The importance of static and dynamic head drivers for hyporheic exchange: evaluation of a spectral modelling approach

2020 ◽  
Author(s):  
Ida Morén ◽  
Joakim Riml ◽  
Anders Wörman
Keyword(s):  
Field Survey ◽  
Spatial Scales ◽  
Tracer Tests ◽  
Hydraulic Head ◽  
Spectral Model ◽  
Hyporheic Exchange ◽  
Model Parameters ◽  
Relative Importance ◽  
Wide Range ◽  
Static Head

<p>Groundwater surface water interactions can greatly impact the ecohydrology on a wide range of spatial scales, ranging from biogeochemical reactions under local bedforms to alteration of regional groundwater discharge patterns. Hyporheic exchange fluxes (HEF) are controlled by the streambed geology and driven by hydraulic head fluctuations at the stream bottom, consisting of a static and a dynamic part. Currently, few studies have investigated the relative importance of these two drivers of HEF in the field, which hinder a holistic understanding of the governing processes and may affect predictions of hyporheic exchange intensities.</p><p>This study is based on an extensive field survey of 9 stream reaches located in small, pristine streams in Sweden, with varying hydromorphological characteristics such as slope, bottom material, morphological complexity and stream discharge. The field survey included distributed measurements of the hydraulic head and the hydraulic conductivity along the streambed, as well as tracer tests with Rhodamine WT. The overall aim of the study was to evaluate the relative importance of HEF driven by dynamic and static head fluctuations in streams by usage of a spectral model that decomposes the observed hydraulic head fluctuations on distinctive spatial scales. As a validation, the advective storage path (ASP) transport model was calibrated against the conducted in-stream tracer tests and its parameters compared to the equivalent gained from the spectral model.</p><p>The results showed that the average exchange velocity evaluated by the two models were comparable in most observed cases, validating the usage of the spectral model in small alluvial streams with high slope, and low discharge and stream depth. However, a sensitivity analysis of the two models revealed some degree of equifinality for some of the independent model parameters. Detailed results from the spectral model indicated that the static head was dominating the HEF in all reaches, both on average and when distributed over separate spatial scales. Uncertainty in the results was found, predominantly effecting calculations of the dynamic HEF and connected to (1) the approximation of streambed topography at spatial scales <0.5 m, where the dynamic exchange is assumed to dominate and (2) the use of Fehlman’s constant for estimating the hydrodynamic exchange under complex streambed topographies. Despite those uncertainties, the spectral model approach gives a deeper understanding of the phenomena of HEF by incorporating its multiscale nature and illustrating the fact that static and dynamic drivers might be equally important, only acting on different scales.</p>

Role of topology in bioenergetics of sodium transport in complex epithelia

1986 ◽  
Vol 250 (6) ◽  
pp. F1107-F1118
Author(s):  
E. G. Huf ◽  
D. C. Mikulecky
Keyword(s):  
Sodium Transport ◽  
Frog Skin ◽  
Transport Model ◽  
Transport Rate ◽  
Model Parameters ◽  
Toad Urinary Bladder ◽  
Coupling Coefficients ◽  
High Sodium ◽  
Wide Range ◽  
Static Head

There has been some controversy as to whether in sodium-transporting epithelia (e.g., frog skin, toad urinary bladder) the Na-O2 ratio is independent of the net rate of transepithelial sodium transport or remains constant over a wide range of transport rates. This computer simulation study shows that both views are defensible, depending on whether one wishes to exclude or include “static head” energy in the calculations. This energy arises from intramembrane sodium recirculation, as shown here when applying a multicompartment epithelial membrane model. Assuming reasonable kinetic parameters of a transport model whose sodium transport rate is varied over a wide range by a step-by-step simulated amiloride action, the computations have shown the following. When static head energy (O2 consumption) is excluded from the calculations, the Na-O2 ratio is constant over a wide range of transepithelial sodium flux, up to the tested value of 20 neq X cm-2 X min-1, a “normal” value found in frog skin. The Na-O2 ratios were 19.4 and 28.7 in low- and high-sodium models, respectively. If the static head energy is included in the calculations, the Na-O2 ratios increase with increasing transport rate from zero values to values up to 15.7. These data are in good agreement with laboratory results, as are derived data on phenomenological coefficients and thermodynamic coupling coefficients (LNa = 80, 128; LNa,r = 4.4; Lr = 0.27, 0.58; q = 0.50, 0.90, depending on the chosen model parameters).

