Web Mining for Protein-to-Protein Interaction Information

2011 ◽  
pp. 279-308
Author(s):  
Hsi-Chieh Lee ◽  
Szu-Wei Huang ◽  
Eldon Y. Li
Keyword(s):  
User Interface ◽  
Protein Interaction ◽  
Protein Interactions ◽  
Web Mining ◽  
Search Space ◽  
The Internet ◽  
Mining System ◽  
Web Based ◽  
Search Mechanism ◽  
Job Dispatching

This study proposes a mining system for finding protein-to-protein interaction literatures from the databases on the Internet. In this system, we search for discriminating words for protein-to-protein interaction by way of statistics and the results from literatures. A threshold is also evaluated to check if a given literature is related to protein-to-protein interactions. In addition, a keypage-based search mechanism is used to find related papers for protein-to-protein interactions from a given document. To expand the search space and ensure better performance of the system, mechanisms for protein name identification and databases for protein names are also developed. The system is designed with a web-based user interface and a job-dispatching kernel. Experiments are conducted and the results have been checked by a biomedical expert. The experimental results indicate that by using the proposed mining system, it is helpful for researchers to find protein-to-protein literatures from the overwhelming pieces of information available on the biomedical databases over the Internet.

scholarly journals An Improved Method for Multi-Lingual News Feed Application

2019 ◽  
Vol 9 (1) ◽  
pp. 6758-6760
Keyword(s):  
User Interface ◽  
Web Application ◽  
New Technologies ◽  
National Language ◽  
The Internet ◽  
Improved Method ◽  
Daily News ◽  
Web Based ◽  
Local Newspaper ◽  
The Web

In the present era, the internet and new technologies are changing the information behavior of news reader .Instead of reading a copy of the local newspaper or watching the scheduledevening news, people increasingly turn to the internet for daily news updates. A Multi-Lingual news feed application is aimed at developing a web based application named multilingual news feed app. This Application deals with the user who wants to read news from the web application. User can select different countries in which a user is interested, the latest news will be fetched from the selected country. The news will be fetched and displayed based on the country selected in its own national language & the news is categorized into 7 different categories. A user can select any category which they are looking for. When you are done selecting the country & category, then the page will automatically refresh and the news will be displayed on MultiLingual news feed application. This application also supports translation and the news can be translated into any language. This application is fully responsive and has a good-looking user interface. The users will find this application much interesting for reading the news articles.

BUILDING A KNOWLEDGE BASE FOR IMPLEMENTING A WEB-BASED COMPUTERIZED RECOMMENDATION SYSTEM

2007 ◽  
Vol 16 (05) ◽  
pp. 793-828 ◽  
Author(s):  
JUAN D. VELÁSQUEZ ◽  
VASILE PALADE
Keyword(s):  
Knowledge Base ◽  
Web Site ◽  
Web Mining ◽  
Recommendation System ◽  
The Internet ◽  
Web Pages ◽  
Web Based ◽  
Web Logs ◽  
Mining Tools ◽  
The Web

Understanding the web user browsing behaviour in order to adapt a web site to the needs of a particular user represents a key issue for many commercial companies that do their business over the Internet. This paper presents the implementation of a Knowledge Base (KB) for building web-based computerized recommender systems. The Knowledge Base consists of a Pattern Repository that contains patterns extracted from web logs and web pages, by applying various web mining tools, and a Rule Repository containing rules that describe the use of discovered patterns for building navigation or web site modification recommendations. The paper also focuses on testing the effectiveness of the proposed online and offline recommendations. An ample real-world experiment is carried out on a web site of a bank.

