scholarly journals Spatio-temporal parameters for optical probing of neuronal activity

2021 ◽  
Author(s):  
Vincent R. Daria ◽  
Michael Lawrence Castañares ◽  
Hans-A. Bachor
Keyword(s):  
Neuronal Activity ◽  
Brain Regions ◽  
Mammalian Brain ◽  
Neuronal Circuits ◽  
Temporal Parameters ◽  
Brain Functions ◽  
Temporal Properties ◽  
Optical Probing ◽  
Spatio Temporal ◽  
The Brain

AbstractThe challenge to understand the complex neuronal circuit functions in the mammalian brain has brought about a revolution in light-based neurotechnologies and optogenetic tools. However, while recent seminal works have shown excellent insights on the processing of basic functions such as sensory perception, memory, and navigation, understanding more complex brain functions is still unattainable with current technologies. We are just scratching the surface, both literally and figuratively. Yet, the path towards fully understanding the brain is not totally uncertain. Recent rapid technological advancements have allowed us to analyze the processing of signals within dendritic arborizations of single neurons and within neuronal circuits. Understanding the circuit dynamics in the brain requires a good appreciation of the spatial and temporal properties of neuronal activity. Here, we assess the spatio-temporal parameters of neuronal responses and match them with suitable light-based neurotechnologies as well as photochemical and optogenetic tools. We focus on the spatial range that includes dendrites and certain brain regions (e.g., cortex and hippocampus) that constitute neuronal circuits. We also review some temporal characteristics of some proteins and ion channels responsible for certain neuronal functions. With the aid of the photochemical and optogenetic markers, we can use light to visualize the circuit dynamics of a functioning brain. The challenge to understand how the brain works continue to excite scientists as research questions begin to link macroscopic and microscopic units of brain circuits.

scholarly journals STAB: a spatio-temporal cell atlas of the human brain

2020 ◽  
Vol 49 (D1) ◽  
pp. D1029-D1037
Author(s):  
Liting Song ◽  
Shaojun Pan ◽  
Zichao Zhang ◽  
Longhao Jia ◽  
Wei-Hua Chen ◽  
...  
Keyword(s):  
Human Brain ◽  
Single Cell ◽  
Temporal Dynamics ◽  
Cell Types ◽  
Brain Regions ◽  
Molecular Characteristics ◽  
Great Effort ◽  
Brain Functions ◽  
Spatio Temporal ◽  
The Brain

Abstract The human brain is the most complex organ consisting of billions of neuronal and non-neuronal cells that are organized into distinct anatomical and functional regions. Elucidating the cellular and transcriptome architecture underlying the brain is crucial for understanding brain functions and brain disorders. Thanks to the single-cell RNA sequencing technologies, it is becoming possible to dissect the cellular compositions of the brain. Although great effort has been made to explore the transcriptome architecture of the human brain, a comprehensive database with dynamic cellular compositions and molecular characteristics of the human brain during the lifespan is still not available. Here, we present STAB (a Spatio-Temporal cell Atlas of the human Brain), a database consists of single-cell transcriptomes across multiple brain regions and developmental periods. Right now, STAB contains single-cell gene expression profiling of 42 cell subtypes across 20 brain regions and 11 developmental periods. With STAB, the landscape of cell types and their regional heterogeneity and temporal dynamics across the human brain can be clearly seen, which can help to understand both the development of the normal human brain and the etiology of neuropsychiatric disorders. STAB is available at http://stab.comp-sysbio.org.

scholarly journals An architectonic type principle in the development of laminar patterns of cortico-cortical connections

2021 ◽  
Author(s):  
Sarah F. Beul ◽  
Alexandros Goulas ◽  
Claus C. Hilgetag
Keyword(s):  
Structural Connectivity ◽  
Macaque Monkey ◽  
Brain Regions ◽  
Adult Brain ◽  
Mammalian Brain ◽  
Cortical Connections ◽  
Cortical Projections ◽  
Structural Connections ◽  
High Degree ◽  
The Brain