scholarly journals Inferring Linkage Disequilibrium Between a Polymorphic Marker Locus and a Trait Locus in Natural Populations

Genetics ◽  
2000 ◽  
Vol 156 (1) ◽  
pp. 457-467 ◽  
Author(s):  
Z W Luo ◽  
S H Tao ◽  
Z-B Zeng
Keyword(s):  
Linkage Disequilibrium ◽  
Allele Frequency ◽  
Random Mating ◽  
Natural Populations ◽  
Polymorphic Marker ◽  
Marker Locus ◽  
Model Parameters ◽  
Phenotypic Variance ◽  
Wide Range ◽  
Trait Locus

Abstract Three approaches are proposed in this study for detecting or estimating linkage disequilibrium between a polymorphic marker locus and a locus affecting quantitative genetic variation using the sample from random mating populations. It is shown that the disequilibrium over a wide range of circumstances may be detected with a power of 80% by using phenotypic records and marker genotypes of a few hundred individuals. Comparison of ANOVA and regression methods in this article to the transmission disequilibrium test (TDT) shows that, given the genetic variance explained by the trait locus, the power of TDT depends on the trait allele frequency, whereas the power of ANOVA and regression analyses is relatively independent from the allelic frequency. The TDT method is more powerful when the trait allele frequency is low, but much less powerful when it is high. The likelihood analysis provides reliable estimation of the model parameters when the QTL variance is at least 10% of the phenotypic variance and the sample size of a few hundred is used. Potential use of these estimates in mapping the trait locus is also discussed.

scholarly journals On the generation of internal waves by river plumes in subcritical initial conditions

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
R. Mendes ◽  
J. C. B. da Silva ◽  
J. M. Magalhaes ◽  
B. St-Denis ◽  
D. Bourgault ◽  
...  
Keyword(s):  
Numerical Modeling ◽  
Internal Waves ◽  
Coastal Waters ◽  
Initial Conditions ◽  
Spatial Scales ◽  
River Plumes ◽  
Wide Range ◽  
Near Shore ◽  
Generation Mechanisms ◽  
Douro River

AbstractInternal waves (IWs) in the ocean span across a wide range of time and spatial scales and are now acknowledged as important sources of turbulence and mixing, with the largest observations having 200 m in amplitude and vertical velocities close to 0.5 m s−1. Their origin is mostly tidal, but an increasing number of non-tidal generation mechanisms have also been observed. For instance, river plumes provide horizontally propagating density fronts, which were observed to generate IWs when transitioning from supercritical to subcritical flow. In this study, satellite imagery and autonomous underwater measurements are combined with numerical modeling to investigate IW generation from an initial subcritical density front originating at the Douro River plume (western Iberian coast). These unprecedented results may have important implications in near-shore dynamics since that suggest that rivers of moderate flow may play an important role in IW generation between fresh riverine and coastal waters.

scholarly journals Antifungal Activity of Propyl Disulfide from Neem (Azadirachta indica) in Vapor and Agar Diffusion Assays against Anthracnose Pathogens (Colletotrichum gloeosporioides and Colletotrichum acutatum) in Mango Fruit

2021 ◽  
Vol 9 (4) ◽  
pp. 839
Author(s):  
Muhammad Rafiullah Khan ◽  
Vanee Chonhenchob ◽  
Chongxing Huang ◽  
Panitee Suwanamornlert
Keyword(s):  
Antifungal Activity ◽  
Mycelial Growth ◽  
Colletotrichum Gloeosporioides ◽  
Colletotrichum Acutatum ◽  
Model Parameters ◽  
Pathogenicity Test ◽  
Agar Diffusion ◽  
Wide Range ◽  
Significant Difference ◽  
Diffusion Assay

