On the temperature in a final disposal site for high-level radioactive waste

The Site Selection Act stipulates a precautionary temperature limit of 100 ∘C on the outer surface of the containers with high-level radioactive waste (HLRW) in the final disposal site. This precautionary temperature limit should be applied in preliminary safety analyses provided that the maximum physically possible temperatures in the respective host rocks have not yet been determined due to pending research. Increasing temperatures in the deep geological underground, caused by the heat generation of the HLRW, can trigger thermal, hydraulic, mechanical, chemical and biological processes (THMCB) in the respective host rocks of a final disposal site and thus endanger safety. Furthermore, high temperatures may hamper the feasibility to retrieve and recover HLRW from a final disposal site. Such processes are described in detail in databases for features, events and processes (FEP) databases. Single components or barriers of a final disposal facility may require specific design temperatures for the preservation of their features once a concept for long-term safety of a final disposal site is established; however, the interactions of all relevant processes of a concept for a final disposal site must be considered when a specific temperature limit for the outer surface of the containers is derived. This temperature limit may vary for particular safety and final disposal concepts in the host rock: salt, clay and crystalline rock. The conclusion is that temperature limits regarding the outer surface of the containers should be derived specifically for each safety and disposal concept and should be supported by a solid safety analysis. Temperature limits without reference to specific safety concepts or the particular design of the final disposal site likely narrow down the possibilities for optimisation and could adversely affect the site selection process in finding the best suitable site.

Highly diverse flavobacterial phages isolated from North Sea spring blooms

It is generally recognized that phages are a mortality factor for their bacterial hosts. This could be particularly true in spring phytoplankton blooms, which are known to be closely followed by a highly specialized bacterial community. We hypothesized that phages modulate these dense heterotrophic bacteria successions following phytoplankton blooms. In this study, we focused on Flavobacteriia, because they are main responders during these blooms and have an important role in the degradation of polysaccharides. A cultivation-based approach was used, obtaining 44 lytic flavobacterial phages (flavophages), representing twelve new species from two viral realms. Taxonomic analysis allowed us to delineate ten new phage genera and ten new families, from which nine and four, respectively, had no previously cultivated representatives. Genomic analysis predicted various life styles and genomic replication strategies. A likely eukaryote-associated host habitat was reflected in the gene content of some of the flavophages. Detection in cellular metagenomes and by direct-plating showed that part of these phages were actively replicating in the environment during the 2018 spring bloom. Furthermore, CRISPR/Cas spacers and re-isolation during two consecutive years suggested that, at least part of the new flavophages are stable components of the microbial community in the North Sea. Together, our results indicate that these diverse flavophages have the potential to modulate their respective host populations.

Metagenome-based comparisons of decay rates and host-specificity of fecal microbial communities for improved microbial source tracking

Fecal material in the environment is a primary source of pathogens that cause waterborne diseases and affect over a billion people worldwide. Microbial source tracking (MST) assays based on single genes (e.g., 16S rRNA) do not always provide the resolution needed to attribute fecal contamination sources. In this work, we used dialysis bag mesocosms simulating a freshwater habitat that were spiked separately with cow, pig, or human feces to monitor the decay of host-specific fecal signals over time with metagenomics, traditional qPCR, and culture-based methods. Sequencing of the host fecal communities used as inocula recovered 79 non-redundant metagenome-assembled genomes (MAGs) whose abundance patterns showed that the majority of the fecal community signal was not detectable in the mesocosm metagenomes after four days. Several MAGs showed high host specificity, and thus are promising candidates for biomarkers for their respective host type. Traditional qPCR methods varied in their correlation with MAG decay kinetics. Notably, the human-specific Bacteroides assay, HF183/BFDRev, consistently under-estimated fecal pollution due to not being present in all hosts and/or primer mismatches. This work provides new insights on the persistence and decay kinetics of host-specific gut microbes in the environment and identifies several MAGs as putative biomarkers for improved MST.

