scholarly journals Coral Reef Mapping with Remote Sensing and Machine Learning: A Nurture and Nature Analysis in Marine Protected Areas

2021 ◽  
Vol 13 (15) ◽  
pp. 2907
Author(s):  
Camila Brasil Louro da Silveira ◽  
Gil Marcelo Reuss Strenzel ◽  
Mauro Maida ◽  
Ana Lídia Bertoldi Gaspar ◽  
Beatrice Padovani Ferreira

Mapping habitats is essential to assist strategic decisions regarding the use and protection of coral reefs. Coupled with machine learning (ML) algorithms, remote sensing has allowed detailed mapping of reefs at meaningful scales. Here we integrated WorldView-3 and Landsat-8 imagery and ML techniques to produce a map of suitable habitats for the occurrence of a model species, the hydrocoral Millepora alcicornis, in coral reefs located inside marine protected areas in Northeast Brazil. Conservation and management efforts in the region were also analyzed, integrating human use layers to the ecological seascape. Three ML techniques were applied: two to derive base layers, namely geographically weighted regressions for bathymetry and support vector machine classifier (SVM) for habitat mapping, and one to build the species distribution model (MaxEnt) for Millepora alcicornis, a conspicuous and important reef-building species in the area. Additionally, human use was mapped based on the presence of tourists and fishers. SVM yielded 15 benthic classes (e.g., seagrass, sand, coral), with an overall accuracy of 79%. Bathymetry and its derivative layers depicted the topographical complexity of the area. The Millepora alcicornis distribution model identified distance from the shore and depth as topographical factors limiting the settling and growth of coral colonies. The most important variables were ecological, showing the importance of maintaining high biodiversity in the ecosystem. The comparison of the habitat suitability model with species absence and human use maps indicated the impact of direct human activities as potential inhibitors of coral development. Results reinforce the importance of the establishment of no-take zones and other protective measures for maintaining local biodiversity.

2021 ◽  
Vol 11 (21) ◽  
pp. 10062
Author(s):  
Aimin Li ◽  
Meng Fan ◽  
Guangduo Qin ◽  
Youcheng Xu ◽  
Hailong Wang

Monitoring open water bodies accurately is important for assessing the role of ecosystem services in the context of human survival and climate change. There are many methods available for water body extraction based on remote sensing images, such as the normalized difference water index (NDWI), modified NDWI (MNDWI), and machine learning algorithms. Based on Landsat-8 remote sensing images, this study focuses on the effects of six machine learning algorithms and three threshold methods used to extract water bodies, evaluates the transfer performance of models applied to remote sensing images in different periods, and compares the differences among these models. The results are as follows. (1) Various algorithms require different numbers of samples to reach their optimal consequence. The logistic regression algorithm requires a minimum of 110 samples. As the number of samples increases, the order of the optimal model is support vector machine, neural network, random forest, decision tree, and XGBoost. (2) The accuracy evaluation performance of each machine learning on the test set cannot represent the local area performance. (3) When these models are directly applied to remote sensing images in different periods, the AUC indicators of each machine learning algorithm for three regions all show a significant decline, with a decrease range of 0.33–66.52%, and the differences among the different algorithm performances in the three areas are obvious. Generally, the decision tree algorithm has good transfer performance among the machine learning algorithms with area under curve (AUC) indexes of 0.790, 0.518, and 0.697 in the three areas, respectively, and the average value is 0.668. The Otsu threshold algorithm is the optimal among threshold methods, with AUC indexes of 0.970, 0.617, and 0.908 in the three regions respectively and an average AUC of 0.832.


2014 ◽  
Vol 2014 ◽  
pp. 1-7 ◽  
Author(s):  
Boaz Yuval ◽  
Lee Sudai ◽  
Yarden Ziv

Holothuroid sea cucumbers are vital members of Coral Reefs and associated marine habitats and provide vital ecological services. In the southern regions of the Red Sea their populations have been decimated by overfishing. The main objective of this study was to test the hypothesis that the northern part of the Red Sea serves as an ecological refuge for the species threatened farther to the south. Accordingly, populations of sea cucumbers in 4 shallow sites south of Eilat, Israel (29°33′00N 34°57′14E), were repeatedly surveyed from November 2013 to April 2014. Overall 11 species were observed in these shallow sites. Their abundance and diversity differed significantly between sites, but not temporally. In sites in marine protected areas, with an intact fringing reef, diversity was high, withHolothuria edulisandBohadschiasp. being the most common species. In areas with higher human use and characterized by rubble and scattered corals, diversity was low, andActinopyga bannwarthiwas the most common species. The observed abundance and diversity did not support the refuge hypothesis. These findings are discussed in relation to other surveys of abundance and diversity in similar habitats.


2020 ◽  
Vol 12 (9) ◽  
pp. 1375
Author(s):  
Md Mizanur Rahman ◽  
Xunhe Zhang ◽  
Imran Ahmed ◽  
Zaheer Iqbal ◽  
Mojtaba Zeraatpisheh ◽  
...  

