The first Miocene fossils from coastal woodlands in the southern East African Rift

The Miocene is a key time in the evolution of African mammals and their ecosystems witnessing the origin of the African apes and the isolation of eastern coastal forests through an expanding biogeographic arid corridor. Until recently, however, Miocene sites from the southeastern regions of the continent were unknown. Here we report discovery of the first Miocene fossil teeth from the shoulders of the Urema Rift in Gorongosa National Park, Mozambique, at the southern East African Rift System. We provide the first 1) radiometric age determinations of the fossiliferous Mazamba Formation, 2) reconstructions of past vegetation in the region based on pedogenic carbonates and fossil wood, and 3) description of fossil teeth from the southern rift. Gorongosa is unique in the East African Rift System in combining marine invertebrates, marine vertebrates, terrestrial mammals, and fossil woods in coastal paleoenvironments. The Gorongosa fossil sites offer the first evidence of persistent woodlands and forests on the coastal margins of southeastern Africa during the Miocene, and an exceptional assemblage of fossil vertebrates including new species. Further work will allow the testing of hypotheses positing the formation of a northeast-southwest arid corridor isolating species on the eastern coastal forests from those elsewhere in Africa.

Evolutionary and Ecological Explanations for the Elevational Flexibility of Several East African Bird Species Complexes

Africa’s montane areas are broken up into several large and small units, each isolated as forest-capped “sky islands” in a “sea” of dry lowland savanna. Many elements of their biota, including montane forest birds, are shared across several disjunct mountains, yet it has been difficult to rigorously define an Afromontane forest avifauna, or determine its evolutionary relationships with the birds of the surrounding lowland forests. In order to trace the historical relationship between lowland and highland avifaunas, we review cases of species or groups of closely related species with breeding populations at different elevations, and use phylogeographic methods to explore the historical connections between such populations within the biodiversity hotspot of East Africa. The study reveals several idiosyncratic patterns, but also a prominent number of cases of gene flow between populations in southern areas, mainly around the Malawi Rift, and mountains and coastal forests to the north, close to the equator. This may reflect more continuous past distributions through northern Mozambique and coastal Tanzania, or seasonal migrations between areas with different rainfall regimes. Over time, these distributional dynamics have resulted in a higher persistence of lineages, and an accumulation of forest-dependent lineages within the Eastern Arc Mountains of Tanzania and the northern part of the coastal forest mosaic.

Flood of Ecology - Floodplain Habitation

<p>Larger and more devastating flood events are happening more frequently across the planet, but flooding is a natural occurrence for any river system. It is only due to human modification of the river system, through the removal of natural features and attempts at flood control, that creates flood hazards that cause damage to communities and ecosystems. Kapiti Coast’s terrain consisted, pre 19th century, of a mixture of dense coastal forests and extensive wetlands. The landscape has and always will be prone to flooding. With the addition of the expressway to the region, making it easier to travel to and from the capital Wellington, it is expected that the population of Kapiti will grow. But biodiversity may get lost, and flooding may become increasingly more frequent. How might new settlers learn to live with flooding and the constant risk that every time it rains it may cause damage to their homes or businesses? Can there be other benefits to floodplain management, such as biodiversity and recreation? The aim of this research is to investigate and develop strategies to aid in the settlement of floodplains so that biodiversity is improved, allowing people to live with floods and without the fear that flooding may cause damage. Specifically, the design-led research seeks to generate solutions that improve both flood awareness and flood protection along the Waikanae River. The design seeks to allow the river to express its own flow patterns, and then secondly, how settlement will work within that. It can then be a catalyst for settlement of floodplain areas along the edge of the river. This thesis will explore how ecology, rehabilitation and natural flood protection can be employed amongst an expanding urban context to create a new way of thinking about our rivers and mitigating the ever pressing issue of flooding.</p>

