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2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Subir Kumar Ray ◽  
Nirmalya Ghosh ◽  
Alex Vitkin

AbstractPlasmonic gold nanorods (GNRs) are finding increasing use in biomedicine due to their unique electromagnetic properties, optical contrast enhancement and biocompatibility; they also show promise as polarization contrast agents. However, quantification of their polarization-enhancing properties within heterogeneous turbid media remains challenging. We report on polarization response in controlled tissue phantoms consisting of dielectric microsphere scatterers with varying admixtures of GRNs. Experimental Mueller matrix measurements and polarization sensitive Monte-Carlo simulations show excellent agreement. Despite the GNRs’ 3D random orientation and distribution in the strong multiply scattering background, significant linear diattenuation and retardance were observed. These exclusive measurable characteristics of GNRs suggest their potential uses as contrast enhancers for polarimetric assessment of turbid biological tissue.


2021 ◽  
Author(s):  
Maria Mytiliniou ◽  
Joeri A.J. Wondergem ◽  
Thomas Schmidt ◽  
Doris Heinrich

Intracellular transport is pivotal for cell growth and survival. Malfunctions in this process have been associated with devastating neurodegenerative diseases, posing a need for deeper understanding of the involved mechanisms. Here, we used an experimental methodology that lead neurites of differentiated PC12 cells in either of two configurations: an one-dimensional, where the neurites align along lines, or a two-dimensional configuration, where the neurites adopt a random orientation and shape on a flat substrate. We subsequently monitored the motion of functional organelles, the lysosomes, inside the neurites. Implementing a time-resolved analysis of the mean-squared displacement, we quantitatively characterized distinct motion modes of the lysosomes. Our results indicate that neurite alignment gives rise to faster diffusive and super-diffusive lysosomal motion in comparison to the situation where the neurites are randomly oriented. After inducing lysosome swelling through an osmotic challenge by sucrose, we confirmed the predicted slowdown in diffusive mobility. Surprisingly we found that the swelling-induced mobility change affected each of the (sub-/super-) diffusive motion modes differently and depended on the alignment configuration of the neurites. Our findings imply that intracellular transport is significantly and robustly dependent on cell morphology, which might be in part controlled by the extracellular matrix.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ki Hyun Nam ◽  
Jihan Kim ◽  
Yunje Cho

AbstractThe serial crystallography (SX) technique enables the determination of the room-temperature structure of a macromolecule while causing minimal radiation damage, as well as the visualization of the molecular dynamics by time-resolved studies. The fixed-target (FT) scanning approach is one method for SX sample delivery that minimizes sample consumption and minimizes physical damage to crystals during data collection. Settling of the crystals on the sample holder in random orientation is important for complete three dimensional data collection. To increase the random orientation of crystals on the sample holder, we developed a polyimide mesh-based sample holder with irregular crystal mounting holes for FT-SX. The polyimide mesh was fabricated using a picosecond laser. Each hole in the polyimide mesh has irregularly shaped holes because of laser thermal damage, which may cause more crystals to settle at random orientations compared to regular shaped sample holders. A crystal sample was spread onto a polyimide-mesh, and a polyimide film was added to both sides to prevent dehydration. Using this sample holder, FT-SX was performed at synchrotron and determined the room-temperature lysozyme structure at 1.65 Å. The polyimide mesh with irregularly shaped holes will allow for expanded applications in sample delivery for FT-SX experiments.


2021 ◽  
Author(s):  
Daisuke Nakane ◽  
Shoko Odaka ◽  
Kana Suzuki ◽  
Takayuki Nishizaka

A collective motion of self-driven particles has been a fascinating subject in physics and biology. Sophisticated macroscopic behavior emerges through a population in thousands or millions of bacterial cells, propelling itself by flagellar rotation and its chemotactic response. Here we found a series of collective motions accompanying successive phase-transitions in a non-flagellated rod-shaped soil bacterium, Flavobacterium johnsoniae, which was driven by a surface cell movement known as gliding motility. When we spot the cells on an agar plate with a low level of nutrients, the bacterial community exhibited vortex patterns that spontaneously appeared as lattice and integrated into a large-scale circular plate. All patterns exhibit with monolayer of bacteria, which enable to visualize an individual cell with a high resolution among a wide-range pattern two-dimensionally. The single cells moved at random orientation, but the cells connected with one another showed left-turn biased trajectories in starved environment. This feature is possibly due to the collision of cells inducing a nematic alignment of dense cells as self-propelled rods. Subsequently, each vortex oscillated independently, and then transformed to the rotating mode as an independent circular plate. Notably, the rotational direction of the circular plate was counterclockwise without exception. The plates developed accompanying rotation with constant angular velocity, suggesting that the mode is an efficient strategy for bacterial survival. Importance Self-propelled bacteria propelled by flagella rotation often display highly organized dynamic patterns at high cell densities. Here we found a new mode of collective motion in non-flagellated bacteria: vortex patterns were spontaneously appeared as lattice and integrated into a large-scale circular plate comprising hundreds of thousands of cells, which exhibited unidirectional rotation in a counterclockwise manner and expanded in size on agar. A series of collective motions was driven by gliding motility of the rod-shaped soil bacterium Flavobacterium johnsoniae. In a low nutrient environment, single cells moved at random orientation while cells at high density moved together as a unitary cluster. This might be an efficient strategy for cells of this species to find nutrients.