AbstractStructural connections between cortical areas form an intricate network with a high degree of specificity. Many aspects of this complex network organization in the adult mammalian cortex are captured by an architectonic type principle, which relates structural connections to the architectonic differentiation of brain regions. In particular, the laminar patterns of projection origins are a prominent feature of structural connections that varies in a graded manner with the relative architectonic differentiation of connected areas in the adult brain. Here we show that the architectonic type principle is already apparent for the laminar origins of cortico-cortical projections in the immature cortex of the macaque monkey. We find that prenatal and neonatal laminar patterns correlate with cortical architectonic differentiation, and that the relation of laminar patterns to architectonic differences between connected areas is not substantially altered by the complete loss of visual input. Moreover, we find that the degree of change in laminar patterns that projections undergo during development varies in proportion to the relative architectonic differentiation of the connected areas. Hence, it appears that initial biases in laminar projection patterns become progressively strengthened by later developmental processes. These findings suggest that early neurogenetic processes during the formation of the brain are sufficient to establish the characteristic laminar projection patterns. This conclusion is in line with previously suggested mechanistic explanations underlying the emergence of the architectonic type principle and provides further constraints for exploring the fundamental factors that shape structural connectivity in the mammalian brain.

scholarly journals Sex in the brain: hormones and sex differences

2016 ◽  
Vol 18 (4) ◽  
pp. 373-383 ◽  
Keyword(s):  
Sex Differences ◽  
Sex Hormones ◽  
Genetic Factors ◽  
Motor Coordination ◽  
Brain Regions ◽  
New Era ◽  
Brain Functions ◽  
Opioid Sensitivity ◽  
Males And Females ◽  
The Brain

Contrary to popular belief, sex hormones act throughout the entire brain of both males and females via both genomic and nongenomic receptors. Many neural and behavioral functions are affected by estrogens, including mood, cognitive function, blood pressure regulation, motor coordination, pain, and opioid sensitivity. Subtle sex differences exist for many of these functions that are developmentally programmed by hormones and by not yet precisely defined genetic factors, including the mitochondrial genome. These sex differences, and responses to sex hormones in brain regions and upon functions not previously regarded as subject to such differences, indicate that we are entering a new era in our ability to understand and appreciate the diversity of gender-related behaviors and brain functions.

Mesozoic mammals and early mammalian brain diversity

2003 ◽  
Vol 26 (5) ◽  
pp. 556-557 ◽  
Author(s):  
Emmanuel Gilissen ◽  
Thierry Smith
Keyword(s):  
Middle Ear ◽  
Brain Regions ◽  
Mammalian Brain ◽  
Fossil Remains ◽  
Ear Ossicles ◽  
Mesozoic Mammals ◽  
Brain Expansion ◽  
The Relationship ◽  
The Brain

Fossil remains witness the relationship between the appearance of the middle ear and the expansion of the brain in early mammals. Nevertheless, the lack of detachment of ear ossicles in the mammaliaform Morganucodon, despite brain enlargement, points to other factors that triggered brain expansion in early mammals. Moreover, brain expansion in some early mammalian groups seems to have favored brain regions other than the cortex.

scholarly journals Maternal Dietary Docosahexaenoic Acid Alters Lipid Peroxidation Products and (n-3)/(n-6) Fatty Acid Balance in Offspring Mice

Metabolites ◽  
2019 ◽  
Vol 9 (3) ◽  
pp. 40 ◽  
Author(s):  
Bo Yang ◽  
Runting Li ◽  
Taeseon Woo ◽  
Jimmy Browning ◽  
Hailong Song ◽  
...  
Keyword(s):  
Lipid Peroxidation ◽  
Docosahexaenoic Acid ◽  
Maternal Diet ◽  
Brain Regions ◽  
Diet Group ◽  
Mammalian Brain ◽  
Enzymatic Reactions ◽  
Functional Changes ◽  
Lipid Peroxidation Products ◽  
Brain Functions

