scholarly journals Genetic Diversity, Advance, Heritability and Heterosis Estimation in F1 Hybrids and Parental Lines of Maize

2020 ◽  
Vol 15 (1) ◽  
pp. 1-6
Author(s):  
Vincent Ishola Esa ◽  
Oluwafemi Oyeniyi Om ◽  
Amos Afolarin O ◽  
Rachael Adebayo ◽  
Titilayo E. Sangoyo
Keyword(s):  
Genetic Diversity ◽  
F1 Hybrids ◽  
Parental Lines

Genetic diversity of native cultivated cacao accessions (Theobroma cacao L.) in Nicaragua

2012 ◽  
Vol 10 (3) ◽  
pp. 254-257
Author(s):  
Erwin Aragon ◽  
Claudia Rivera ◽  
Helena Korpelainen ◽  
Aldo Rojas ◽  
Paula Elomaa ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Theobroma Cacao ◽  
Phytophthora Palmivora ◽  
Genetic Composition ◽  
Breeding Programmes ◽  
Black Pod ◽  
Black Pod Disease ◽  
Parental Lines ◽  
Resistant Genotypes ◽  
Theobroma Cacao L

A total of 60 farmers' cacao accessions (Theobroma cacao L.) from Nicaragua were investigated using microsatellite markers to reveal their genetic composition and to identify potentially resistant genotypes against the black pod disease caused by Phytophthora palmivora. These accessions were compared with 21 breeders' accessions maintained locally, two Criollo accessions from Costa Rica and two accessions from Ecuador. The analyses showed a low level of differentiation among groups of farmers' accessions (FST = 0.06) and that six Nicaraguan accessions were genetically closely related to the two Criollo accessions used as a reference. In addition, seven distinct genotypes were found to have allelic composition that may indicate linkage to resistance alleles, thus being potential parental lines in future breeding programmes.

scholarly journals Diversity Assessment of Some Sesame (Sesamum indicum L.) Genotypes Cultivated in Northern Ghana Using Morphological and Simple Sequence Repeat (SSR) Markers

2019 ◽  
Vol 2019 ◽  
pp. 1-10 ◽  
Author(s):  
Raphael Adu-Gyamfi ◽  
Ruth Prempeh ◽  
Issahaku Zakaria
Keyword(s):  
Genetic Diversity ◽  
Plant Height ◽  
Ssr Markers ◽  
Analysis Of Variance ◽  
Morphological Data ◽  
Northern Ghana ◽  
Land Races ◽  
Diversity Assessment ◽  
Parental Lines ◽  
Number Of Seeds

In Ghana, sesame is cultivated in some districts of northern Ghana. Genotypes cultivated are land races that are low yielding leading to decline in production. There is the need for improvement of these land races to generate high yielding cultivars. Characterization of genetic diversity of the sesame land races will be of great value in assisting in parental lines selection for sesame breeding programmes in Ghana. Twenty-five sesame land races were collected from five districts in northern Ghana noted for sesame cultivation. Seeds collected were planted in three replicates in randomized complete block design and were evaluated for a number of morphological characters. Data collected were subjected to Principal Component Analysis (PCA) and a dendrogram showing similarity between the accessions were drawn. Data on number of capsules per plant, number of seeds per capsule, and plant height at flowering were subjected to analysis of variance using GenStat Discovery Edition 4. Molecular genetic diversity was assessed by using thirty eight SSR markers widely distributed across sesame genome to characterize the materials. Twenty-one out of the 38 primers were polymorphic. Cluster analyses using the Euclidean similarity test and a complete link clustering method were used to make a dendrogram out of the morphological data. Analysis of variance showed that capsule number was significantly different; a range of 54.9 and 146.7 was produced. The number of seeds per capsule varied significantly and the variation between highest and lowest accession in seed production was 33%. Plant height was also significantly different ranging from 60.6 to 94.1 cm. Using morphological traits the accessions clustered into two major groups and two minor groups and variation among accessions were 10-61%. On the other hand, SSR marker-based dendrogram revealed five major and two minor groups. It showed that variation among the accessions was low, 10-20%. Heterozygosity was 0.52, total alleles produced were 410, and average allele per locus was 19.52. Six accessions, C3, C4, S5, W1, W3, and W5 fell in five different clusters in the SSR dendrogram and in six clusters in the morphomolecular based dendrogram. These accessions were noted for high capsule number per plant and seeds number per capsule and are recommended for consideration as potential parental lines for breeding programme for high yield.

scholarly journals Genetic diversity analysis of parental lines for hybrid development in rice (Oryza sativa L.)