Microorganisms causing anthracnose diseases have a medium to a high level of resistance to the existing fungicides. This study aimed to investigate neem plant extract (propyl disulfide, PD) as an alternative to the current fungicides against mango’s anthracnose. Microorganisms were isolated from decayed mango and identified as Colletotrichum gloeosporioides and Colletotrichum acutatum. Next, a pathogenicity test was conducted and after fulfilling Koch’s postulates, fungi were reisolated from these symptomatic fruits and we thus obtained pure cultures. Then, different concentrations of PD were used against these fungi in vapor and agar diffusion assays. Ethanol and distilled water were served as control treatments. PD significantly (p ≤ 0.05) inhibited more of the mycelial growth of these fungi than both controls. The antifungal activity of PD increased with increasing concentrations. The vapor diffusion assay was more effective in inhibiting the mycelial growth of these fungi than the agar diffusion assay. A good fit (R2, 0.950) of the experimental data in the Gompertz growth model and a significant difference in the model parameters, i.e., lag phase (λ), stationary phase (A) and mycelial growth rate, further showed the antifungal efficacy of PD. Therefore, PD could be the best antimicrobial compound against a wide range of microorganisms.

scholarly journals A Reinforcement Learning Framework for Spiking Networks with Dynamic Synapses

2011 ◽  
Vol 2011 ◽  
pp. 1-12 ◽  
Author(s):  
Karim El-Laithy ◽  
Martin Bogdan
Keyword(s):  
Reinforcement Learning ◽  
Spike Timing ◽  
Neural Representation ◽  
Model Parameters ◽  
Learning Framework ◽  
Reference Target ◽  
Wide Range ◽  
Spiking Network ◽  
Dynamic Synapses ◽  
Exclusive Or

An integration of both the Hebbian-based and reinforcement learning (RL) rules is presented for dynamic synapses. The proposed framework permits the Hebbian rule to update the hidden synaptic model parameters regulating the synaptic response rather than the synaptic weights. This is performed using both the value and the sign of the temporal difference in the reward signal after each trial. Applying this framework, a spiking network with spike-timing-dependent synapses is tested to learn the exclusive-OR computation on a temporally coded basis. Reward values are calculated with the distance between the output spike train of the network and a reference target one. Results show that the network is able to capture the required dynamics and that the proposed framework can reveal indeed an integrated version of Hebbian and RL. The proposed framework is tractable and less computationally expensive. The framework is applicable to a wide class of synaptic models and is not restricted to the used neural representation. This generality, along with the reported results, supports adopting the introduced approach to benefit from the biologically plausible synaptic models in a wide range of intuitive signal processing.

scholarly journals Modelling the Inflation and Elastic Instabilities of Rubber-Like Spherical and Cylindrical Shells Using a New Generalised Neo-Hookean Strain Energy Function

2021 ◽  
Author(s):  
Afshin Anssari-Benam ◽  
Andrea Bucchi ◽  
Giuseppe Saccomandi
Keyword(s):  
Experimental Data ◽  
Energy Function ◽  
Limit Point ◽  
Strain Energy ◽  
Cylindrical Shells ◽  
Strain Energy Function ◽  
Model Parameters ◽  
Wide Range ◽  
Cylindrical Tubes ◽  
Gent Model