The abundance of docosahexaenoic acid (DHA) in the mammalian brain has generated substantial interest in the search for its roles in regulating brain functions. Our recent study with a gene/stress mouse model provided evidence to support the ability for the maternal supplement of DHA to alleviate autism-associated behavior in the offspring. DHA and arachidonic acid (ARA) are substrates of enzymatic and non-enzymatic reactions, and lipid peroxidation results in the production of 4-hydroxyhexenal (4-HHE) and 4-hydroxynonenal (4-HNE), respectively. In this study, we examine whether a maternal DHA-supplemented diet alters fatty acids (FAs), as well as lipid peroxidation products in the pup brain, heart and plasma by a targeted metabolite approach. Pups in the maternal DHA-supplemented diet group showed an increase in DHA and a concomitant decrease in ARA in all brain regions examined. However, significant increases in 4-HHE, and not 4-HNE, were found mainly in the cerebral cortex and hippocampus. Analysis of heart and plasma showed large increases in DHA and 4-HHE, but a significant decrease in 4-HNE levels only in plasma. Taken together, the DHA-supplemented maternal diet alters the (n-3)/(n-6) FA ratio, and increases 4-HHE levels in pup brain, heart and plasma. These effects may contribute to the beneficial effects of DHA on neurodevelopment, as well as functional changes in other body organs.

Effective brain connectivity estimation between active brain regions in autism using the dual Kalman-based method

2020 ◽  
Vol 65 (1) ◽  
pp. 23-32
Author(s):  
Mehdi Rajabioun ◽  
Ali Motie Nasrabadi ◽  
Mohammad Bagher Shamsollahi ◽  
Robert Coben
Keyword(s):  
Resting State ◽  
Brain Connectivity ◽  
Effective Connectivity ◽  
Estimation Error ◽  
Brain Regions ◽  
Estimation Methods ◽  
Estimation Errors ◽  
Normal Children ◽  
Brain Functions ◽  
The Brain

AbstractBrain connectivity estimation is a useful method to study brain functions and diagnose neuroscience disorders. Effective connectivity is a subdivision of brain connectivity which discusses the causal relationship between different parts of the brain. In this study, a dual Kalman-based method is used for effective connectivity estimation. Because of connectivity changes in autism, the method is applied to autistic signals for effective connectivity estimation. For method validation, the dual Kalman based method is compared with other connectivity estimation methods by estimation error and the dual Kalman-based method gives acceptable results with less estimation errors. Then, connectivities between active brain regions of autistic and normal children in the resting state are estimated and compared. In this simulation, the brain is divided into eight regions and the connectivity between regions and within them is calculated. It can be concluded from the results that in the resting state condition the effective connectivity of active regions is decreased between regions and is increased within each region in autistic children. In another result, by averaging the connectivity between the extracted active sources of each region, the connectivity between the left and right of the central part is more than that in other regions and the connectivity in the occipital part is less than that in others.

Lipopolysaccharide effects on neuronal activity in rat basal forebrain and hypothalamus during sleep and waking

2000 ◽  
Vol 278 (3) ◽  
pp. R620-R627
Author(s):  
Xinzheng Xi ◽  
Linda A. Toth
Keyword(s):  
Neuronal Activity ◽  
Basal Forebrain ◽  
Preoptic Area ◽  
Intraperitoneal Administration ◽  
Brain Regions ◽  
Neuronal Firing ◽  
Firing Patterns ◽  
Firing Rates ◽  
Neuronal Mechanisms ◽  
The Brain

Peripheral administration of lipopolysaccharide (LPS) is associated with alterations in sleep and the electroencephalogram. To evaluate potential neuronal mechanisms for the somnogenic effects of LPS administration, we used unanesthetized rats to survey the firing patterns of neurons in various regions of rat basal forebrain (BF) and hypothalamus during spontaneous sleep and waking and during the epochs of sleep and waking that occurred after the intraperitoneal administration of LPS. In the brain regions studied, LPS administration was associated with altered firing rates in 39% of the neurons examined. A larger proportion of LPS-responsive units showed vigilance-related alterations in firing rates compared with nonresponsive units. Approximately equal proportions of LPS-responsive neurons showed increased and decreased firing rates after LPS administration, with some units in the lateral preoptic area of the hypothalamus showing particularly robust increases. These findings are consistent with other studies showing vigilance-related changes in neuronal activity in various regions of BF and hypothalamus and further demonstrate that peripheral LPS administration alters neuronal firing rates in these structures during both sleep and waking.

