scholarly journals Rice Crop Disease Prediction Using Machine Learning Technique

2021 ◽  
Vol 12 (4) ◽  
pp. 1-15
Author(s):  
Bharati Patel ◽  
Aakanksha Sharaff
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Adaptive Learning ◽  
Large Scale ◽  
Prediction Models ◽  
Crop Yields ◽  
Learning Algorithm ◽  
Plant Phenotyping ◽  
Disease Prediction ◽  
Crop Disease

Crop yields are affected at large scale due to spread of unchecked diseases. The spread of these diseases is similar to the spreading of cancer in human body. But, unlike cancer these diseases can be identified at early stages through plant phenotyping traits analysis. In order to effectively identify these diseases, effective segmentation, feature extraction, feature selection and classification processes must be followed. Selection of the best combination for the given methods is very complex due to the presence of a large number of the aforementioned methods. Thereby disease prediction models are generally found to be ineffective. This paper proposes a highly effective machine learning-based formulation approach to select a proper classification process which improves the overall accuracy of crop disease detection with different dimensionality of plant dataset and included maximum features also. Hence, the proposed adaptive learning algorithm gives 99.2% accuracy compared to other techniques like Back-propagation Neural Network (BPNN), Convolutional Neural Network (CNN), and SVM.

scholarly journals Ensemble model for Heart Disease Prediction

2021 ◽  
Vol 1 (4) ◽  
pp. 268-280
Author(s):  
Bamanga Mahmud , , , Ahmad ◽  
Ahmadu Asabe Sandra ◽  
Musa Yusuf Malgwi ◽  
Dahiru I. Sajoh
Keyword(s):  
Machine Learning ◽  
Heart Disease ◽  
Prediction Model ◽  
Prediction Models ◽  
Learning Algorithm ◽  
Heart Diseases ◽  
Machine Learning Techniques ◽  
Disease Prediction ◽  
Ensemble Model ◽  
Prediction Probability

For the identification and prediction of different diseases, machine learning techniques are commonly used in clinical decision support systems. Since heart disease is the leading cause of death for both men and women around the world. Heart is one of the essential parts of human body, therefore, it is one of the most critical concerns in the medical domain, and several researchers have developed intelligent medical devices to support the systems and further to enhance the ability to diagnose and predict heart diseases. However, there are few studies that look at the capabilities of ensemble methods in developing a heart disease detection and prediction model. In this study, the researchers assessed that how to use ensemble model, which proposes a more stable performance than the use of base learning algorithm and these leads to better results than other heart disease prediction models. The University of California, Irvine (UCI) Machine Learning Repository archive was used to extract patient heart disease data records. To achieve the aim of this study, the researcher developed the meta-algorithm. The ensemble model is a superior solution in terms of high predictive accuracy and diagnostics output reliability, as per the results of the experiments. An ensemble heart disease prediction model is also presented in this work as a valuable, cost-effective, and timely predictive option with a user-friendly graphical user interface that is scalable and expandable. From the finding, the researcher suggests that Bagging is the best ensemble classifier to be adopted as the extended algorithm that has the high prediction probability score in the implementation of heart disease prediction.

Development of Rainfall Prediction Models Using Machine Learning Approaches for Different Agro-Climatic Zones

2021 ◽  
pp. 72-94
Author(s):  
Diwakar Naidu ◽  
Babita Majhi ◽  
Surendra Kumar Chandniha
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Large Scale ◽  
Prediction Models ◽  
Machine Learning Algorithms ◽  
Learning Approaches ◽  
Learning Models ◽  
Climatic Zones ◽  
Environmental Prediction ◽  
Machine Learning Models

This study focuses on modelling the changes in rainfall patterns in different agro-climatic zones due to climate change through statistical downscaling of large-scale climate variables using machine learning approaches. Potential of three machine learning algorithms, multilayer artificial neural network (MLANN), radial basis function neural network (RBFNN), and least square support vector machine (LS-SVM) have been investigated. The large-scale climate variable are obtained from National Centre for Environmental Prediction (NCEP) reanalysis product and used as predictors for model development. Proposed machine learning models are applied to generate projected time series of rainfall for the period 2021-2050 using the Hadley Centre coupled model (HadCM3) B2 emission scenario data as predictors. An increasing trend in anticipated rainfall is observed during 2021-2050 in all the ACZs of Chhattisgarh State. Among the machine learning models, RBFNN found as more feasible technique for modeling of monthly rainfall in this region.

scholarly journals Machine Learning for Integrating Social Determinants in Cardiovascular Disease Prediction Models: A Systematic Review

