Chromosome-level genome assembly and annotation of two lineages of the ant Cataglyphis hispanica: steppingstones towards genomic studies of hybridogenesis and thermal adaptation in desert ants

Cataglyphis are thermophilic ants that forage during the day when temperatures are highest and sometimes close to their critical thermal limit. Several Cataglyphis species have evolved unusual reproductive systems such as facultative queen parthenogenesis or social hybridogenesis, which have not yet been investigated in detail at the molecular level. We generated high-quality genome assemblies for two hybridogenetic lineages of the Iberian ant Cataglyphis hispanica using long-read Nanopore sequencing and exploited chromosome conformation capture (3C) sequencing to assemble contigs into 26 and 27 chromosomes, respectively. Males of one lineage were karyotyped to confirm the number of chromosomes inferred from 3C data. We obtained transcriptomic data to assist gene annotation and built custom repeat libraries for each of the two assemblies. Comparative analyses with 19 other published ant genomes were also conducted. These new genomic resources pave the way for exploring the genetic mechanisms underlying the remarkable thermal adaptation and the molecular mechanisms associated with transitions between different genetic systems characteristics of the ant genus Cataglyphis.

Resilience of cold-water coral holobionts to thermal stress

Cold-water corals are threatened by global warming, especially in the Mediterranean Sea where they live close to their upper known thermal limit (i.e. 13°C), yet their response to rising temperatures is not well known. Here, temperature effects on Lophelia pertusa and Madrepora oculata holobionts (i.e. the host and its associated microbiome) were investigated. We found that at warmer seawater temperature (+2°C), L. pertusa showed a modification of its microbiome prior to a change in behaviour, leading to lower energy reserves and skeletal growth, whereas M. oculata was more resilient. At extreme temperature (+4°C), both species quickly lost their specific bacterial signature followed by lower physiological activity prior to death. In addition, our results showing the holobionts' negative response to colder temperatures (−3°C), suggest that Mediterranean corals live close to their thermal optimum. The species-specific response to temperature change highlights that global warming may affect dramatically the main deep-sea reef-builders, which would alter the associated biodiversity and related ecosystem services.

Highly sensitive force measurements in an optically generated, harmonic hydrodynamic trap

The use of optical tweezers to measure forces acting upon microscopic particles has revolutionised fields from material science to cell biology. However, despite optical control capabilities, this technology is highly constrained by the material properties of the probe, and its use may be limited due to concerns about the effect on biological processes. Here we present a novel, optically controlled trapping method based on light-induced hydrodynamic flows. Specifically, we leverage optical control capabilities to convert a translationally invariant topological defect of a flow field into an attractor for colloids in an effectively one-dimensional harmonic, yet freely rotatable system. Circumventing the need to stabilise particle dynamics along an unstable axis, this novel trap closely resembles the isotropic dynamics of optical tweezers. Using magnetic beads, we explicitly show the existence of a linear force-extension relationship that can be used to detect femtoNewton-range forces with sensitivity close to the thermal limit. Our force measurements remove the need for laser-particle contact, while also lifting material constraints, which renders them a particularly interesting tool for the life sciences and engineering.

Critical Thickness of Free-Standing Nanothin Films Made of Melted Polyethylene Chains via Molecular Dynamics

The mechanical stability of nanothin free-standing films made of melted polyethylene chains was predicted via molecular dynamics simulations in the range of 373.15–673.15 K. The predicted critical thickness, tc, increased with the square of the temperature, T, with additional chains needed as T increased. From T = 373.15 K up to the thermal limit of stability for polyethylene, tc values were in the range of nanothin thicknesses (3.42–5.63 nm), which approximately corresponds to 44–55 chains per 100 nm2. The density at the center of the layer and the interfacial properties studied (density profiles, interfacial thickness, and radius of gyration) showed independence from the film thickness at the same T. The polyethylene layer at its tc showed a lower melting T (<373.15 K) than bulk polyethylene.