2013 ◽  
Vol 37 (4) ◽  
pp. 617-624 ◽  
Author(s):  
MJ Hasan ◽  
Umma Kulsum ◽  
MMH Rahman ◽  
MMH Chowdhury ◽  
AZMKA Chowdhury
Keyword(s):  
Genetic Diversity ◽  
Oryza Sativa L ◽  
Principal Component ◽  
Mean Value ◽  
Cluster Distance ◽  
Parental Lines ◽  
Almost All ◽  
Yield Maximization ◽  
Hybrid Development ◽  
Panicle Weight

Genetic divergence of 40 parental lines comprising 30 restorer and 10 maintainer lines were studied through Mohalanobis's D2 and principal component analysis for eleven characters. Genotypes were grouped into five different clusters. Cluster V comprised maximum number of genotypes (thirteen) followed by cluster I and II. The inter-cluster distance was maximum between clusters I and V (13.495) indicating wide genetic diversity between these two clusters followed by the distance between cluster I and 11 (9.489), cluster IV, and cluster V (8.969) and cluster I and cluster III (8.039). The minimum inter-cluster distance was observed between cluster II and cluster III (3.034) followed by cluster 111 and cluster IV (3.834) and cluster II and cluster V (4.945) indicating that the genotypes of these clusters were genetically close. The intra cluster distance in the entire five clusters was more or less low which indicated that the genotypes within the same cluster were closely related. Among the characters panicle weight contributed most for divergence in the studied parental lines. Difference in cluster means existed for almost all the characters studied. Highest mean value for number of effective tillers (7.8), days to 50% flowering (95.5), panicles/m2 (192.6), panicle weight (2.9), spikelet fertility (84.8), number of grains/panicle (177.8), days to maturity (123.6), and grain yield/plot (1065.5) were observed in cluster I indicated the parental lines fallen in this cluster having the genetic potentiality to contribute better for yield maximization of hybrid rice. DOI: http://dx.doi.org/10.3329/bjar.v37i4.14386 Bangladesh J. Agril. Res. 37(4): 617-624, December 2012

Analisis Keragaman Genetik 28 Nomor Koleksi Kakao (Theobroma cacao L.) Berdasarkan Marka SSR

2017 ◽  
Vol 4 (1) ◽  
pp. 13 ◽  
Author(s):  
Ilham Nur ardhi Wicaksono ◽  
Rubiyo Rubiyo ◽  
Dewi Sukma ◽  
Sudarsono Sudarsono
Keyword(s):  
Genetic Diversity ◽  
Ssr Markers ◽  
Plant Molecular Biology ◽  
Average Value ◽  
Germplasm Collections ◽  
Ctab Method ◽  
Parental Lines ◽  
Biology Laboratory ◽  
Superior Clones ◽  
Selection Of

<em>Analysis of genetic diversity of cacao germplasm collections using molecular markers has an important role in the assembly of new superior clones. The availability of commercial and superior local clones could increase the success of new superior clones’ assembly. Hence, the genetic diversity analysis of these materials needs to be done. The study was aimed to analyze genetic diversity of 28 cacao collections based on SSR markers that would be useful for selection of parental lines. The research was conducted in the Integrated Laboratory, Indonesian Industrial and Beverage Crops Research Institute, Sukabumi, and Plant Molecular Biology laboratory, Bogor Agricultural University, from November 2015 to May 2016.</em> <em>Analysis of genetic diversity was conducted using 28 cacao clones (13 superior local clones and 15 commercial clones). DNA was extraction using CTAB method, which then amplified by PCR technique using 20 SSR primers. The result showed that all SSR markers used in this study were polymorphic with an average value of PIC was high (57%). Phylogenetic tree constructed using DARwin program version 6.05 is divided into 3 major groups, which placed commercial and superior local clones together in each group. Superior local clones observed herein might have close relationships with commercial clones that have long been cultivated in Indonesia. Furthermore, some cacao clones could potentially be parental lines because they had high genetic distance. The results showed that SSR markers are powerful tools to determine potential parental lines, which is expected to increase the chances of heterosis in their progenies.</em>