Carbon to nitrogen ratio (C:N) of senescent leaf is a crucial functional trait and indicator of litter quality that affects belowground carbon and nitrogen cycles, especially soil decomposition. Although mapping the C:N ratio of fresh mature canopies has been attempted, few studies have attempted to map the C:N ratio of senescent leaves, particularly in mangroves. In this study, four machine learning models (Stochastic Gradient Boosting, SGB; Random Forest, RF; Support Vector Machine, SVM; and Partial Least Square Regression, PLSR) were compared for testing the predictability of using the Landsat TM 5 (LTM5) and Landsat 8 to map spatial and temporal distribution of C:N ratio of senescent leaves in Sundarbans Reserved Forest (SRF), Bangladesh. Surface reflectance of bands, texture metrics of bands and vegetation indices of LTM5 and Landsat 8 yearly composite images were extracted using Google Earth Engine for 2009–2010 and 2019. We found SGB, RF and SVM were significant different from PLSR based on MAE, RMSE, and R2 (p < 0.05). Our results indicate that remote sensing data, such as Landsat TM data, can be used to map the C:N ratio of senescent leaves in mangroves with reasonable accuracy. We also found that the mangroves had a high spatial variation of C:N ratio and the C:N ratio map developed in the current study can be used for improving the biogeochemical and ecosystem models in the mangroves.


2020 ◽  
Vol 3 (1) ◽  
pp. 11-23 ◽  
Author(s):  
Abdulla Al Kafy ◽  
Abdullah Al-Faisal ◽  
Mohammad Mahmudul Hasan ◽  
Md. Soumik Sikdar ◽  
Mohammad Hasib Hasan Khan ◽  
...  

Urbanization has been contributing more in global climate warming, with more than 50% of the population living in cities. Rapid population growth and change in land use / land cover (LULC) are closely linked. The transformation of LULC due to rapid urban expansion significantly affects the functions of biodiversity and ecosystems, as well as local and regional climates. Improper planning and uncontrolled management of LULC changes profoundly contribute to the rise of urban land surface temperature (LST). This study evaluates the impact of LULC changes on LST for 1997, 2007 and 2017 in the Rajshahi district (Bangladesh) using multi-temporal and multi-spectral Landsat 8 OLI and Landsat 5 TM satellite data sets. The analysis of LULC changes exposed a remarkable increase in the built-up areas and a significant decrease in the vegetation and agricultural land. The built-up area was increased almost double in last 20 years in the study area. The distribution of changes in LST shows that built-up areas recorded the highest temperature followed by bare land, vegetation and agricultural land and water bodies. The LULC-LST profiles also revealed the highest temperature in built-up areas and the lowest temperature in water bodies. In the last 20 years, LST was increased about 13ºC. The study demonstrates decrease in vegetation cover and increase in non-evaporating surfaces with significantly increases the surface temperature in the study area. Remote-sensing techniques were found one of the suitable techniques for rapid analysis of urban expansions and to identify the impact of urbanization on LST.


2021 ◽  
Vol 13 (4) ◽  
pp. 641
Author(s):  
Gopal Ramdas Mahajan ◽  
Bappa Das ◽  
Dayesh Murgaokar ◽  
Ittai Herrmann ◽  
Katja Berger ◽  
...  

Conventional methods of plant nutrient estimation for nutrient management need a huge number of leaf or tissue samples and extensive chemical analysis, which is time-consuming and expensive. Remote sensing is a viable tool to estimate the plant’s nutritional status to determine the appropriate amounts of fertilizer inputs. The aim of the study was to use remote sensing to characterize the foliar nutrient status of mango through the development of spectral indices, multivariate analysis, chemometrics, and machine learning modeling of the spectral data. A spectral database within the 350–1050 nm wavelength range of the leaf samples and leaf nutrients were analyzed for the development of spectral indices and multivariate model development. The normalized difference and ratio spectral indices and multivariate models–partial least square regression (PLSR), principal component regression, and support vector regression (SVR) were ineffective in predicting any of the leaf nutrients. An approach of using PLSR-combined machine learning models was found to be the best to predict most of the nutrients. Based on the independent validation performance and summed ranks, the best performing models were cubist (R2 ≥ 0.91, the ratio of performance to deviation (RPD) ≥ 3.3, and the ratio of performance to interquartile distance (RPIQ) ≥ 3.71) for nitrogen, phosphorus, potassium, and zinc, SVR (R2 ≥ 0.88, RPD ≥ 2.73, RPIQ ≥ 3.31) for calcium, iron, copper, boron, and elastic net (R2 ≥ 0.95, RPD ≥ 4.47, RPIQ ≥ 6.11) for magnesium and sulfur. The results of the study revealed the potential of using hyperspectral remote sensing data for non-destructive estimation of mango leaf macro- and micro-nutrients. The developed approach is suggested to be employed within operational retrieval workflows for precision management of mango orchard nutrients.