scholarly journals Acetylcholinesterase, Specific Acetylcholinesterase and Total Protein Concentrations in the Brain Regions of Broiler Chickens Fed Dietary Monosodium Glutamate

2019 ◽  
Vol 7 (6) ◽  
pp. 883
Author(s):  
Olumuyiwa Joseph Olarotimi ◽  
Imoleayo Sarah Oladeji ◽  
Olufemi Adesanya Adu ◽  
Francis Ayodeji Gbore
Keyword(s):  
Total Protein ◽  
Broiler Chickens ◽  
Optic Lobe ◽  
Monosodium Glutamate ◽  
Acetylcholinesterase Activity ◽  
Brain Regions ◽  
Pineal Body ◽  
Olfactory Lobe ◽  
Brain Functions ◽  
The Brain

The study was carried out to examine the effect of varied levels of dietary monosodium glutamate on acetylcholinesterase, specific acetylcholinesterase and total protein concentrations in the brain regions of broiler chickens. Three hundred (300) day – old unsexed Abor – acre chickens were randomly assigned to diets: A, B, C, D, E and F containing 0.00, 0.25, 0.50, 0.75, 1.00 and 1.25 g/kg MSG respectively. Each treatment was replicated 5 times with 10 birds per replicate. The birds were fed ad – libitum and provided with clean water for 8 weeks (56 days) after which 2 birds per replicates were slaughtered. The brains were removed, dissected into different regions comprising of the olfactory lobe, pineal body, optic lobe, cerebellum and the medulla oblongata. The different parts of the brain were homogenized to determine the acetylcholinesterase and total protein which were also used in the assessment of the specific acetylcholinesterase of the brain. No significant differences were observed in the acetylcholinesterase activity of the olfactory lobe, pineal body, optic lobe, cerebellum except for the medulla. Likewise, the dietary monosodium glutamate did not influence the activities of the total protein and specific acetylcholinesterase of the olfactory lobe portion of the brain. The dietary monosodium glutamate exerted significant effects on the total protein of other brain parts studied and which invariably resulted in significant changes in the specific acetylcholinesterase of the optic lobe, cerebellum and medulla except for the optic lobe. This study revealed that monosodium glutamate added to broilers diet above 0.75 g/kg significantly altered the concentration of the brain acetylcholinesterase, total protein and specific acetylcholinesterase thereby impaired brain functions.

Spatio-temporal properties of the brain activity during visual infrequent target detection: a neuromagnetic study

NeuroImage ◽  
2001 ◽  
Vol 13 (6) ◽  
pp. 895
Author(s):  
Sunao Iwaki ◽  
Naoya Hirata ◽  
Mitsuo Tonoike ◽  
Masahiko Yamaguchi ◽  
Isao Kaetsu
Keyword(s):  
Target Detection ◽  
Brain Activity ◽  
Temporal Properties ◽  
Spatio Temporal ◽  
The Brain

Stimulation: History of Brain Mapping

2019 ◽  
Author(s):  
Henry A. Buchtel ◽  
Giovanni Berlucchi
Keyword(s):  
Motor Cortex ◽  
Neuronal Activity ◽  
Brain Mapping ◽  
Subcortical Structures ◽  
Electrical Discharges ◽  
New Techniques ◽  
Brain Functions ◽  
History Of ◽  
The Brain ◽  
Stimulation Of

The history of brain mapping using stimulation is long and nonlinear. It started with very imprecise stimulation of the brain using electrical discharges in the early 1800s. With better control of the electrical sources and more precise application of the stimuli, the real mapping of brain functions began in the 1870s, starting with the easily observed effects of activation of neurons in the motor cortex. Work since then has shown that the cerebral mantle is highly specialized and, more interesting, that experience and practice can cause significant alterations of the organization of neurons in the cortex and subcortical structures. New techniques to alter neuronal activity are being developed each year and will certainly increase our understanding of how the brain is organized and how it can be modified.

Sign in / Sign up

Export Citation Format

Share Document