scholarly journals SSR Marker-Assisted Management of Parental Germplasm in Sugarcane (Saccharum spp. hybrids) Breeding Programs

Agronomy ◽  
2019 ◽  
Vol 9 (8) ◽  
pp. 449 ◽  
Author(s):  
Jiantao Wu ◽  
Qinnan Wang ◽  
Jing Xie ◽  
Yong-Bao Pan ◽  
Feng Zhou ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Capillary Electrophoresis ◽  
Population Structure ◽  
Ssr Markers ◽  
High Performance ◽  
Breeding Programs ◽  
Saccharum Spp ◽  
Parental Lines ◽  
Assisted Management ◽  
High Performance Capillary Electrophoresis

Sugarcane (Saccharum spp. hybrids) is an important sugar and bioenergy crop with a high aneuploidy, complex genomes and extreme heterozygosity. A good understanding of genetic diversity and population structure among sugarcane parental lines is a prerequisite for sugarcane improvement through breeding. In order to understand genetic characteristics of parental lines used in sugarcane breeding programs in China, 150 of the most popular accessions were analyzed with 21 fluorescence-labeled simple sequence repeats (SSR) markers and high-performance capillary electrophoresis (HPCE). A total of 226 SSR alleles of high-resolution capacity were identified. Among the series obtained from different origins, the YC-series, which contained eight unique alleles, had the highest genetic diversity. Based on the population structure analysis, the principal coordinate analysis (PCoA) and phylogenetic analysis, the 150 accessions were clustered into two distinct sub-populations (Pop1 and Pop2). Pop1 contained the majority of clones introduced to China (including 28/29 CP-series accessions) while accessions native to China clustered in Pop2. The analysis of molecular variance (AMOVA), fixation index (Fst) value and gene flow (Nm) value all indicated the very low genetic differentiation between the two groups. This study illustrated that fluorescence-labeled SSR markers combined with high-performance capillary electrophoresis (HPCE) could be a very useful tool for genotyping of the polyploidy sugarcane. The results provided valuable information for sugarcane breeders to better manage the parental germplasm, choose the best parents to cross, and produce the best progeny to evaluate and select for new cultivar(s).

Short Communication: Genetic variation of Coelogyne pandurate, C. rumphii and their hybrids based on RAPD markers

2020 ◽  
Vol 21 (10) ◽  
Author(s):  
Sri Hartati ◽  
ENDANG S. MULIAWATI
Keyword(s):  
Genetic Diversity ◽  
Genetic Variation ◽  
Rapd Markers ◽  
Short Communication ◽  
F1 Hybrids ◽  
Polymorphic Bands ◽  
Large Clusters

Abstract. Hartati S, Muliawati ES. 2020. Short Communication: Genetic variation of Coelogyne pandurata, C. rumphii and their hybrids based on RAPD markers. Biodiversitas 21: 4709-4713. One effort to increase the genetic diversity of orchids is by crossing. This research aims to assess the genetic variation of a hybrid orchid obtained by crossing Coelogyne pandurata and C. rumphii and their hybrids based on RAPD markers. In this research, both parents were analyzed in three replications, while the hybrid was done in 10 replications. The study was conducted by analyzing DNA bands using RAPD markers with six primers, i.e. OPA 02, OPA 07, OPA 13, OPB 12, OPB 17, and OPD 08. Identification of the parents and their F1 hybrids showed 95.83% polymorphic bands with 43 bands measuring 200-2100 bp. The parents of C. rumphii, C. pandurata, and their hybrids showed similarity range of 0.16-1.00. The crossing of C. rumphii and C. pandurata resulted in a similarity of 0.5, shown in two large clusters. The first cluster consisted only of C. pandurata males and the second cluster consisted of C. rumphii females, together with all hybrid individuals. This study succeeded in creating new hybrids of orchids that have different characters from their parents, having a genetic variation of 23%.