2021 ◽  
Vol 10 (2) ◽  
pp. 58
Author(s):  
Muhammad Fawad Akbar Khan ◽  
Khan Muhammad ◽  
Shahid Bashir ◽  
Shahab Ud Din ◽  
Muhammad Hanif

Low-resolution Geological Survey of Pakistan (GSP) maps surrounding the region of interest show oolitic and fossiliferous limestone occurrences correspondingly in Samanasuk, Lockhart, and Margalla hill formations in the Hazara division, Pakistan. Machine-learning algorithms (MLAs) have been rarely applied to multispectral remote sensing data for differentiating between limestone formations formed due to different depositional environments, such as oolitic or fossiliferous. Unlike the previous studies that mostly report lithological classification of rock types having different chemical compositions by the MLAs, this paper aimed to investigate MLAs’ potential for mapping subclasses within the same lithology, i.e., limestone. Additionally, selecting appropriate data labels, training algorithms, hyperparameters, and remote sensing data sources were also investigated while applying these MLAs. In this paper, first, oolitic (Samanasuk), fossiliferous (Lockhart and Margalla) limestone-bearing formations along with the adjoining Hazara formation were mapped using random forest (RF), support vector machine (SVM), classification and regression tree (CART), and naïve Bayes (NB) MLAs. The RF algorithm reported the best accuracy of 83.28% and a Kappa coefficient of 0.78. To further improve the targeted allochemical limestone formation map, annotation labels were generated by the fusion of maps obtained from principal component analysis (PCA), decorrelation stretching (DS), X-means clustering applied to ASTER-L1T, Landsat-8, and Sentinel-2 datasets. These labels were used to train and validate SVM, CART, NB, and RF MLAs to obtain a binary classification map of limestone occurrences in the Hazara division, Pakistan using the Google Earth Engine (GEE) platform. The classification of Landsat-8 data by CART reported 99.63% accuracy, with a Kappa coefficient of 0.99, and was in good agreement with the field validation. This binary limestone map was further classified into oolitic (Samanasuk) and fossiliferous (Lockhart and Margalla) formations by all the four MLAs; in this case, RF surpassed all the other algorithms with an improved accuracy of 96.36%. This improvement can be attributed to better annotation, resulting in a binary limestone classification map, which formed a mask for improved classification of oolitic and fossiliferous limestone in the area.


Electronics ◽  
2020 ◽  
Vol 9 (2) ◽  
pp. 374 ◽  
Author(s):  
Sudhanshu Kumar ◽  
Monika Gahalawat ◽  
Partha Pratim Roy ◽  
Debi Prosad Dogra ◽  
Byung-Gyu Kim

Sentiment analysis is a rapidly growing field of research due to the explosive growth in digital information. In the modern world of artificial intelligence, sentiment analysis is one of the essential tools to extract emotion information from massive data. Sentiment analysis is applied to a variety of user data from customer reviews to social network posts. To the best of our knowledge, there is less work on sentiment analysis based on the categorization of users by demographics. Demographics play an important role in deciding the marketing strategies for different products. In this study, we explore the impact of age and gender in sentiment analysis, as this can help e-commerce retailers to market their products based on specific demographics. The dataset is created by collecting reviews on books from Facebook users by asking them to answer a questionnaire containing questions about their preferences in books, along with their age groups and gender information. Next, the paper analyzes the segmented data for sentiments based on each age group and gender. Finally, sentiment analysis is done using different Machine Learning (ML) approaches including maximum entropy, support vector machine, convolutional neural network, and long short term memory to study the impact of age and gender on user reviews. Experiments have been conducted to identify new insights into the effect of age and gender for sentiment analysis.


2021 ◽  
Vol 208 ◽  
pp. 104880
Author(s):  
Sami Khanal ◽  
Andrew Klopfenstein ◽  
Kushal KC ◽  
Venkatesh Ramarao ◽  
John Fulton ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Arturo Moncada-Torres ◽  
Marissa C. van Maaren ◽  
Mathijs P. Hendriks ◽  
Sabine Siesling ◽  
Gijs Geleijnse

AbstractCox Proportional Hazards (CPH) analysis is the standard for survival analysis in oncology. Recently, several machine learning (ML) techniques have been adapted for this task. Although they have shown to yield results at least as good as classical methods, they are often disregarded because of their lack of transparency and little to no explainability, which are key for their adoption in clinical settings. In this paper, we used data from the Netherlands Cancer Registry of 36,658 non-metastatic breast cancer patients to compare the performance of CPH with ML techniques (Random Survival Forests, Survival Support Vector Machines, and Extreme Gradient Boosting [XGB]) in predicting survival using the $$c$$ c -index. We demonstrated that in our dataset, ML-based models can perform at least as good as the classical CPH regression ($$c$$ c -index $$\sim \,0.63$$ ∼ 0.63 ), and in the case of XGB even better ($$c$$ c -index $$\sim 0.73$$ ∼ 0.73 ). Furthermore, we used Shapley Additive Explanation (SHAP) values to explain the models’ predictions. We concluded that the difference in performance can be attributed to XGB’s ability to model nonlinearities and complex interactions. We also investigated the impact of specific features on the models’ predictions as well as their corresponding insights. Lastly, we showed that explainable ML can generate explicit knowledge of how models make their predictions, which is crucial in increasing the trust and adoption of innovative ML techniques in oncology and healthcare overall.


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