior spruce seed orchard designs (clonal-row and random) managed under intensive crown and pollen management were conducted. Crown manipulation consisted of tree topping and branch pruning, while pollen management involved multiple supplemental mass-pollination applications during peak seed-cone reproductive receptivity and pollen agitation using helicopters. Significant differences between orchards’ multilocus outcrossing rate estimates were observed, and both estimates significantly departed from complete outcrossing (t = 1.0). Clonal arrangements in the clonal-row design permitted higher chances for selfing (t = 0.948) in comparison with those of the random design (t = 0.989). Intensive pollen management, while effective, still produced a minor component of selfing. Both orchard designs produced similar individual tree's outcrossing rate trends with the majority showing high outcrossing, while few individuals showed high selfing propensity. Estimates of correlated mating varied substantially between the two seed orchard designs with 9.3% and 4.3% for the clonal-row and random seed orchards, respectively. While small but significant differences in the genetic quality of the seed crops were observed between the two orchard designs, the establishment of clonal-row seed orchards should be given serious considerations specifically under committed pollen and crown management. The ease of crop and orchard management in the clonal-row design outweighs the observed differences in the seed crop genetic quality. A slight modification to the clonal-row design is proposed and is expected to reduce the observed minor genetic quality differences between the two orchard designs.

scholarly journals Genetic diversity of seeds from four German Douglas fir (Pseudotsuga menziesii) seed orchards

2021 ◽  
Author(s):  
Birte Pakull ◽  
Pascal Eusemann ◽  
Janine Wojacki ◽  
Diana Ahnert ◽  
Heike Liesebach
Keyword(s):  
Genetic Diversity ◽  
Pseudotsuga Menziesii ◽  
Seed Orchard ◽  
Small Population ◽  
Douglas Fir ◽  
Next Generation ◽  
Seed Orchards ◽  
Population Sizes ◽  
Spatial Isolation ◽  
Offspring Generation

AbstractIn Germany, Douglas fir (Pseudotsuga menziesii Franco) is seen as a valuable species for future cultivation in times of climate change. Local seed production in seed stands and seed orchards may secure that local adaptation is transferred to the next generation, but small population sizes could lower genetic diversity and thus future adaptability. Here we analyse the transfer of genetic diversity from parent to offspring generation in four older German seed orchards. We detected low pollen contamination rates due to high levels of spatial isolation. Even with a relatively low number of 40 clones, seed orchard design with randomized and repeated planting of clones led to low selfing rates, and despite uneven parental contributions, the number of successful parents and the level of genetic intermixture were high enough to allow the transfer of an adequate part of the genetic diversity to the next generation. Larger numbers, however, might be needed to reliably conserve the entire genetic diversity over succeeding generations. Conclusions on the establishment of future seed orchards and regarding areas requiring further research are drawn at the end of the paper.

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