AbstractThe application of a newly proposed generalised neo-Hookean strain energy function to the inflation of incompressible rubber-like spherical and cylindrical shells is demonstrated in this paper. The pressure ($P$ P ) – inflation ($\lambda $ λ or $v$ v ) relationships are derived and presented for four shells: thin- and thick-walled spherical balloons, and thin- and thick-walled cylindrical tubes. Characteristics of the inflation curves predicted by the model for the four considered shells are analysed and the critical values of the model parameters for exhibiting the limit-point instability are established. The application of the model to extant experimental datasets procured from studies across 19th to 21st century will be demonstrated, showing favourable agreement between the model and the experimental data. The capability of the model to capture the two characteristic instability phenomena in the inflation of rubber-like materials, namely the limit-point and inflation-jump instabilities, will be made evident from both the theoretical analysis and curve-fitting approaches presented in this study. A comparison with the predictions of the Gent model for the considered data is also demonstrated and is shown that our presented model provides improved fits. Given the simplicity of the model, its ability to fit a wide range of experimental data and capture both limit-point and inflation-jump instabilities, we propose the application of our model to the inflation of rubber-like materials.

scholarly journals Study on Friction in Automotive Shock Absorbers Part 1: Friction Simulation Using a Dynamic Friction Model in the Contact Zone of an FEM Model

Vehicles ◽  
2021 ◽  
Vol 3 (2) ◽  
pp. 212-232
Author(s):  
Ludwig Herzog ◽  
Klaus Augsburg
Keyword(s):  
Ride Comfort ◽  
Viscous Friction ◽  
Simulation Method ◽  
Friction Model ◽  
Model Parameters ◽  
Dynamic Friction ◽  
Friction Modeling ◽  
Shock Absorbers ◽  
Operation Conditions ◽  
Wide Range

The important change in the transition from partial to high automation is that a vehicle can drive autonomously, without active human involvement. This fact increases the current requirements regarding ride comfort and dictates new challenges for automotive shock absorbers. There exist two common types of automotive shock absorber with two friction types: The intended viscous friction dissipates the chassis vibrations, while the unwanted solid body friction is generated by the rubbing of the damper’s seals and guides during actuation. The latter so-called static friction impairs ride comfort and demands appropriate friction modeling for the control of adaptive or active suspension systems. In this article, a simulation approach is introduced to model damper friction based on the most friction-relevant parameters. Since damper friction is highly dependent on geometry, which can vary widely, three-dimensional (3D) structural FEM is used to determine the deformations of the damper parts resulting from mounting and varying operation conditions. In the respective contact zones, a dynamic friction model is applied and parameterized based on the single friction point measurements. Subsequent to the parameterization of the overall friction model with geometry data, operation conditions, material properties and friction model parameters, single friction point simulations are performed, analyzed and validated against single friction point measurements. It is shown that this simulation method allows for friction prediction with high accuracy. Consequently, its application enables a wide range of parameters relevant to damper friction to be investigated with significantly increased development efficiency.

scholarly journals Sequential modelling of the Earth’s core magnetic field

2020 ◽  
Vol 72 (1) ◽  
Author(s):  
Guillaume Ropp ◽  
Vincent Lesur ◽  
Julien Baerenzung ◽  
Matthias Holschneider
Keyword(s):  
Magnetic Field ◽  
Prior Information ◽  
Spatial Scales ◽  
Model Parameters ◽  
International Geomagnetic Reference Field ◽  
The Earth ◽  
Temporal And Spatial ◽  
Different Sources ◽  
Original Approach ◽  
Modelling Approach

Abstract We describe a new, original approach to the modelling of the Earth’s magnetic field. The overall objective of this study is to reliably render fast variations of the core field and its secular variation. This method combines a sequential modelling approach, a Kalman filter, and a correlation-based modelling step. Sources that most significantly contribute to the field measured at the surface of the Earth are modelled. Their separation is based on strong prior information on their spatial and temporal behaviours. We obtain a time series of model distributions which display behaviours similar to those of recent models based on more classic approaches, particularly at large temporal and spatial scales. Interesting new features and periodicities are visible in our models at smaller time and spatial scales. An important aspect of our method is to yield reliable error bars for all model parameters. These errors, however, are only as reliable as the description of the different sources and the prior information used are realistic. Finally, we used a slightly different version of our method to produce candidate models for the thirteenth edition of the International Geomagnetic Reference Field.