Combining Ability and Heritability of Resistance to Early and Late Leafspot of Peanut1

1986 ◽  
Vol 13 (1) ◽  
pp. 10-14 ◽  
Author(s):  
W. F. Anderson ◽  
J. C. Wynne ◽  
C. C. Green ◽  
M. K. Beute
Keyword(s):  
Combining Ability ◽  
Additive Genetic Variance ◽  
Rank Correlation ◽  
F1 Hybrids ◽  
Cercospora Arachidicola ◽  
F1 Hybrid ◽  
Detached Leaf ◽  
F2 Population ◽  
Parental Lines ◽  
High Level

Abstract Four parental lines with resistance to early leafspot caused by Cercospora arachidicola Hori and four parental lines with resistance to late leafspot caused by Cercosporidium personatum (Berk. & Curt.) Deighton and the F1 hybrid progeny from crosses between the two groups of parents were evaluated for resistance to both leafspot diseases in the greenhouse using a detached leaf technique. The subsequent F2 plants of all crosses were evaluated in the field for resistance to early leafspot in order to estimate combining ability effects for components of partial resistance and to identify parents useful in developing lines resistant to both diseases. General combining ability, attributed largely to additive genetic variance, accounted for the largest portion of the variability among the F1 and F2 generations for most parameters of resistance to both early and late leafspots. Reciprocal effects and heterosis toward the susceptible parents were also significant for parameters of resistance to the two pathogens. GP-NC 343 and FESR 5-P2-B1 were the best parents for incorporating genes for resistance to both early and late leafspots. Progenies of NC 17090 had a high level of resistance to late leafspot in detached leaf tests and progeny of PI 350680 had reduced defoliation from early leafspot in the field. Broad-sense heritabilities ranged from 0.2 to 0.4 for parameters of resistance to early leafspot estimated from the pooled variances of F2 plants of all crosses planted in the field. Parameters of resistance evaluated in the greenhouse for F1 hybrids were compared to parameters evaluated in the field for the F2 population by rank correlation of entry means. Latent period and sporulation of the fungus on detached leaves of F1 generation plants correlated (r = −0.46 and 0.54, respectively) with defoliation of F2 plants in the field.

scholarly journals Study of Heterosis, Combining Ability and Parental Diversity for Seed Cotton Yield and Contributing Traits using Diallel Data in Cotton (G. hirsutum L.)

2021 ◽  
Author(s):  
R.K. Giri ◽  
S.K. Verma ◽  
J.P. Yadav
Keyword(s):  
Combining Ability ◽  
Genetic Relatedness ◽  
Field Testing ◽  
F1 Hybrids ◽  
Jaccard Coefficient ◽  
Cotton Yield ◽  
Seed Cotton ◽  
Seed Cotton Yield ◽  
Parental Lines ◽  
The Relationship

Background: Combining ability and parental diversity contributes directly to improve the heterotic potential. The experiment was aimed to study the parental diversity and its contribution to heterosis and to get an idea if parental diversity has any influence on the combining ability of the parental lines.Methods: The field testing was carried out during 2017-18 at three locations comprises, Sirsa, Bathinda and Abohar. Total eight parents were crossed in diallel manner to produce 56 combination excluding eight parental genotypes using full diallel. All the hybrids and parental lines were tested using RBD at the selected locations and the mean of these three locations data was used to study the relationship. Genetic relatedness of the parents was studied using 20 SSR markers and the distance/similarity matrix was developed using Jaccard coefficient method. Result: Genotypes showed significant (p≤0.01) differences for mean squares values for all the traits under study. F-2228, F-2164 and LH-2108 were the parents with best general combining abilities. Parental lines RS-2013 and RST were found to be the most divergent lines. The best F1 hybrids such as RST-9 x F-2164, LH-2076 x RST-9 and LH-2076 x RS-2013 comprised of diverse parents produced high heterosis for seed cotton yield. Among all the traits under study the maximum heterosis was received for seed cotton yield with a max gain of 126.8% over the mid parent.