2020 ◽  
Author(s):  
Yuan Zhao ◽  
Erica P Wood ◽  
Nicholas Mirin ◽  
Rajesh Vedanthan ◽  
Stephanie H Cook ◽  
...  
Keyword(s):  
Machine Learning ◽  
Systematic Review ◽  
Cardiovascular Disease ◽  
Social Determinants ◽  
Prediction Models ◽  
Learning Algorithm ◽  
Machine Learning Algorithms ◽  
Complex Nature ◽  
Disease Prediction ◽  
Causal Pathway

Background: Cardiovascular disease (CVD) is the number one cause of death worldwide, and CVD burden is increasing in low-resource settings and for lower socioeconomic groups worldwide. Machine learning (ML) algorithms are rapidly being developed and incorporated into clinical practice for CVD prediction and treatment decisions. Significant opportunities for reducing death and disability from cardiovascular disease worldwide lie with addressing the social determinants of cardiovascular outcomes. We sought to review how social determinants of health (SDoH) and variables along their causal pathway are being included in ML algorithms in order to develop best practices for development of future machine learning algorithms that include social determinants. Methods: We conducted a systematic review using five databases (PubMed, Embase, Web of Science, IEEE Xplore and ACM Digital Library). We identified English language articles published from inception to April 10, 2020, which reported on the use of machine learning for cardiovascular disease prediction, that incorporated SDoH and related variables. We included studies that used data from any source or study type. Studies were excluded if they did not include the use of any machine learning algorithm, were developed for non-humans, the outcomes were bio-markers, mediators, surgery or medication of CVD, rehabilitation or mental health outcomes after CVD or cost-effective analysis of CVD, the manuscript was non-English, or was a review or meta-analysis. We also excluded articles presented at conferences as abstracts and the full texts were not obtainable. The study was registered with PROSPERO (CRD42020175466). Findings: Of 2870 articles identified, 96 were eligible for inclusion. Most studies that compared ML and regression showed increased performance of ML, and most studies that compared performance with or without SDoH/related variables showed increased performance with them. The most frequently included SDoH variables were race/ethnicity, income, education and marital status. Studies were largely from North America, Europe and China, limiting the diversity of included populations and variance in social determinants. Interpretation: Findings show that machine learning models, as well as SDoH and related variables, improve CVD prediction model performance. The limited variety of sources and data in studies emphasize that there is opportunity to include more SDoH variables, especially environmental ones, that are known CVD risk factors in machine learning CVD prediction models. Given their flexibility, ML may provide opportunity to incorporate and model the complex nature of social determinants. Such data should be recorded in electronic databases to enable their use.

Machine Learning in Agriculture

2018 ◽  
Vol 8 (6) ◽  
pp. 26 ◽  
Author(s):  
Matthew N. O. Sadiku ◽  
Chandra M. M Kotteti ◽  
Sarhan M. Musa
Keyword(s):  
Climate Change ◽  
Artificial Intelligence ◽  
Machine Learning ◽  
Disease Diagnosis ◽  
Automated Detection ◽  
Disease Prediction ◽  
Paper Briefly ◽  
Agriculture Sector ◽  
Modern Agriculture ◽  
Crop Disease

Machine learning is an emerging field of artificial intelligence which can be applied to the agriculture sector. It refers to the automated detection of meaningful patterns in a given data.  Modern agriculture seeks ways to conserve water, use nutrients and energy more efficiently, and adapt to climate change.  Machine learning in agriculture allows for more accurate disease diagnosis and crop disease prediction. This paper briefly introduces what machine learning can do in the agriculture sector.

Adsorption Isotherm Predictions for Multiple Molecules in MOFs Using the Same Deep Learning Model

2019 ◽  
Author(s):  
Ryther Anderson ◽  
Achay Biong ◽  
Diego Gómez-Gualdrón
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Molecular Simulation ◽  
Large Scale ◽  
Learning Model ◽  
Operating Conditions ◽  
Small Subset ◽  
Screening Methods ◽  
Large Set ◽  
Metal Organic