A reinterpretation of Scottish ‘hummocky moraine’ and its significance for the deglaciation of the Scottish Highlands during the Younger Dryas or Loch Lomond Stadial

1993 ◽  
Vol 130 (3) ◽  
pp. 301-318 ◽  
Author(s):  
Matthew R. Bennett ◽  
Geoffrey S. Boulton
Keyword(s):  
Environmental Conditions ◽  
Field Survey ◽  
Spatial Scales ◽  
Younger Dryas ◽  
North West ◽  
Scottish Highlands ◽  
Ice Cap ◽  
The North ◽  
Loch Lomond

AbstractThe aim of this paper is to demonstrate that much of the ‘hummocky moraine’ present within the northern part of the LochLomond Readvance ice cap formerly situated in the North West Scottish Highlands may be interpreted as suites of ice-front moraines deposited during active decay. These landforms can be used to reconstruct ice cap decay, whichleads to important insights into the shrinking form of the ice cap and associated environmental conditions. Evidence has been collected from 10803 airphotographs and from detailed field survey. It is presented at three spatial scales.

Coupled Thermo-Hydro-Geochemical Models of Engineered Barrier Systems: The Febex Project

2000 ◽  
Vol 663 ◽  
Author(s):  
J. Samper ◽  
R. Juncosa ◽  
V. Navarro ◽  
J. Delgado ◽  
L. Montenegro ◽  
...  
Keyword(s):  
Large Scale ◽  
Reference Model ◽  
Numerical Models ◽  
Full Scale ◽  
Small Scale ◽  
Model Parameters ◽  
In Situ Test ◽  
Wide Range ◽  
Engineered Barrier

ABSTRACTFEBEX (Full-scale Engineered Barrier EXperiment) is a demonstration and research project dealing with the bentonite engineered barrier designed for sealing and containment of waste in a high level radioactive waste repository (HLWR). It includes two main experiments: an situ full-scale test performed at Grimsel (GTS) and a mock-up test operating since February 1997 at CIEMAT facilities in Madrid (Spain) [1,2,3]. One of the objectives of FEBEX is the development and testing of conceptual and numerical models for the thermal, hydrodynamic, and geochemical (THG) processes expected to take place in engineered clay barriers. A significant improvement in coupled THG modeling of the clay barrier has been achieved both in terms of a better understanding of THG processes and more sophisticated THG computer codes. The ability of these models to reproduce the observed THG patterns in a wide range of THG conditions enhances the confidence in their prediction capabilities. Numerical THG models of heating and hydration experiments performed on small-scale lab cells provide excellent results for temperatures, water inflow and final water content in the cells [3]. Calculated concentrations at the end of the experiments reproduce most of the patterns of measured data. In general, the fit of concentrations of dissolved species is better than that of exchanged cations. These models were later used to simulate the evolution of the large-scale experiments (in situ and mock-up). Some thermo-hydrodynamic hypotheses and bentonite parameters were slightly revised during TH calibration of the mock-up test. The results of the reference model reproduce simultaneously the observed water inflows and bentonite temperatures and relative humidities. Although the model is highly sensitive to one-at-a-time variations in model parameters, the possibility of parameter combinations leading to similar fits cannot be precluded. The TH model of the “in situ” test is based on the same bentonite TH parameters and assumptions as for the “mock-up” test. Granite parameters were slightly modified during the calibration process in order to reproduce the observed thermal and hydrodynamic evolution. The reference model captures properly relative humidities and temperatures in the bentonite [3]. It also reproduces the observed spatial distribution of water pressures and temperatures in the granite. Once calibrated the TH aspects of the model, predictions of the THG evolution of both tests were performed. Data from the dismantling of the in situ test, which is planned for the summer of 2001, will provide a unique opportunity to test and validate current THG models of the EBS.

Sign in / Sign up

Export Citation Format

Share Document