Effect of the Environment Factors on KGM Molecular Dimension

2011 ◽  
Vol 52-54 ◽  
pp. 1336-1339
Author(s):  
Chao Wang ◽  
Mei Xu ◽  
Yu Peng Zhu ◽  
Yu Qiao ◽  
Lin Lin Cai

In this paper, the effect of environment factors on KGM molecular dimension was discussed, such as ultrasonic, enzyme, concentration and temperature. The KGM polarity, molecular weight (Mw) and conformation were analyzed by digital polarimeter and LLS. The result indicated that the polarity change influenced by temperature and ultrasonic accorded with linear function equation. Mw of KGM gradually decreased with ultrasonic time and concentration of enzyme increase. The concentration of KGM was lower, the effect was more obviously. The changes of KGM Mw also brought regular change of molecular conformation. All offers the reference to reliabletheoretical foundations on controlling KGM molecular dimension and industrial application in exploiting KGM potential function and activity.

Polymers ◽  
2021 ◽  
Vol 13 (14) ◽  
pp. 2243
Author(s):  
Jiali Qu ◽  
Yi Gao ◽  
Wantai Yang

In this paper, we developed a reactive molecular dynamics (RMD) scheme to simulate the Self-Stable Precipitation (SP) polymerization of 1-pentene and cyclopentene (C5) with maleic anhydride (MAn) in an all-atom resolution. We studied the chain propagation mechanism by tracking the changes in molecular conformation and analyzing end-to-end distance and radius of gyration. The results show that the main reason of chain termination in the reaction process was due to intramolecular cyclic entanglement, which made the active center wrapped in the center of the globular chain. After conducting the experiment in the same condition with the simulation, we found that the distribution trend and peak value of the molecular-weight-distribution curve in the simulation were consistent with experimental results. The simulated number average molecular weight (Mn) and weight average molecular weight (Mw) were in good agreement with the experiment. Moreover, the simulated molecular polydispersity index (PDI) for cyclopentene reaction with maleic anhydride was accurate, differing by 0.04 from the experimental value. These show that this model is suitable for C5–maleic anhydride self-stable precipitation polymerization and is expected to be used as a molecular weight prediction tool for other maleic anhydride self-stable precipitation polymerization system.


1975 ◽  
Vol 28 (1) ◽  
pp. 189 ◽  
Author(s):  
RA Shanks

Gel permeation columns of Bio Beads S-X8 have been used to provide separation of oligomers and other small organic molecules. Results show successful separations up to molecular weight c. 600. The retention times of compounds have been correlated with the largest molecular dimension of the molecules and also with molar volumes.


2011 ◽  
Vol 52-54 ◽  
pp. 1344-1347
Author(s):  
Chao Wang ◽  
Yu Peng Zhu ◽  
Mei Xu ◽  
Dong Sheng Li ◽  
Hong Xia Huang

In this paper, the relativity on the granularity with different mesh of konjac glucomannan (KGM) and molecular dimension was discussed. Laser particle size analyzer, laser light scattering and digital polarimeter were used to analyze the granularity distribution, molecular characteristics and polarity of KGM. The results showed that the granularity of KGM after gradient refining was gradually decreased and KGM was well dispersed in ethanol(D50=13.11μm).The Mw of KGM was gradually decreased with its granularity decrease and its molecular conformation was from globular to linear structure. The space asymmetry of KGM at 80-100 meshes was minimum and its polarity was maximum. The primary establishment on the relativity offered the references to KGM theoretical research and practical application.


1988 ◽  
Vol 55 (4) ◽  
pp. 521-528 ◽  
Author(s):  
Douglas G. Dalgleish

SummaryA detailed calculation of the growth of molecular weight during the renneting of milk is given, based on a first-order breakdown of κ-casein followed by development of instability caused either by a decrease in the intermicellar repulsive potential or by the formation of holes in the stabilizing surface layer of the micelles. Unlike most of the models which have been described, this model allows a complete analytical solution. The solution is, however, complex and difficult to use simply, although it is shown that the calculations are in accord with experimental observations of the dependence of the coagulation process upon the enzyme concentration and the concentration of the milk. The calculations are also compared with those from other models of the reaction.