Planning models for optimal routing of radial distribution systems

<span>This paper presents three planning models for optimal routing of radial distribution systems. In the first two models, the cost function includes capital cost of lines, energy loss cost, and bays cost. The constraints equations include power balance equations, voltage drop equations, radiality equations, logic equations, thermal limit equations, and bus voltage limit equations. The first model considers the energy loss equation in its quadratic form while the second model approximates the energy loss equation of each cable size by a simple linear segment considering the economic loading of each cable size. In the third model, two sub-models are used where the first one gets the optimal radial network configuration regardless of the cable sizes and voltage constraints. In the second sub-model the best cable size on each selected line of the first model is determined to minimize the system costs while considering the bus voltage limit constraint and thermal limit constraint. Verification of the proposed planning models has been made using a real 11 kV 34-bus distribution network with 68 initial lines.</span>

Neural dysfunction at the upper thermal limit in the zebrafish

ABSTRACTUnderstanding animal thermal tolerance is crucial to predict how animals will respond to increasingly warmer temperatures, and to mitigate the impact of the climate change on species survival. Yet, the physiological mechanisms underlying animal thermal tolerance are largely unknown. In this study, we developed a method for measuring upper thermal limit (CTmax) in larval zebrafish (Danio rerio) and found that it occurs at similar temperatures as in adult zebrafish. We discovered that CTmax precedes a transient, heat-induced brain-wide depolarization during heat ramping. By monitoring heart rate, we established that cardiac function is sub-optimal during the period where CTmax and brain depolarization occur. In addition, we found that oxygen availability affects both locomotor neural activity and CTmax during a heat stress. The findings of this study suggest that neural impairment due to limited oxygen availability at high temperatures can cause CTmax in zebrafish.HighlightsLarval zebrafish reach their critical thermal limit (CTmax) at similar temperature as adult zebrafishAcute heat stress causes a brain-wide spreading depolarization near the upper thermal limitCTmax precedes brain-wide depolarizationHeart rate declines at high temperatures but is maintained during CTmax and brain depolarizationNeural activity is impaired prior to CTmax and brain-wide depolarizationOxygen availability in the water affects both CTmax and neural activity

Critical Thermal maximum measurements and its biological relevance: the case of ants

ABSTRACTUpper thermal limit (UTL) is a key trait in evaluating ectotherm fitness. Critical Thermal maximum CTmax, often used to characterize the UTL of an organism in laboratory setting, needs to be accurate to characterize this significant and field-relevant threshold. The lack of standardization in CTmax assays has, however, introduce methodological problems in its measurement and incorrect estimation of species upper thermal limit; with potential major implications on the use of CTmax in forecasting community dynamics under climate change. In this study we ask if a satisfactory ramping rate can be identified to produce accurate measures of CTmax for multiple species.We first identified the most commonly used ramping rates (i.e. 0.2, 0.5 and 1.0 °Cmin−1) based on a literature review, and determined the ramping rate effects on CTmax value measurements in 27 ant species (7 arboreal, 16 ground, 4 subterranean species) from eight subfamilies using both dynamic and static assays. In addition, we used field observations on multiple species foraging activity in function of ground temperatures to identify the most biologically relevant CTmax value to ultimately develop a standardized methodological approach.Integrating dynamic and static assays provided a powerful approach to identify a suitable ramping rate for the measurements of CTmax values in ants. Our results also showed that among the values tested the ramping rate of 1 °Cmin−1 is optimal, with convergent evidences from CTmax values measured in laboratory and from foraging thermal maximum measured in the field. Finally, we illustrate how methodological bias in terms of physiological trait measurements can also affect the detection of phylogenetic signal (Pagel’s λ and Bloomberg’s K) in subsequent analyses.Overall, this study presents a methodological framework allowing the identification of suitable and standardized ramping rates for the measurement of ant CTmax, which may be used for other ectotherms. Particular attention should be given to CTmax values retrieved from less suitable ramping rate, and the potential biases that functional trait based research may induce on topics such as global warming, habitat conversion or their impacts on analytical interpretations on phylogenetic conservatism.