Data Soup Webinar, December 16, 2021: hosted by the Data Curation Network and the Journal of eScience Librarianship

Data Soup is a collaboration between the Journal of eScience Librarianship (JeSLIB) and the Data Curation Networkto host a series of community focused webinars/discussions to exchange practices for curating research data of different formats or subject areas among data curators. The lineup of the inaugural webinar includes the following speakers and topics from the recent JeSLIB Special Issue: Data Curation in Practice: Creating Guidance for Canadian Dataverse Curators: Portage Network’s Dataverse Curation Guide Alexandra Cooper, Michael Steeleworthy, Ève Paquette-Bigras, Erin Clary, Erin MacPherson, Louise Gillis, and Jason Brodeur, https://escholarship.umassmed.edu/jeslib/vol10/iss3/2; Active Curation of Large Longitudinal Surveys: A Case Study Inna Kouper, Karen L. Tucker, Kevin Tharp, Mary Ellen van Booven, and Ashley Clark, https://doi.org/10.7191/jeslib.2021.1210; Data Curation through Catalogs: A Repository-Independent Model for Data Discovery Helenmary Sheridan, Anthony J. Dellureficio, Melissa A. Ratajeski, Sara Mannheimer, and Terrie R. Wheeler, https://doi.org/10.7191/jeslib.2021.1203.

Longitudinal monitoring in Cambodia suggests higher circulation of alpha and betacoronaviruses in juvenile and immature bats of three species

Recent studies suggest that coronaviruses circulate widely in Southeast Asian bat species and that the progenitors of the SARS-Cov-2 virus could have originated in rhinolophid bats in the region. Our objective was to assess the diversity and circulation patterns of coronavirus in several bat species in Southeast Asia. We undertook monthly live-capture sessions and sampling in Cambodia over 17 months to cover all phases of the annual reproduction cycle of bats and test specifically the association between their age and CoV infection status. We additionally examined current information on the reproductive phenology of Rhinolophus and other bat species presently known to occur in mainland southeast China, Vietnam, Laos and Cambodia. Results from our longitudinal monitoring (573 bats belonging to 8 species) showed an overall proportion of positive PCR tests for CoV of 4.2% (24/573) in cave-dwelling bats from Kampot and 4.75% (22/463) in flying-foxes from Kandal. Phylogenetic analysis showed that the PCR amplicon sequences of CoVs (n = 46) obtained clustered in Alphacoronavirus and Betacoronavirus. Interestingly, Hipposideros larvatus sensu lato harbored viruses from both genera. Our results suggest an association between positive detections of coronaviruses and juvenile and immature bats in Cambodia (OR = 3.24 [1.46–7.76], p = 0.005). Since the limited data presently available from literature review indicates that reproduction is largely synchronized among rhinolophid and hipposiderid bats in our study region, particularly in its more seasonal portions (above 16° N), this may lead to seasonal patterns in CoV circulation. Overall, our study suggests that surveillance of CoV in insectivorous bat species in Southeast Asia, including SARS-CoV-related coronaviruses in rhinolophid bats, could be targeted from June to October for species exhibiting high proportions of juveniles and immatures during these months. It also highlights the need to develop long-term longitudinal surveys of bats and improve our understanding of their ecology in the region, for both biodiversity conservation and public health reasons.

The UK COVID-19 furlough scheme and associations with smoking, alcohol consumption and vaping: evidence from 8 UK longitudinal population surveys.

Background: Disruptions to employment status can impact smoking and alcohol consumption. During the COVID-19 pandemic, the UK implemented a furlough scheme to prevent job loss. We examine how furlough was associated with participants smoking, vaping and alcohol consumption behaviours in the early stages of the pandemic. Methods: Data were from 27,841 participants in eight UK adult longitudinal surveys. Participants self-reported employment status and current smoking, current vaping and drinking alcohol (>4 days/week or 5+ drinks per typical occasion) both before and during the pandemic (April-July 2020). Risk ratios were estimated within each study using modified Poisson regression, adjusting for a range of potential confounders, including pre-pandemic behaviour. Findings were synthesised using random effects meta-analysis. Sub-group analyses were used to identify whether associations differed by gender, age or education. Results: Compared to stable employment, neither furlough, no longer being employed, nor stable unemployment were associated with smoking, vaping or drinking, following adjustment for pre-pandemic characteristics. However, some sex differences in these associations were observed, with stable unemployment associated with smoking for women (ARR=1.35; 95% CI: 1.00-1.82; I2: 47%) but not men (0.84; 95% CI: 0.67-1.05; I2: 0%). No longer being employed was associated with vaping among women (ARR=2.74; 95% CI: 1.59-4.72; I2: 0%) but not men (ARR=1.25; 95% CI: 0.83-1.87; I2: 0%). There was little indication of associations with drinking differing by age, gender or education. Conclusions: We found no clear evidence of furlough or unemployment having adverse impacts on smoking, vaping or drinking behaviours during the early stages of the COVID-19 pandemic in the UK, with differences in risk compared to those who remained employed largely explained by pre-pandemic characteristics.