Highly diverse flavobacterial phages isolated from North Sea spring blooms

It is generally recognized that phages are a mortality factor for their bacterial hosts. This could be particularly true in spring phytoplankton blooms, which are known to be closely followed by a highly specialized bacterial community. We hypothesized that phages modulate these dense heterotrophic bacteria successions following phytoplankton blooms. In this study, we focused on Flavobacteriia, because they are main responders during these blooms and have an important role in the degradation of polysaccharides. A cultivation-based approach was used, obtaining 44 lytic flavobacterial phages (flavophages), representing twelve new species from two viral realms. Taxonomic analysis allowed us to delineate ten new phage genera and ten new families, from which nine and four, respectively, had no previously cultivated representatives. Genomic analysis predicted various life styles and genomic replication strategies. A likely eukaryote-associated host habitat was reflected in the gene content of some of the flavophages. Detection in cellular metagenomes and by direct-plating showed that part of these phages were actively replicating in the environment during the 2018 spring bloom. Furthermore, CRISPR/Cas spacers and re-isolation during two consecutive years suggested that, at least part of the new flavophages are stable components of the microbial community in the North Sea. Together, our results indicate that these diverse flavophages have the potential to modulate their respective host populations.

Mistletoe Contains Higher Secondary Metabolites Than the Host Plant at the Host-Parasite Interface: Insights From Tapinanthus Globiferus Collected In Enugu, Nigeria

Background: This study aims at evaluating the phytochemicals composition at the host-parasite interfaces of parasitic plant Tapinanthus globiferus (mistletoe) and four host plants. Wood tissues of the hosts and the parasite at the host-parasite interface were collected and analyzed to determine the presence secondary metabolites. Results: The result showed that flavonoids, saponins, and glycosides were present in the plants and parasite samples. The results revealed higher concentration of flavonoids (P < 0.05) in the parasite of C. acuminata (1190.33 ± 48.23 mgQE/g) and P. macrophylla (1482.55 ± 31.35 mgQE/g) than in the host plant. Saponins was significantly (P < 0.05) higher in the parasites as compared to their respective host. Conclusion: At the host-parasite interface, significantly higher phytochemicals in the wood portion of T. globiferus was observed as compared to the host plants wood; however, the variability in phytochemical content of T. globiferus is dependent on the host. Therefore, milestoe would be a better source of bioactive compounds with high medicinal values than their host plants if explored further.

Survival of the Sawfly Athalia rosae Upon Infection by an Entomopathogenic Fungus and in Relation to Clerodanoid Uptake

Larvae of the turnip sawfly Athalia rosae are a pest of Brassicacae plants, as their feeding can cause defoliation of various crops of economic importance. The larvae and the adults of this sawfly species are known to take up different classes of chemical compounds from their respective host plants, with potentially deterrent functions against predators. In addition, compounds taken up by the adults, the clerodanoids, are known for their antimicrobial activity. These features could be a challenge to biocontrol strategies. Several natural enemies of A. rosae have been identified, targeting larval and pupal stages of A. rosae, which could potentially be used as biocontrol agents. However, targeting the adult stage of a larval pest in addition to targeting the juvenile stages may improve population control. In this study, we ask whether a strain of the entomopathogenic fungus Beauveria bassiana shows biological activity against A. rosae adults. We also investigate whether the behavior of clerodanoid uptake by the adults, which is commonly found, affects their survival in response to a B. bassiana exposure. We found a clear dose-response relationship, i.e., with increasing fungal conidia concentrations survival of A. rosae decreased. However, there was only a low incidence of mycelial growth and sporulation from A. rosae cadavers, indicating that either the fungus is not successfully developing inside this host, or it is not able to re-emerge from it. Clerodanoid uptake decreased the survival of healthy adults; however, it did not increase their survival to B. bassiana. Our results revealed that this strain of B. bassiana if applied alone is probably not suitable for biocontrol of this sawfly species, because A. rosae showed a high baseline resistance against this fungus. The behavior of clerodanoid uptake is unlikely to have evolved as a defense against this entomopathogenic fungus.

Transcriptome of nasopharyngeal samples from COVID-19 patients and a comparative analysis with other SARS-CoV-2 infection models reveal disparate host responses against SARS-CoV-2