scholarly journals Heterosis, Combining Ability, Genetic Diversity and their Interrelationship in Pigeonpea [Cajanus cajan (L.) Millspaugh]

2021 ◽  
Author(s):  
D. Chandra ◽  
S.K. Verma ◽  
A.K. Gaur ◽  
C. Bisht ◽  
A. Gautam ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Combining Ability ◽  
High Frequency ◽  
Block Design ◽  
General Combining Ability ◽  
F1 Hybrids ◽  
Randomized Block Design ◽  
Degree Of Dominance ◽  
Correlation Result ◽  
Per Se

Background: The development of superior hybrids is must to break the existing yield plateau ( less than 800 kg/ha) in pigeonpea and hence, the genetic mechanism governing the heterosis in pigeonpea must be decoded. Methods: The present study was laid down using randomized block design during kharif 2018-19 at GBPUAT, Pantnagar with 36 genotypes (8 parents and 28 F1 hybrids) of pigeonpea. The estimates of combining ability were evaluated by using the Griffing’s, Method II, Model I. The observations recorded for yield and related traits were subjected to the estimation of genetic diversity (GD) using the D2 statistics. The correlation between heterosis and different parameters viz., parental mean (PM), specific combining ability (SCA), mean of general combining ability (MGCA) and genetic diversity (GD) were estimated by using Pearson’s correlation. Result: High estimates of SCA variance and more than unity ( greater than 1) average degree of dominance for all the characters indicated the presence of over dominance. The SCA followed by MGCA were found to be most reliable parameters to predict the heterosis. The parents having high x low or high x high per se performance, good x poor GCA effects and with medium genetic diversity resulted in high frequency of heterotic hybrids.

scholarly journals Genetic Diversity Analysis of Hybrid Rice Parental Lines and Genetic Purity Assessment of Hybrid Seeds of China

2020 ◽  
Vol 12 (5) ◽  
pp. 37
Author(s):  
Haiya Cai ◽  
Yuxia Lu ◽  
Gang Liu ◽  
Shuo Zhang ◽  
Haitao Jia ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Hybrid Rice ◽  
Southern China ◽  
Polymorphic Information Content ◽  
Diversity Analysis ◽  
Japonica Rice ◽  
Similarity Coefficients ◽  
Genetic Purity ◽  
Genetic Diversity Analysis ◽  
Parental Lines

Thirty-five pairs of SSR primers were used for genetic diversity analysis and DNA fingerprinting of 31 hybrid rice core parental lines developed in central- and southern-China using one japonica rice line and three inbred rice lines as the check varieties. The average number of alleles (Na) per SSR locus was 4.02, with a range of two to eight, the effective number of alleles (Ne) was 83.16 with a mean of 2.38, ranging from 1.19 to 4.66. The polymorphic information content (PIC) ranged from 0.16 to 0.79, with an average number of 0.52. The results of the cluster analysis indicated that the check varieties viz., one japonica rice and three inbred rice, were clustered into two groups with similarity coefficients of 0.62 and 0.71 respectively indicating their relatedness. Thirty-one hybrid rice parental lines were clustered into 6 groups according to their different types, pedigrees and regions of development with similarity coefficients of approximately 0.76. The highest genetic similarity coefficient (0.94) was observed between Y58S and C815S, and the lowest (0.63) was observed between Quan9311A and Peiai64S. The purity of one hybrid rice cultivar was tested using characteristic marker and the field test, and it was demonstrated that the purities obtained using the two methods were similar. This research will be helpful for rice breeding, new cultivar registration and seed production.

Sign in / Sign up

Export Citation Format

Share Document