Modelos de gestão por competências em organizações líderes no Brasil

Purpose: To investigate into the strategic alignment of competency-based management (CBM) models implemented in 95 Brazilian organizations, leaders in their respective segments.Design / methodology / approach: The study is a longitudinal, exploratory-descriptive study under a qualitative and quantitative approach.Findings: A great similarity was found in the competencies in the CBM models, both in terms of incidence of competencies and similarity of their descriptions.Research limitations / implications: The study reveals a trend towards a disconnection between individual competencies and organizational strategies and values, and suggests four possible propositions to be investigated in future studies: P1: Absence of conceptual rigor for competences; P2: Insufficient dedication of time to implement a model; P3: Dissemination of “off-the-shelf models”, and P4: Institutionalization of CBMs as a dominant practice for people management.Practical implications: The results point to the need for organizations, when building or updating their CBM models, to pay attention to the concept of competencies used, ensuring the incorporation of the organizational strategy into the model, and dedicating adequate time to its elaboration and implementation in order to customize the CBM model to their needs.Originality / value: It constitutes one of the few longitudinal surveys with a representative sample of existing CBM models in Brazil and worldwide; hence, it captured a phenomenon (homogenization of CBM) that has been difficult to be observed outside this research.

Health Surveys

Surveys are used to collect data on the population distribution and frequency of health behaviours and use of services, health risks and diseases, as well as for the monitoring the implementation of health interventions, services, and programmes. Cross-sectional surveys collect prevalence data and longitudinal surveys collect mainly incidence information. Surveys can provide more accurate data than is available from local health information or surveillance systems. Survey methods are explained, such as on objectives, choice of variables, and sampling. Before undertaking surveys, local teams are advised to seek specialist advice and support.

Multiple sclerosis epidemiological trends in Italy highlight the environmental risk factors

Italy is definitely a high-risk country for multiple sclerosis (MS). Over the last 50 years, several epidemiological studies, including longitudinal surveys, have disclosed that MS incidence and prevalence in Italy mainland and Islands (Sardinia and Sicily) have progressively increased, picturing a semi-parabolic curve. Based on the comprehensive scrutiny of 58 papers, we conclude that the latitude risk gradient does not fit to the Italian map of MS. The genetic heterogeneity of the Italian ethnicities, that likely forms the basis of MS predisposition, does not account for the dramatic increase of MS incidence and prevalence observed in Italy over the last half century that, rather, seems better explained by the effect of environmental factors.

Solar Panels and Political Attitudes

In the fight against climate change, renewable energy has been subsidised in many countries. With the costs passed onto consumers, governments are paying those, for example, who instal domestic solar panels on top of their homes and feed electricity back into the system at preferential rates. We know that substantial amounts of income flow into households with solar installations as a result, but we do not know much about the political consequences of these programmes. Similar government programmes are known to have resource and interpretative effects on participants, leading to changes in their attitudes. Drawing on three longitudinal surveys from Germany, United Kingdom, and Switzerland, this article analyses whether installation of these solar panels causes meaningful changes in households’ various political attitudes. Using fixed-effect models as the identification strategy, the article reports null results – solar installations do not seem to generate political attitudes. This is good as well as bad news for actors looking to increase the amount of renewable energy produced through solar installations.

Prosperity in Rural Africa?

What does it mean to say that rural areas of Africa are poor? Many people insist that in rural African populations poverty is prevalent. This is either because the smallholder agricultural practices are unproductive or it is because economic policies have not protected and promoted African farming. But whether this deprivation is the fault of the peasant, or the government, both sides agree on the facts of rural poverty. However in both cases rural poverty is described using measures which make it hard, if not impossible, to capture new forms of wealth that rural people may be accruing. These new forms of wealth, which largely comprise productive assets, are especially important because they feature so prominently in rural peoples’ own definitions of wealth. Using an unprecedented collection of longitudinal surveys, in which experienced researchers have revisited villages that they have known for decades, the volume tracks surprising increases in assets in diverse locations in Tanzania. The result of these findings is a compilation which is fascinating in itself and important for the understanding of rural economies’ development data and agricultural policy.

Active Curation of Large Longitudinal Surveys: A Case Study

In this paper we take an in-depth look at the curation of a large longitudinal survey and activities and procedures involved in moving the data from its generation to the state that is needed to conduct scientific analysis. Using a case study approach, we describe how large surveys generate a range of data assets that require many decisions well before the data is considered for analysis and publication. We use the notion of active curation to describe activities and decisions about the data objects that are “live,” i.e., when they are still being collected and processed for the later stages of the data lifecycle. Our efforts illustrate a gap in the existing discussions on curation. On one hand, there is an acknowledged need for active or upstream curation as an engagement of curators close to the point of data creation. On the other hand, the recommendations on how to do that are scattered across multiple domain-oriented data efforts. In describing the complexities of active curation of survey data and providing general recommendations we aim to draw attention to the practices of active curation, stimulate the development of interoperable tools, standards, and techniques needed at the initial stages of research projects, and encourage collaborations between libraries and other academic units.