2021 ◽  
Author(s):  
Jian Wang ◽  
Ke Yang ◽  
Dongshuai Zhou ◽  
Li Xie ◽  
Yalin Lu ◽  
...  

Abstract 6 mm thick 2A14 Al alloy plates were friction stir processed with different initial precipitation states of as-cast, homogenization, rolling and T6. The results indicated that FSP can dramatically reduce the grain and particles size and promote the formation of fine recrystallized grains with random orientation in the stirred zone (SZ). No significant influences of the initial precipitation states of base metal (BM) on the grain size, grain boundary characteristic, texture component and texture intensity of SZ were perceived. Rather, the initial precipitation states can evidently affect the morphology and distribution of precipitates and dislocations. The dominant C and A1* texture components developed in the SZ are correlated with the shear deformation and dynamic recrystallization. And the weakened texture intensity created in the SZ after FSP also signifying that discontinuous dynamic recrystallization might be involved. Compared with the corresponding BM, the SZ fabricated by the BM under as-cast and homogenized states were strengthened arises from the obvious refined grains, uniform dispersed particles and elimination of casting defects caused by FSP, while the softening of SZ were observed for the BM under rolled and T6 states, which are mainly dependent on the reduction of dislocation density and dissolution/coarsening of fine precipitates during FSP.


Polymers ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 768
Author(s):  
Quim Tarrés ◽  
David Hernández-Díaz ◽  
Mònica Ardanuy

Stiffness of material is a key parameter that allows the use of material for structural or semi-structural purposes. Besides, lightweight materials are increasingly calling the attention of the industry. Environmental impact is also increasing in its importance. Bio-based materials produced from renewable sources can be good candidates for structural purposes combining lightweight and low environmental impact. Nonetheless, similar mechanical properties of commodities have to be reached with such materials. In this work, composite materials from corn stover fibers as a bio-polyethylene reinforcement were produced and tested. The effect of coupling agents to improve the fiber–matrix interface has been evaluated. It has been found that coupling agent content influenced the stiffness of the materials, increasing the Young’s modulus and the material processability. The best performance was achieved for a 6% of coupling agent, corresponding to 4.61 GPa for 50 w/w% of corn stover fibers. Micromechanics showed the impact of the semi-random orientation of the fibers and the lesser impact of its morphology. It was possible to determine a triangular packing of the composites as a hypothesis for future research.


2021 ◽  
Author(s):  
Peizhao Liu ◽  
Yann Battie ◽  
Yutaka Okazaki ◽  
Naoya Ryu ◽  
Emilie Pouget ◽  
...  

Helical and twisted silica nanoribbons, deposited in an in-plane direction and with a random orientation, on a quartz substrate showed chiral optical scattering, and helical nanoribbons had a g-factor of the order of 10−2 below 250 nm.


Polymers ◽  
2021 ◽  
Vol 13 (1) ◽  
pp. 153
Author(s):  
Mohammad Alkhedher ◽  
Pouyan Talebizadehsardari ◽  
Arameh Eyvazian ◽  
Afrasyab Khan ◽  
Naeim Farouk

The current paper is aimed to investigate the effects of waviness, random orientation, and agglomeration factor of nanoreinforcements on wave propagation in fluid-conveying multi-walled carbon nanotubes (MWCNTs)-reinforced nanocomposite cylindrical shell based on first-order shear deformable theory (FSDT). The effective mechanical properties of the nanocomposite cylindrical shell are estimated employing a combination of a novel form of Halpin-Tsai homogenization model and rule of mixture. Utilized fluid flow obeys Newtonian fluid law and it is axially symmetric and laminar flow and it is considered to be fully developed. The effect of flow velocity is explored by implementing Navier-Stokes equation. The kinetic relations of nanocomposite shell are calculated via FSDT. Moreover, the governing equations are derived using the Hamiltonian approach. Afterward, a method which solves problems analytically is applied to solve the obtained governing equations. Effects of a wide range of variants such as volume fraction of MWCNTs, radius to thickness ratio, flow velocity, waviness factor, random orientation factor, and agglomeration factor on the phase velocity and wave frequency of a fluid conveying MWCNTs-reinforced nanocomposite cylindrical shell were comparatively illustrated and the results were discussed in detail.


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