<div>Tailoring the structure and chemistry of metal-organic frameworks (MOFs) enables the manipulation of their adsorption properties to suit specific energy and environmental applications. As there are millions of possible MOFs (with tens of thousands already synthesized), molecular simulation, such as grand canonical Monte Carlo (GCMC), has frequently been used to rapidly evaluate the adsorption performance of a large set of MOFs. This allows subsequent experiments to focus only on a small subset of the most promising MOFs. In many instances, however, even molecular simulation becomes prohibitively time consuming, underscoring the need for alternative screening methods, such as machine learning, to precede molecular simulation efforts. In this study, as a proof of concept, we trained a neural network as the first example of a machine learning model capable of predicting full adsorption isotherms of different molecules not included in the training of the model. To achieve this, we trained our neural network only on alchemical species, represented only by their geometry and force field parameters, and used this neural network to predict the loadings of real adsorbates. We focused on predicting room temperature adsorption of small (one- and two-atom) molecules relevant to chemical separations. Namely, argon, krypton, xenon, methane, ethane, and nitrogen. However, we also observed surprisingly promising predictions for more complex molecules, whose properties are outside the range spanned by the alchemical adsorbates. Prediction accuracies suitable for large-scale screening were achieved using simple MOF (e.g. geometric properties and chemical moieties), and adsorbate (e.g. forcefield parameters and geometry) descriptors. Our results illustrate a new philosophy of training that opens the path towards development of machine learning models that can predict the adsorption loading of any new adsorbate at any new operating conditions in any new MOF.</div>

scholarly journals Unraveling the deep learning gearbox in optical coherence tomography image segmentation towards explainable artificial intelligence

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Peter M. Maloca ◽  
Philipp L. Müller ◽  
Aaron Y. Lee ◽  
Adnan Tufail ◽  
Konstantinos Balaskas ◽  
...  
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Optical Coherence Tomography ◽  
Image Segmentation ◽  
Convolutional Neural Network ◽  
Learning Algorithm ◽  
Ground Truth ◽  
Optical Coherence Tomography Image ◽  
Optical Coherence ◽  
Tomography Image

AbstractMachine learning has greatly facilitated the analysis of medical data, while the internal operations usually remain intransparent. To better comprehend these opaque procedures, a convolutional neural network for optical coherence tomography image segmentation was enhanced with a Traceable Relevance Explainability (T-REX) technique. The proposed application was based on three components: ground truth generation by multiple graders, calculation of Hamming distances among graders and the machine learning algorithm, as well as a smart data visualization (‘neural recording’). An overall average variability of 1.75% between the human graders and the algorithm was found, slightly minor to 2.02% among human graders. The ambiguity in ground truth had noteworthy impact on machine learning results, which could be visualized. The convolutional neural network balanced between graders and allowed for modifiable predictions dependent on the compartment. Using the proposed T-REX setup, machine learning processes could be rendered more transparent and understandable, possibly leading to optimized applications.

57 Precision neoantigen discovery using novel algorithms and expanded HLA-ligandome datasets

2020 ◽  
Vol 8 (Suppl 3) ◽  
pp. A62-A62
Author(s):  
Dattatreya Mellacheruvu ◽  
Rachel Pyke ◽  
Charles Abbott ◽  
Nick Phillips ◽  
Sejal Desai ◽  
...  
Keyword(s):  
Machine Learning ◽  
Cell Lines ◽  
Antigen Processing ◽  
Large Scale ◽  
Prediction Models ◽  
K562 Cells ◽  
Machine Learning Algorithms ◽  
Training Data ◽  
High Quality ◽  
Tissue Samples

BackgroundAccurately identified neoantigens can be effective therapeutic agents in both adjuvant and neoadjuvant settings. A key challenge for neoantigen discovery has been the availability of accurate prediction models for MHC peptide presentation. We have shown previously that our proprietary model based on (i) large-scale, in-house mono-allelic data, (ii) custom features that model antigen processing, and (iii) advanced machine learning algorithms has strong performance. We have extended upon our work by systematically integrating large quantities of high-quality, publicly available data, implementing new modelling algorithms, and rigorously testing our models. These extensions lead to substantial improvements in performance and generalizability. Our algorithm, named Systematic HLA Epitope Ranking Pan Algorithm (SHERPA™), is integrated into the ImmunoID NeXT Platform®, our immuno-genomics and transcriptomics platform specifically designed to enable the development of immunotherapies.MethodsIn-house immunopeptidomic data was generated using stably transfected HLA-null K562 cells lines that express a single HLA allele of interest, followed by immunoprecipitation using W6/32 antibody and LC-MS/MS. Public immunopeptidomics data was downloaded from repositories such as MassIVE and processed uniformly using in-house pipelines to generate peptide lists filtered at 1% false discovery rate. Other metrics (features) were either extracted from source data or generated internally by re-processing samples utilizing the ImmunoID NeXT Platform.ResultsWe have generated large-scale and high-quality immunopeptidomics data by using approximately 60 mono-allelic cell lines that unambiguously assign peptides to their presenting alleles to create our primary models. Briefly, our primary ‘binding’ algorithm models MHC-peptide binding using peptide and binding pockets while our primary ‘presentation’ model uses additional features to model antigen processing and presentation. Both primary models have significantly higher precision across all recall values in multiple test data sets, including mono-allelic cell lines and multi-allelic tissue samples. To further improve the performance of our model, we expanded the diversity of our training set using high-quality, publicly available mono-allelic immunopeptidomics data. Furthermore, multi-allelic data was integrated by resolving peptide-to-allele mappings using our primary models. We then trained a new model using the expanded training data and a new composite machine learning architecture. The resulting secondary model further improves performance and generalizability across several tissue samples.ConclusionsImproving technologies for neoantigen discovery is critical for many therapeutic applications, including personalized neoantigen vaccines, and neoantigen-based biomarkers for immunotherapies. Our new and improved algorithm (SHERPA) has significantly higher performance compared to a state-of-the-art public algorithm and furthers this objective.