Background Although it is becoming evident that individual’s immune system has a decisive influence on SARS-CoV-2 disease progression, pathogenesis is largely unknown. In this study, we aimed to profile the host transcriptome of COVID-19 patients from nasopharyngeal samples along with virus genomic features isolated from respective host, and a comparative analyses of differential host responses in various SARS-CoV-2 infection systems. Results Unique and rare missense mutations in 3C-like protease observed in all of our reported isolates. Functional enrichment analyses exhibited that the host induced responses are mediated by innate immunity, interferon, and cytokine stimulation. Surprisingly, induction of apoptosis, phagosome, antigen presentation, hypoxia response was lacking within these patients. Upregulation of immune and cytokine signaling genes such as CCL4, TNFA, IL6, IL1A, CCL2, CXCL2, IFN, and CCR1 were observed in lungs. Lungs lacked the overexpression of ACE2 as suspected, however, high ACE2 but low DPP4 expression was observed in nasopharyngeal cells. Interestingly, directly or indirectly, viral proteins specially non-structural protein mediated overexpression of integrins such as ITGAV, ITGA6, ITGB7, ITGB3, ITGA2B, ITGA5, ITGA6, ITGA9, ITGA4, ITGAE, and ITGA8 in lungs compared to nasopharyngeal samples suggesting the possible way of enhanced invasion. Furthermore, we found comparatively highly expressed transcription factors such as CBP, CEBP, NFAT, ATF3, GATA6, HDAC2, TCF12 which have pivotal roles in lung injury. Conclusions Even though this study incorporates a limited number of cases, our data will provide valuable insights in developing potential studies to elucidate the differential host responses on the viral pathogenesis in COVID-19, and incorporation of further data will enrich the search of an effective therapeutics.

Populism versus Technocracy? Populist Responses to the Technocratic Nature of the EU

While populism and technocracy have attracted enormous scientific attention in recent years, surprisingly how the two concepts relate to each other has rarely been investigated. Looking at the case of the EU, we investigate how populist parties position themselves in relation to technocracy in general and the technocratic nature of EU institutions in particular. In a first theoretical step, we identify the core elements, modes of governance, and policy output of technocratic governance and use them to derive potential responses of populist parties. In the empirical part, we investigate these aspects of technocracy by applying quantitative and qualitative approaches using the 2019 European election manifestos of 12 populist parties. We show that left- and right-wing populist parties articulate anti-technocratic positions, particularly regarding the core elements of technocratic governance. The concrete technocratic critique differs regarding the respective host ideology. However, within the group of hybrid populist parties, ANO 2011 and GERB appear not to have a critical stance towards technocracy and thus can be classified as technocratic populist parties.

Major Fungi Diseases of Cashew Trees (Anacardium occidental L.) in Cameroon

The culture of cashew (Anacardium occidentale L.) is increasing in the Far North Cameroon. But, the productivity is threatened by the development of diseases in orchads. Therefore, the aim of this study is to identify diseases and pathogens involved in cashew cultivation. The diseases were identified under the basis of the identification keys. The fungal structures were characterized using an optical microscope and the pathogenicity test were carried out. Incidence, severity and prevalence of diseases were assessed in the dry season and the rainy season. Seven diseases and seven pathogens have been identified: anthracnose (Colletotrichum gloeosporioides Penz), pestalotia leaf spot (Pestalotia heterocornis), alternaria (Alternaria solani), drying of buds (Colletotrichum gloeosporioides, Phomopsus anacardii and Curvularia lunata), dieback (Colletotrichum sp. and Lasiodiplodia sp.), blight of leaves (Pestalotia heterocornis and Colletotrichum gloeosporioides) and powdery mildew (Oidium anacardii Noack). Whatever the season; anthracnose, pestalotia leaf spot an drying of buds are diseases with higher incidence (more than 85, 60 and 75% respectively) and higher prevalence. The severity of the diseases varied according to the location and season. Pathogenicity test revealed that all the test fungi were pathogenic to their respective host parts except cashew powder mildew and alternaria. The results of this study represent database for implementation of integrated disease management approaches in Cameroon.

Host Specificity and Differential Pathogenicity of Pectobacterium Strains from Dicot and Monocot Hosts

Recent phylogenetic studies have transferred certain isolates from monocot plants previously included in the heterogeneous group of Pectobacteriumcarotovorum (Pc) to a species level termed Pectobacterium aroidearum. The specificity of Pectobacterium associated infections had received less attention, and may be of high scientific and economic importance. Here, we have characterized differential responses of Pectobacterium isolates from potato (WPP14) and calla lily (PC16) on two typical hosts: Brassica oleracea var. capitata (cabbage) a dicot host; and Zantedeschia aethiopica (calla lily) a monocot host. The results revealed clear host specific responses following infection with the two bacterial strains. This was demonstrated by differential production of volatile organic compounds (VOCs) and the expression of plant defense-related genes (pal, PR-1, lox2, ast). A related pattern was observed in bacterial responses to each of the host’s extract, with differential expression of virulence-related determinants and genes associated with quorum-sensing and plant cell wall-degrading enzymes. The differences were associated with each strain’s competence on its respective host.