Flood of Ecology - Floodplain Habitation

<p>Larger and more devastating flood events are happening more frequently across the planet, but flooding is a natural occurrence for any river system. It is only due to human modification of the river system, through the removal of natural features and attempts at flood control, that creates flood hazards that cause damage to communities and ecosystems. Kapiti Coast’s terrain consisted, pre 19th century, of a mixture of dense coastal forests and extensive wetlands. The landscape has and always will be prone to flooding. With the addition of the expressway to the region, making it easier to travel to and from the capital Wellington, it is expected that the population of Kapiti will grow. But biodiversity may get lost, and flooding may become increasingly more frequent. How might new settlers learn to live with flooding and the constant risk that every time it rains it may cause damage to their homes or businesses? Can there be other benefits to floodplain management, such as biodiversity and recreation? The aim of this research is to investigate and develop strategies to aid in the settlement of floodplains so that biodiversity is improved, allowing people to live with floods and without the fear that flooding may cause damage. Specifically, the design-led research seeks to generate solutions that improve both flood awareness and flood protection along the Waikanae River. The design seeks to allow the river to express its own flow patterns, and then secondly, how settlement will work within that. It can then be a catalyst for settlement of floodplain areas along the edge of the river. This thesis will explore how ecology, rehabilitation and natural flood protection can be employed amongst an expanding urban context to create a new way of thinking about our rivers and mitigating the ever pressing issue of flooding.</p>

Eremitis clarkiae and E. vinacea (Poaceae, Bambusoideae): two new species of herbaceous bamboos endemic to the Atlantic Forest of southern Bahia, Brazil increase the diversity of the genus in this hotspot

Background and aims – We here describe two new species of Eremitis from Bahia, Brazil, and compare them with morphologically similar species. We also provide illustrations, photos, a distribution map, and notes on habitat and conservation status of the new species.Material and methods – This study was based on fieldwork, analysis of herbarium specimens, and literature review. Specimens collected were analyzed and photographed during fieldwork and observed in cultivation in a greenhouse. The conservation assessment is based on field observations and spatial analyses, following the IUCN guidelines and criteria.Results – Eremitis clarkiae sp. nov. occurs in southern Bahia and has been collected only twice, in the municipality of Floresta Azul. The new species is similar to E. jardimii and E. robusta, both also endemic to Bahia, but can be distinguished by several vegetative and reproductive structures longer than those observed in these species, such as leafy culms, ligules, decumbent culm inflorescences, and pedicels of the staminate spikelets of the staminate whorls. Eremitis vinacea sp. nov. was collected in three localities in southern Bahia, but only the type population was found during recent field trips, in the municipality of Camacã. It is similar to E. afimbriata, a species endemic to Espírito Santo state, being differentiated by its leaf sheaths with persistent fimbriae (vs absent), leaf blades with green adaxial surface (vs bluish green with a blue iridescence), and a single inflorescence on decumbent culms (vs multiple). Both new species are endemic to the Bahian Coastal Forests subregion and should be considered Critically Endangered (CR), according to the IUCN guidelines and criteria.

GIS-Based Aesthetic Appraisal of Short-Range Viewsheds of Coastal Dune and Forest Landscapes

This paper demonstrates the possibilities of a Geographical Information System (GIS) for investigating and explicating the spatial variation of the short-range viewshed aesthetic appeal in a World Heritage coastal dune and forest area. The study pursues the following objectives: (1) develop and trial a GIS-based algorithm for computing the Aesthetic Appeal Index for a Short-Range Viewshed (ǣ); (2) deliver an output map showing the spatial variation of the computed ǣ values in the target territory and distribution of the zones with high scenic quality and potential aesthetic ecosystem services (PAES); and (3) assess management alternatives in zones with high PAES and high conservation value. This study combines two key innovative aspects. First, it integrates an objective digital map of habitats with subjective scenic preferences of coastal forest and dune landscapes based on psychophysical and cognitive perceptions of scenic beauty. Second, it applies a GIS-based algorithm to translate subjective scenic preferences to an output map of ǣ. The study’s main conclusion is that the combined aesthetic appraisal of the immediate and foreground viewshed of coastal forests and dunes, by applying a specially created GIS algorithm, allows an assessment of the scenic quality of this landscape reliably in statistical terms.

Development of eco-culture tourism in Burung Island and Suwangi Island in South Kalimantan

Ecotourism is becoming increasingly popular as a tourist attraction. South Kalimantan is not one of the top ten tourist destinations, but the province ranked 15th in terms of the number of trips taken by Indonesian tourists in 2017. Tanah Bumbu Regional Government in South Kalimantan intends to promote ecotourism on its land. This study reveals local government initiatives to build and develop natural tourism in the natural tourism potential of Burung Island and Suwangi Island in Tanah Bumbu District using a qualitative approach and data collection techniques through interviews, field observations, and literature studies. Respondents include members of the community, community leaders, village government, and local government. The scope of the study includes the actual conditions on Burung Island and Suwangi Island, the potential for nature tourism, and the development of the tourism concept. The findings reveal that Burung Island and Suwangi Island, which are part of Selat Laut Nature Reserve, have deteriorated. On the other hand, there are interesting objects that have abundant potencies for natural tourism, such as the spectrum of regional ecosystems from lowland rain forests, mangrove forests, and coastal forests; traditions in the form of traditional ceremonies; fauna of birds and proboscis monkeys; and man-made products such as durian gardens and seed nurseries as educational components. As a result, both Burung Island and Suwangi Island have the potencies to become natural tourism parks. Natural tourism development can provide an opportunity for alternative solutions to the problems of degraded conservation areas through field discoveries.

