A Comprehensive Review on Biology, Genetic Improvement, Agro and Process Technology of German Chamomile (Matricaria chamomilla L.)

German chamomile (M. chamomilla) is recognized as a star herb due to its medicinal and aromatic properties. This plant is found across a wide range of climatic and soil conditions. Both the flower heads and blue essential oils of German chamomile possess several pharmacological properties of an anti-inflammatory, antimicrobial, antiseptic, antispasmodic and sedative, etc., nature, which makes it a highly sought after herb for use in many pharma and aroma industries. Chamomile tea, prepared from its flower heads, is also a well-known herbal tea for mind and body relaxation. Though it is a high-demand herb, farmers have not adopted this plant for large scale cultivation as a crop, which could improve their livelihood, due to the high cost in flower heads harvesting, loss in over mature and immature flower heads picking during harvesting, unavailability of varieties and agrotechnologies for machine harvesting, a lack of efficient process development of oil extraction and in the lack of improved stable varieties. There are many studies that have reported on the phytochemistry and pharmacological uses of chamomile, which further explore its importance in the medicine industry. Several studies are also present in the literature on its cultivation practices and plant ecology. However, studies on breeding behavior, genetic improvement, varietal development and mechanical harvesting are scarce in German chamomile. Hence, keeping in mind various aspects of farmers’ and researchers’ interest, earlier reports on taxonomy, floral biology, processing of oil extraction, active constituents, uses, agronomy, breeding challenges and opportunities in German chamomile are summarized in this review.

Biomass and Cordycepin Production by the Medicinal Mushroom Cordyceps militaris—A Review of Various Aspects and Recent Trends towards the Exploitation of a Valuable Fungus

Cordyceps militaris is an entomopathogenic ascomycete with similar pharmacological importance to that of the wild caterpillar fungus Ophiocordyceps sinensis. C. militaris has attracted significant research and commercial interest due to its content in bioactive compounds beneficial to human health and the relative ease of cultivation under laboratory conditions. However, room for improvement exists in the commercial-scale cultivation of C. militaris and concerns issues principally related to appropriate strain selection, genetic degeneration of cultures, and substrate optimization. In particular, culture degeneration—usually expressed by abnormal fruit body formation and reduced sporulation—results in important economic losses and is holding back investors and potential growers (mainly in Western countries) from further developing this highly promising sector. In the present review, the main factors that influence the generation of biomass and metabolites (with emphasis on cordycepin biosynthesis) by C. militaris are presented and evaluated in conjunction with the use of a wide range of supplements or additives towards the enhancement of fungal productivity in large-scale cultivation processes. Moreover, physiological and genetic factors that increase or reduce the manifestation of strain degeneration in C. militaris are outlined. Finally, methodologies for developing protocols to be used in C. militaris functional biology studies are discussed.

In Vitro Propagation of Easter Island Curcuma longa from Rhizome Explants Using Temporary Immersion System

Curcuma longa (C. longa) is widely known for its medicinal properties. However, the potential overexploitation of this plant raises doubts about its long-term survival on Rapa Nui. Micropropagation using a temporary immersion system (TIS) could be the basis for developing a cost-effective and highly productive method of large-scale cultivation of this plant. Our objective was to develop and refine the in vitro multiplication system for mass propagation of C. longa, and thus help restore the fragile ecosystem of Rapa Nui. Three parameters were evaluated: number of explants per flask, flask capacity, and LEDs spectrum. For each parameter evaluated, four aspects were analyzed: fresh weight per plant, number of shoots, percentage of non-sprouting explants, and the proliferation rate. The use of 30 explants per two-liter flask results in more plants with high fresh biomass than other configurations. In addition, LEDs with a red:blue ratio of 2:1 provided the best lighting conditions for in vitro propagation and positively affected C. longa proliferation and rooting. Therefore, our results show that 30 explants per two-liter flask and an LED source with a red:blue ratio of 2:1 allow a higher number of C. longa plants to be obtained using TIS.

Polyphenols leaching and seed dormancy in carob (Ceratonia siliqua L.) in relation to hot water treatment

Carob (Ceratonia siliqua L.) is a relevant element of the Mediterranean spontaneous vegetation. Moreover, it is useful in reforestation, and it is currently re-valued for sustainable agriculture in dryland areas. However, the difficulties tied to carob propagation (mainly seed dormancy) hamper its large-scale cultivation. In this paper, the effects of four seed treatments (no treatment [control], soaking at 70 °C and 90 °C in water, or in 96% sulphuric acid) on five carob genotypes germination were studied. As compared to the very low germination of untreated seeds (0–13% germination), sulphuric acid (93–100% germination) and 90 °C water soaking (from 72 to > 90% germination in four out the five genotypes) were effective in promoting germination. Soaking at 90 °C resulted in the leaching of a higher amount of total polyphenols from the genotypes seed coat as compared to soaking at 70 °C. A significant correlation (0.75**) was ascertained between polyphenol leaching of the different genotypes and germination. These results suggest that dormancy in this species is not primarily associated with seed coat hardness, as it is generally thought, but also with the release of polyphenols. Polyphenols determination of the dormant and the few non-dormant seeds of the different genotypes also seem to confirm this hypothesis since these last showed an almost halved total polyphenols content (on average 17.0) as compared to dormant ones (34.8 mg g−1 of seed FW). Further studies may determine the polyphenols involved, but also assess new, easier to carry out, seed treatments. The important role of the galactomannans on seed germination of carob is also discussed. Finally, similar studies may enhance the knowledge of dormancy processes in other Fabaceae species whose germination is positively affected by hot water treatments.