Blood ◽  
2008 ◽  
Vol 112 (11) ◽  
pp. 2017-2017
Author(s):  
Martine Marie Fiore ◽  
Ian J Mackie

Abstract Heparins which contain both a specific pentasaccharide sequence and a protease binding site accelerate antithrombin inactivation of both thrombin and factor Xa (fXa). The bridging effect due to binding of AT and protease to heparin-which is dominating for thrombin- also participates in fXa inhibition. To address the hypothesis that the calcium-dependent bridging effect by heparin is an essential contributor of protease inhibition, we compared the ability of the heparin-neutralizing agent Platelet Factor 4 (PF4) to inhibit various therapeutic low-molecular-weight heparins (LMWH) in a kinetic assay. LMWH were in order of increasing chain-length; Bemiparin, Enoxaparin, Dalteparin and Tinzaparin. As a reference, the activity of the pentasaccharide Fondaparinux was included. Upon neutralization by PF4, the second-order rate constant describing AT inactivation of fXa by LMWH was 4-fold higher for the pentasaccharide (k2 = 3.8 x 105 M−1 s−1) vs the longer chain LMWH Tinzaparin (k2 = 1.0 x 105 M−1 s−1) and about 2-fold higher for the short-chain Bemiparin ( k2 = 2.4 x 105 M−1 s−1) vs Tinzaparin, in agreement with reports showing higher anti-fXa peak for administered short-chain LMWH. These results could be explained by neutralization coefficients by PF4 and apparent affinities of PF4 for various LMWH which increased with molecular weight, indicating a relationship between the affinity of PF4 for heparin and its neutralizing capacity. The molecular weight-enhanced neutralization was also reminiscent of earlier observations that PF4 binding to heparin followed the same chain length requirement as binding of protease. In contrast to PF4, protamine sulphate fully neutralized LMWH in a non-specific manner and EDTA, abolished the calcium-dependent acceleration of the fXa-AT reaction, indicating that the bridging mechanism contributed to LMWH activity. In fact, as LMWH (Dalteparin) concentration was increased (0.05-0.8 U/ml), neutralization by PF4 decreased from 100 % to 35 %, a consequence of the template cofactor mechanism by heparin. Within a low range of LMWH concentration (<0.2 U/ml), excess AT over PF4 (4:1) had no effect on PF4 activity, indicating that PF4 and AT binding to LMWH were independent of each other. Instead, increasing enzyme concentration reversed the negative effect of heparin-bound AT on neutralization. Indeed, neutralization by PF4 of the fXa-AT reaction increased from 5 % to 55 % using fXa concentrations varying from 1 to 10 nM while neutralization of the thrombin-AT reaction required thrombin concentrations varying from 0.2 nM to 1.5 nM to obtain a similar level of neutralization than in the fXa-AT reaction. This was corroborated by saturation plots by PF4 which showed an increased apparent affinity of PF4 for LMWH as the enzyme concentration was increased in both fXa-AT and thrombin- AT reactions, although lower concentrations of thrombin were required to enhance PF4 affinity. Altogether the results suggested that heparin mediated an interaction of PF4 with protease which was of higher affinity in the presence of thrombin. Therefore, PF4 contributes to LMWH pharmacokinetics by specifically targeting the bridging function of heparin (via enzyme-PF4 interference of enzyme-AT interaction) and participates in the antifXa dependence of LMWH that remains after a major effect on the antithrombin activity.