Coastal forests and conservation of water biological resources of the Arkhangelsk region

The consequence of the change in forestry legislation was the reduction in the boundaries of spawning protection zones and the transformation of the regime for the use of forest resources. Analysis of changes in the boundaries of coastal forests and the protection regime is the purpose of the research. The area of protective and valuable coastal forests is smaller in comparison with the previously designated spawning zones. They have been reduced to the size of fishery protection zones. In this regard, the authors consider it expedient to improve the institutional environment for the conservation of water biological resources in relation to the conditions of the Arkhangelsk region.

The mitochondrial genome and Epigenome of the Golden lion Tamarin from fecal DNA using Nanopore adaptive sequencing

Background The golden lion tamarin (Leontopithecus rosalia) is an endangered Platyrrhine primate endemic to the Atlantic coastal forests of Brazil. Despite ongoing conservation efforts, genetic data on this species remains scarce. Complicating factors include limitations on sample collection and a lack of high-quality reference sequences. Here, we used nanopore adaptive sampling to resequence the L. rosalia mitogenome from feces, a sample which can be collected non-invasively. Results Adaptive sampling doubled the fraction of both host-derived and mitochondrial sequences compared to sequencing without enrichment. 258x coverage of the L. rosalia mitogenome was achieved in a single flow cell by targeting the unfinished genome of the distantly related emperor tamarin (Saguinus imperator) and the mitogenome of the closely related black lion tamarin (Leontopithecus chrysopygus). The L. rosalia mitogenome has a length of 16,597 bp, sharing 99.68% sequence identity with the L. chrysopygus mitogenome. A total of 38 SNPs between them were identified, with the majority being found in the non-coding D-loop region. DNA methylation and hydroxymethylation were directly detected using a neural network model applied to the raw signal from the MinION sequencer. In contrast to prior reports, DNA methylation was negligible in mitochondria in both CpG and non-CpG contexts. Surprisingly, a quarter of the 642 CpG sites exhibited DNA hydroxymethylation greater than 1% and 44 sites were above 5%, with concentration in the 3′ side of several coding regions. Conclusions Overall, we report a robust new mitogenome assembly for L. rosalia and direct detection of cytosine base modifications in all contexts.

Principal Factors Influencing Tree Growth in Low-Lying Mid Atlantic Coastal Forests

Flood frequencies in coastal forests are increasing as sea level rise accelerates from 3–4 mm year−1 to possibly more than 10 mm year−1 by the end of this century. As flooding increases, coastal forests retreat, ghost forests form, and coastal marshes migrate inland. The existence of ghost forests makes the mechanism of forest retreat clear: low-lying trees become more exposed to coastal flooding until they ultimately die. Variability in these retreat rates, however, makes it difficult to predict where and when retreat will continue to occur. Understanding tree growth responses to tidal water levels relative to other environmental factors is a critical step in elucidating the factors that influence retreat variability. Here, dendrochronology was used to study factors that contribute to variations in growth patterns in four coastal forests fringing the Delaware and Barnegat Bays. Species chosen for study included loblolly pine (Pinus taeda), pitch pine (Pinus rigida), and American holly (Ilex opaca). Pearson’s and partial correlation tests showed that growth relationships with monthly environmental conditions varied across sites and were moderate in strength (generally R < 0.5), but each site had at least one significant growth-water level correlation. As coastal flooding exposure is spatially dependent, tree chronologies were also separated into high and low elevation groups. Pearson’s and partial correlation tests of the mean differences between elevation groups showed that at some sites, low elevation trees grew less than high elevation trees when water levels were high, as might be expected. At one site, however, lower elevation trees grew more when water levels were higher, which suggests that other interacting factors—regardless of current flood exposure—potentially have positive, yet likely temporary, influence over tree growth in these low-lying areas.