Adaptive Learning Algorithm for Cerebellar Model Articulation Controller: Neural Network Based Hybrid-Type Controller—Part I

2000 ◽  
Author(s):  
Magdy Mohamed Abdelhameed ◽  
Sabri Cetinkunt
Keyword(s):  
Neural Network ◽  
Control System ◽  
Adaptive Learning ◽  
Learning Algorithm ◽  
Cerebellar Model Articulation Controller ◽  
Neural Network Learning ◽  
Network Learning ◽  
Hybrid Type ◽  
Cmac Neural Network ◽  
Learning Technique

Abstract Cerebellar model articulation controller (CMAC) is a useful neural network learning technique. It was developed two decades ago but yet lacks an adequate learning algorithm, especially when it is used in a hybrid- type controller. This work is intended to introduce a simulation study for examining the performance of a hybrid-type control system based on the conventional learning algorithm of CMAC neural network. This study showed that the control system is unstable. Then a new adaptive learning algorithm of a CMAC based hybrid- type controller is proposed. The main features of the proposed learning algorithm, as well as the effects of the newly introduced parameters of this algorithm have been studied extensively via simulation case studies. The simulation results showed that the proposed learning algorithm is a robust in stabilizing the control system. Also, this proposed learning algorithm preserved all the known advantages of the CMAC neural network. Part II of this work is dedicated to validate the effectiveness of the proposed CMAC learning algorithm experimentally.

45 Application of Machine Learning Models to Thermal Burn Patient Outcome Predictions in the Aftermath of a Nuclear Event

2021 ◽  
Vol 42 (Supplement_1) ◽  
pp. S33-S34
Author(s):  
Morgan A Taylor ◽  
Randy D Kearns ◽  
Jeffrey E Carter ◽  
Mark H Ebell ◽  
Curt A Harris
Keyword(s):  
Machine Learning ◽  
Logistic Regression ◽  
Length Of Stay ◽  
Regression Models ◽  
Large Scale ◽  
Prediction Models ◽  
Burn Patients ◽  
Thermal Burn ◽  
Logistic Regression Models ◽  
Burn Patient

Abstract Introduction A nuclear disaster would generate an unprecedented volume of thermal burn patients from the explosion and subsequent mass fires (Figure 1). Prediction models characterizing outcomes for these patients may better equip healthcare providers and other responders to manage large scale nuclear events. Logistic regression models have traditionally been employed to develop prediction scores for mortality of all burn patients. However, other healthcare disciplines have increasingly transitioned to machine learning (ML) models, which are automatically generated and continually improved, potentially increasing predictive accuracy. Preliminary research suggests ML models can predict burn patient mortality more accurately than commonly used prediction scores. The purpose of this study is to examine the efficacy of various ML methods in assessing thermal burn patient mortality and length of stay in burn centers. Methods This retrospective study identified patients with fire/flame burn etiologies in the National Burn Repository between the years 2009 – 2018. Patients were randomly partitioned into a 67%/33% split for training and validation. A random forest model (RF) and an artificial neural network (ANN) were then constructed for each outcome, mortality and length of stay. These models were then compared to logistic regression models and previously developed prediction tools with similar outcomes using a combination of classification and regression metrics. Results During the study period, 82,404 burn patients with a thermal etiology were identified in the analysis. The ANN models will likely tend to overfit the data, which can be resolved by ending the model training early or adding additional regularization parameters. Further exploration of the advantages and limitations of these models is forthcoming as metric analyses become available. Conclusions In this proof-of-concept study, we anticipate that at least one ML model will predict the targeted outcomes of thermal burn patient mortality and length of stay as judged by the fidelity with which it matches the logistic regression analysis. These advancements can then help disaster preparedness programs consider resource limitations during catastrophic incidents resulting in burn injuries.

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