1972 ◽  
Vol 126 (2) ◽  
pp. 361-379 ◽  
Author(s):  
K. A. Cammack ◽  
D. I. Marlborough ◽  
D. S. Miller

1. l-Asparaginases from Erwinia carotovora and Escherichia coli (EC2 enzyme) are both capable of inhibiting and eliminating certain types of tumour cells. The Er. carotovora enzyme is a more basic protein, however, and in contrast with the EC2 enzyme it contains neither tryptophan nor cystine, and disulphide bonds are therefore absent. The molecule is very stable in solution from pH3.0 to about pH12.0, and is somewhat more stable at alkaline pH than is the Esch. coli enzyme. Calculations based on a s020,w 7.43S and a sedimentation-equilibrium molecular weight of 135000±10000 give a frictional ratio (f/f0) of 1.08. The molecular conformation is therefore very compact in solution, and the electron microscope shows the negatively stained molecules as almost spherical particles with a diameter of 7.2±0.7nm. 2. Sedimentation-velocity and equilibrium ultracentrifugation, in 5–8m solutions of urea and guanidinium chloride, and also electrophoresis in sodium dodecyl sulphate–polyacrylamide gel, reveal a dissociation of the native protein molecule into four subunits of similar molecular weight in the range 32500–38000. The enzymically inactive subunits can be physically reassembled into an active tetramer when urea is removed by dialysis. Although the subunit structures of the Er. carotovora enzyme and the Esch. coli enzyme molecules are similar, the secondary bonding forces holding the subunits together in the tetramer are somewhat stronger in the Er. carotovora enzyme. 3. The optical-rotatory-dispersion (o.r.d.) parameters that characterize the Cotton effects arising from ordered structure in the molecule are [m′]233=−3522±74° and [m′]200=9096±1700°. These show very marked changes as the secondary structure is disrupted and the molecule dissociates into subunits. A correlation pathway was traced on the basis of o.r.d. parameters and enzyme activity as the polypeptide chains were denatured and renatured (and reconstituted) into active molecules after the dilution of solutions in urea. Subunits resulting from treatment with sodium dodecyl sulphate do not show the typically disordered o.r.d. profile, but nevertheless they are inactive.


2015 ◽  
Vol 2015 ◽  
pp. 1-9 ◽  
Author(s):  
N. Ugur Kaya ◽  
Y. Avcibasi Guvenilir

Poly(ε-caprolactone) (PCL) macromonomers comprising acrylate end-functionality were synthesized via enzymatic ring-opening polymerization (eROP) by utilizing commercially availableCandida antarcticaLipase B (CALB), Novozyme-435. 2-Hydroxyethyl methacrylate (HEMA) was purposed to be the nucleophilic initiator in eROP. The side reactions generated due to the cleavage of ester bonds in HEMA and the growing polymer chains were investigated through altering polymerization period, initiator concentration, temperature, and enzyme concentration.1H NMR evaluations showed that minimum quantities of side reactions were in lower temperatures, initiator concentration, enzyme concentration, and lower monomer conversions. Gel permeation chromatography (GPC) results revealed that lower polydispersity along with number-average molecular weight of end-functionalized PCL macromonomers was obtained depending on higher initiator/monomer ratios, lower temperature (60°C), enzyme concentration (100 mg), and/or polymerization time (2 h). Furthermore, 0.1 HEMA/ε-caprolactone (CL) ratio had higher molecular weight than 0.5 HEMA/CL ratio, while keeping a close value of methacrylate transfer, total methacrylate end-groups, and lower polyester transfer.


2011 ◽  
Vol 689 ◽  
pp. 308-314
Author(s):  
Xiao Yan Long ◽  
Xue Gang Luo ◽  
Ju Bai ◽  
Jia Feng Zhu

The environmental factors of mannanase konjac glucomannan (KGM) have been investigated in aqueous solution. Molecular weight (Mw) and molecular weight distribution (WMD) of the degraded KGM were measured by GPC. During the degradation process, the molecular weight of the enzymatic products decreases with reaction time, degradation reaction combining two reactions processed with different orders, while WMD broadens at first and then becomes narrow. The reduction of molecular dimension of KGM was lowered with temperature increase, but WMD increases. WMD was reduced with concentration of enzyme increase, but the reduction of molecular dimension of KGM was insignificant in the range of 2.0~6.5 u.mL-1of mannanase concentration. The results show that molecular dimension of KGM could be controlled by soft changes of reaction environment, dimension of KGM molecule could be decreased more than 100 times so as to obtain oligosaccharides, which offers the reference to reliable theoretical foundations and practical ground in exploiting KGM potential function and activity.


Sign in / Sign up

Export Citation Format

Share Document