Web Mining

2008 ◽  
pp. 684-689
Author(s):  
Henrik Hanke ◽  
Alf Neumann
Keyword(s):  
Web Sites ◽  
Political Development ◽  
Web Mining ◽  
Positive Impact ◽  
The Internet ◽  
Web Based ◽  
Complex Information ◽  
Intelligent Software ◽  
Intelligent Software Agents ◽  
Business To Business

The scale and scope of information on the Internet has been extended enormously over the past decade. The growth of more and more intelligent Web-based services and applications has resulted in an enormous growth of potentially useful data of both commercial and non-commercial interest. While this rise has brought a great amount of positive impact on global economic, social, and political development, it also implies an enormous flood of information into an increasingly complex information space. This is to be found on a vast variety of topics originating from a vast variety of sources, which range from private Web sites containing different kinds of information, to business-to-business B2B platforms. In most cases, these data are of an unsorted and unstructured kind, making efficient and target-oriented information retrieval very hard, if not nearly impossible. Coping with the challenge of a lack of transparency can be remedied by intelligent software agents, also referred to as softbots, which guide users through finding, sorting, and filtering this accruing data on the Internet like commonly used search engines.

scholarly journals PINAWeb: A web-based tool for the comparison of Protein-Protein Interaction Networks Aligners

2021 ◽  
Author(s):  
A. Alcalá ◽  
G. Riera ◽  
I. García ◽  
R. Alberich ◽  
M. Llabrés
Keyword(s):  
Protein Interaction ◽  
Protein Interactions ◽  
Protein Interaction Networks ◽  
Interaction Networks ◽  
Protein Protein Interactions ◽  
Considerable Effort ◽  
Web Based ◽  
Protein Protein Interaction ◽  
Protein Protein Interaction Networks ◽  
User Friendly

AbstractMotivationSeveral protein-protein interaction networks (PPIN) aligners have been developed during the last 15 years. One of their goals is to help the functional annotation of proteins and the prediction of protein-protein interactions. A correct aligner must preserve the network’s topology as well as the biological coherence. However, this is a trade-off that is hard to achieve. In addition, most aligners require a considerable effort to use in practice and many researchers must choose an aligner without the opportunity to previously compare the performance of different aligners.ResultsWe developed PINAWeb, a user-friendly web-based tool to obtain and compare the results produced by the aligners: AligNet, HubAlign, L-GRAAL, PINALOG and SPINAL. PPINs can be uploaded either from the STRING database or from a user database. The source code of PINAWeb is freely available on GitHub to enable researchers to add other aligners, network databases or alignment score metrics. In addition, PINAWeb provides a report with the analysis for every alignment in terms of topological and functional information scores, as well as the visualization of the alignments’ comparison (agreement/differences) when more than one aligner are considered.Availabilityhttps://bioinfo.uib.es/~recerca/PINAWeb

Framework for Teleoperation and Maintenance of an Industrial Robot

2006 ◽  
Vol 113 ◽  
pp. 313-318 ◽  
Author(s):  
Mikko Sallinen ◽  
Sakari Pieskä ◽  
Matti Annala ◽  
Yasushi Sumi ◽  
Jari Mäkelä
Keyword(s):  
User Interface ◽  
Industrial Robot ◽  
Rapid Change ◽  
Industrial Robots ◽  
The Internet ◽  
Web Based

In this paper, we present a framework for teleoperation and the maintenance of industrial robots. The idea of the framework is to provide a rapid change of products to be manufactured and safely monitor and carry out the maintenance remotely. Also, the goal of the work is to provide an easy-to-use HMI for user of the robot. Remote connection relies on the Internet that is nowadays easily available, cheap and includes a lot of existing components to be used. As an illustration of this framework we present a web-based user interface that enables the user to operate remotely to robot workcell with an industrial robot.

scholarly journals PPI layouts: BioJS components for the display of Protein-Protein Interactions

F1000Research ◽  
2014 ◽  
Vol 3 ◽  
pp. 50 ◽  
Author(s):  
Gustavo A. Salazar ◽  
Ayton Meintjes ◽  
Nicola Mulder
Keyword(s):  
Protein Interaction ◽  
Protein Interactions ◽  
Protein Interaction Networks ◽  
Interaction Networks ◽  
Third Party ◽  
Protein Protein Interactions ◽  
Web Based ◽  
Protein Protein Interaction ◽  
Link Type ◽  
Protein Protein Interaction Networks