Global distribution of soapberries (Sapindus L.) habitats under current and future climate scenarios

Sapindus (Sapindus L.) is a widely distributed economically important tree genus that provides biodiesel, biomedical and biochemical products. However, with climate change, deforestation, and economic development, the diversity of Sapindus germplasms may face the risk of destruction. Therefore, utilising historical environmental data and future climate projections from the BCC-CSM2-MR global climate database, we simulated the current and future global distributions of suitable habitats for Sapindus using a Maximum Entropy (MaxEnt) model. The estimated ecological thresholds for critical environmental factors were: a minimum temperature of 0–20 °C in the coldest month, soil moisture levels of 40–140 mm, a mean temperature of 2–25 °C in the driest quarter, a mean temperature of 19–28 °C in the wettest quarter, and a soil pH of 5.6–7.6. The total suitable habitat area was 6059.97 × 104 km2, which was unevenly distributed across six continents. As greenhouse gas emissions increased over time, the area of suitable habitats contracted in lower latitudes and expanded in higher latitudes. Consequently, surveys and conservation should be prioritised in southern hemisphere areas which are in danger of becoming unsuitable. In contrast, other areas in northern and central America, China, and India can be used for conservation and large-scale cultivation in the future.

The phenomenon of degeneration of industrial Trichoderma reesei strains

Background Even if the loss of production capacity of a microorganism is said to be a serious problem in various biotechnology industries, reports in literature are rather rare. Strains of the genera Trichoderma reesei are used for large-scale production of cellulases, which are needed in food and feed, textile, paper industries and biofuel production. Results Here, we describe the phenomenon of spontaneous degeneration of T. reesei strains during large-scale cultivation. The phenotype of the degenerated population is characterized most importantly by a loss of any cellulase formation. Interestingly, promoter regions of relevant genes had a more compact chromatin in the (cel −) strains compared to productive strains. For a systematic investigation of the phenomenon a protocol for artificially induced and lab-scaled strain degeneration was developed. This workflow allows to determine the degeneration rate and thus, to compare the occurrence of a degenerated population in differently productive strains on the one hand, and to monitor the success of any strategies to prevent or decrease the degeneration on the other hand. While highly productive strains have higher degeneration rates compared to moderate producers, the degeneration can hardly be triggered in moderate producers. The observed (cel −) phenotype is not caused by a mutation in the gene encoding the essential transactivator Xyr1. The development of a non-producing population is also not triggered by any compounds released by either producing or non-producing cells. Conclusions The extent of the occurrence of a degenerated strain population relates to the production capacity of the strain and goes along with chromatin condensation in relevant promoter regions.

JA signal-mediated immunity of Dendrobium catenatum to necrotrophic Southern Blight pathogen

Background Dendrobium catenatum belongs to the Orchidaceae, and is a precious Chinese herbal medicine. In the past 20 years, D. catenatum industry has developed from an endangered medicinal plant to multi-billion dollar grade industry. The necrotrophic pathogen Sclerotium delphinii has a devastating effection on over 500 plant species, especially resulting in widespread infection and severe yield loss in the process of large-scale cultivation of D. catenatum. It has been widely reported that Jasmonate (JA) is involved in plant immunity to pathogens, but the mechanisms of JA-induced plant resistance to S. delphinii are unclear. Results In the present study, the role of JA in enhancing D. catenatum resistance to S. delphinii was investigated. We identified 2 COI1, 13 JAZ, and 12 MYC proteins in D. catenatum genome. Subsequently, systematic analyses containing phylogenetic relationship, gene structure, protein domain, and motif architecture of core JA pathway proteins were conducted in D. catenatum and the newly characterized homologs from its closely related orchid species Phalaenopsis equestris and Apostasia shenzhenica, along with the well-investigated homologs from Arabidopsis thaliana and Oryza sativa. Public RNA-seq data were investigated to analyze the expression patterns of D. catenatum core JA pathway genes in various tissues and organs. Transcriptome analysis of MeJA and S. delphinii treatment showed exogenous MeJA changed most of the expression of the above genes, and several key members, including DcJAZ1/2/5 and DcMYC2b, are involved in enhancing defense ability to S. delphinii in D. catenatum. Conclusions The findings indicate exogenous MeJA treatment affects the expression level of DcJAZ1/2/5 and DcMYC2b, thereby enhancing D. catenatum resistance to S. delphinii. This research would be helpful for future functional identification of core JA pathway genes involved in breeding for disease resistance in D. catenatum.

Scaling-Up and Semi-Continuous Cultivation of Locally Isolated Marine Microalgae Tetraselmis striata in the Subtropical Island of Gran Canaria (Canary Islands, Spain)

The goal of this study was to determine the feasibility of the large-scale cultivation of locally isolated Tetraselmis striata in different open ponds in Gran Canaria. The biomass productivities were 24.66 ± 0.53 kgDW in 32 days (28.9t/ha/year) for 8000 L indoors, 42.32 ± 0.81 kgDW in 43 days (38.8 t/ha/year) for an 8000 L pond outdoors, and 54.9 ± 0.58 kgDW in 28 days (19.6 t/ha/year) for a 45,000 L pond outdoors. The photosynthetic efficiencies were 1.45 ± 0.03% for an 8000 L pond indoors, 1.95 ± 0.04% for 8000 L outdoors. and 1.10 ± 0.01% for a 45,000 L pond outdoors. The selected strain was fast-growing (µ = 0.21 day−1) and could be rapidly scaled up to 45,000 L; it formed healthy cultures that maintained high photosynthetic activity during long-term cultivation and provided stable biomass productivities, able to grow on urea, which acted as a cheap and effective grazer control. The obtained biomass is a good source of proteins and has an FA profile with a high content of some nutritionally important fatty acids: oleic, α-linolenic (ALA) and EPA. The high ash content in the biomass (>35%) can be reduced by the implementation of additional washing steps after the centrifugation of the culture.