Summary: We present two web-based components for the display of Protein-Protein Interaction networks using different self-organizing layout methods: force-directed and circular. These components conform to the BioJS standard and can be rendered in an HTML5-compliant browser without the need for third-party plugins. We provide examples of interaction networks and how the components can be used to visualize them, and refer to a more complex tool that uses these components. Availability: http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.7753

scholarly journals INTERNET-CORPORA FOR FINNO-UGRIC LANGUAGES OF RUSSIA

2019 ◽  
Vol 13 (3) ◽  
pp. 528-537 ◽  
Author(s):  
Timofei Aleksandrovich Arkhangelskii
Keyword(s):  
Social Media ◽  
User Interface ◽  
Corpus Linguistics ◽  
Development Process ◽  
Methodological Approach ◽  
The Internet ◽  
Web Based ◽  
Linguistic Research ◽  
The Social ◽  
Digital Language

Digital language corpora have long become one of the most important tools in linguistic research; a new methodological approach, known as corpus linguistics, has been based on corpora. While comprehensive corpora exist for the major European Uralic languages (Hungarian, Finnish, Estonian), the smaller Uralic languages of Russia did not have comparable resources until recently. In this paper, I present digital corpora recently developed for the largest Uralic languages of Russia: Udmurt, Komi-Zyrian, Meadow Mari, Erzya and Moksha. The corpora comprise digital texts available on the internet, which were collected and processed by the author. Two corpora were created for each language: a social media corpus and a non-social-media (“main”) corpus. Both kinds of texts were automatically morphologically analyzed; the social media texts were additionally filtered and anonymized. I will outline the development process of these corpora, as well as present their features and possible applications. All corpora described in the paper are equipped with a web-based user interface and are publicly available at http://volgakama.web-corpora.net/.

PENGELOLAAN DATA ANGGOTA BERBASIS WEBSITE DI YAMAHA VIXION CLUB CABANG BANDUNG

2020 ◽  
Vol 2 (2) ◽  
pp. 113-127
Author(s):  
Nova Indrayana Yusman
Keyword(s):  
Data Management ◽  
Organizational Structure ◽  
Human Resource Development ◽  
Human Resource ◽  
Programming Language ◽  
The Internet ◽  
Web Based ◽  
Management Software ◽  
The City ◽  
Data Management Software

Yamaha Vixion Club Bandung (YVCB) was formed on July 7, 2007 in the city of Bandung, as a place of friendship between Yamaha Vixion motorcyclists. In its organizational structure, YVCB has a Human Resource Development (HRD) division. Until now, there are more than 800 Yamaha Vixion Club Bandung members. This software is made to facilitate the work of the Yamaha Vixion Club Bandung HRD Division in processing member data. Created using Microsoft Webmatrix as an editor with the PHP programming language. The database uses MySQL with PHPMyAdmin as the software. The method used in making this software is prototyping so that between developers and customers can understand each other what the customer wants. The purpose of making web-based member data management software is that in terms of managing member data it can be done anytime and anywhere by just accessing the internet. In the use of the program, the author chose to use PHP, because PHP is the best and easiest to use in website programming language. Based on the last paragraph, the author intends to make aplication based computerized attendance so that become effective and efficient in terms of time.

Desain Dan Implementasi Web Smp Islam Ngebruk Menggunakan Php Dan Mysql

2017 ◽  
Vol 16 (2) ◽  
pp. 1
Author(s):  
Muchammad Ismail Hamzah
Keyword(s):  
High School ◽  
Programming Language ◽  
Junior High School ◽  
Information Delivery ◽  
The Internet ◽  
Web Based ◽  
Technological Advances ◽  
Bulletin Boards ◽  
Printing Machine ◽  
The Web

In accordance with the technological advances of web-based information delivery via the internet has more value, because the information can be delivered easily, quickly,  spacious and interactive. Because this way, information is simply inserted into the web and within seconds the information can be accessed globally.  Submission of this information has not been used in Ngebruk Islamic Junior High School, Sumberpucung District, Malang Regency. Submission of the information in these schools still use manual way, such as by mail, bulletin boards, or orally. Surely this way less effective and efficient, since it requires a lot of expenses such as the purchase of paper, printing machine and maintenance, ink, and its scope was limited to the scope of the school.To reduce the above problems, the delivery of information in this school need to use web media created with the PHP programming language and MySQL. PHP is a programming language that is used to allow users to process information on the web, while MySQL is the software used to store the information on the web. Once the web is run online, the school entered information to the web, can be accessed via intenet by anyone without the limited space and time

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