scholarly journals Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Kaoru Nishimura ◽  
Elisa Dioguardi ◽  
Shunsuke Nishio ◽  
Alessandra Villa ◽  
Ling Han ◽  
...  
2019 ◽  
Vol 63 (3) ◽  
pp. 377-387 ◽  
Author(s):  
Bram Piersma ◽  
Ruud A. Bank

Abstract The hallmark of fibrosis is an excessive accumulation of collagen, ultimately leading to organ failure. It has become evident that the deposited collagen also exhibits qualitative modifications. A marked modification is the increased cross-linking, leading to a stabilization of the collagen network and limiting fibrosis reversibility. Not only the level of cross-linking is increased, but also the composition of cross-linking is altered: an increase is seen in hydroxyallysine-derived cross-links at the expense of allysine cross-links. This results in irreversible fibrosis, as collagen cross-linked by hydroxyallysine is more difficult to degrade. Hydroxyallysine is derived from a hydroxylysine in the telopeptides of collagen. The expression of lysyl hydroxylase (LH) 2 (LH2), the enzyme responsible for the formation of telopeptidyl hydroxylysine, is universally up-regulated in fibrosis. It is expected that inhibition of this enzyme will lead to reversible fibrosis without interfering with the normal repair process. In this review, we discuss the molecular basis of collagen modifications and cross-linking, with an emphasis on LH2-mediated hydroxyallysine cross-links, and their implications for the pathogenesis and treatment of fibrosis.


2009 ◽  
Vol 2009 ◽  
pp. 1-6 ◽  
Author(s):  
Jennifer A. Winn ◽  
R. Esten Mason ◽  
Adriana L. Robbins ◽  
William L. Rooney ◽  
Dirk B. Hays

Compared with other cereal grains, Sorghum bicolor shows lower protein digestibility. The low digestibility is thought to result from disulfide cross linking in the β- and γ-kafirins. In contrast, the single recessive high digestibility/high lysine content (HD) mutation which confers greater grain digestibility exists in sorghum that is thought to result from reduced accumulation of γ-kafirin that allows greater access to the high digestible α-kafarin fraction. In an effort to both clearly define the molecular basis for the HD trait and develop tools to improve the introgression of this difficult-to-screen trait, this study focuses on mapping the QTLs linked to this trait. While the HD trait has been defined as a single recessive gene, our results uncovered that two major QTLs on chromosome 1 are associated with protein digestibility—one QTL (locus 1 from the HD parent) unfavorably affects digestibility and one QTL (locus 2 from the HD parent) only 20 cM away favorably affects digestibility. A contrast analysis between genotypic groups at these two loci shows that a higher level of protein digestibility may be obtained when this linkage in repulsion is broken and favorable alleles are allowed to recombine.


2019 ◽  
Author(s):  
Taeyang Jung ◽  
Baehyun Shin ◽  
Giorgio Tamo ◽  
Hyeongju Kim ◽  
Ravi Vijayvargia ◽  
...  

ABSTRACTThe polyQ-expansion at the N-terminus of huntingtin (HTT) is the prime cause of Huntington’s disease. The recent cryo-EM structure of HTT with HAP40 provides information on the protein’s prominent HEAT-repeats. Here, we present analyses of the impact of polyQ-length on the conformation of HTT by cryo-EM, the domain-interactions by cross-linking mass spectrometry and the phosphorylation of HTT. The cryo-EM analysis of normal (Q23-) and disease (Q78-) type HTTs in their apo forms shows that the structures of apo HTTs significantly differ from the structure of HTT-HAP40, and that the polyQ expansion induces global structural changes consisting of significant domain movements of the C-HEAT domain relative to the N-HEAT domain. In addition, we show that the polyQ-expansion alters the phosphorylation pattern across the full-length HTT and that the specific phosphorylation (Ser2116p) in turn affects the global structure of HTT, which influences the activity of polyQ-expanded HTT. These results provide a molecular basis for the effect of the N-terminal polyQ segment on HTT structure and activity, that may be important for the cell-selective toxicity of mutant HTT.


2020 ◽  
Author(s):  
Hongxin Guan ◽  
Jiaqi Fu ◽  
Ting Yu ◽  
Zhao-Xi Wang ◽  
Ninghai Gan ◽  
...  

SummaryThe Legionella pneumophila effector MavC is a transglutaminase that carries out atypical ubiquitination of the ubiquitin (Ub) E2 conjugation enzyme UBE2N by catalyzing the formation of an isopeptide bond between Gln40 of Ub and Lys92 (or to a less extent, Lys94) of UBE2N, which results in inhibition of UBE2N signaling in the NF-κB pathway. In the absence of UBE2N, MavC deamidates Ub at Gln40 or catalyzes self-ubiquitination. However, the mechanisms underlying these enzymatic activities of MavC are not fully understood at molecular level. In this study, we obtained the structure of the MavC-UBE2N-Ub ternary complex that represents a snapshot of covalent cross-linking of UBE2N and Ub catalyzed by MavC. The structure reveals the unique way by which the cross-linked catalytic product UBE2N-Ub binds mainly to the Insertion and the Tail domains of MavC prior to its release. Based on our structural, biochemical and mutational analyses, we proposed the catalytic mechanism for both the deamidase and the transglutaminase activities of MavC. Finally, by comparing the structures of MavC and MvcA, the homologous protein that reverses MavC-induced UBE2N ubiquitination, we identified several key regions of the two proteins responsible for their opposite enzymatic activity. Our results provide insights into the mechanisms for substrate recognition and ubiquitination mediated by MavC as well as explanations for the opposite activity of MavC and MvcA.


2019 ◽  
Author(s):  
Kaoru Nishimura ◽  
Elisa Dioguardi ◽  
Shunsuke Nishio ◽  
Alessandra Villa ◽  
Ling Han ◽  
...  

AbstractInteraction between sperm and the egg zona pellucida (ZP) is the first step of mammalian fertilization, and ZP component ZP1 is important for fertility by covalently cross-linking ZP filaments into a matrix. Like ZP4, a structurally-related subunit absent in the mouse, ZP1 is predicted to contain an N-terminal ZP-N domain of unknown function. Characterization of ZP1 proteins carrying mutations from infertile patients suggests that, unlike in the mouse, filament cross-linking by ZP1 is crucial for human ZP assembly. We map the function of ZP1 to its ZP-N1 domain and determine crystal structures of ZP-N1 homodimers from a chicken homolog of ZP1. These reveal that ZP filament cross-linking is highly plastic and can be modulated by ZP1 fucosylation and, potentially, zinc sparks. Moreover, we show that ZP4 ZP-N1 forms non-covalent homodimers in chicken but not human. Together, these data identify human ZP1 cross-links as a promising target for non-hormonal contraception.


Blood ◽  
2007 ◽  
Vol 110 (11) ◽  
pp. 1134-1134
Author(s):  
Laurent Vallat ◽  
Cedric Pionneau ◽  
Frederic Jacob ◽  
Frederic Davi ◽  
Veronique Leblond ◽  
...  

Abstract Unraveling the molecular basis for the different functional consequences of BCR cross-linking is essential to understand the leukemogenesis process of CLL. There is increasing evidence that an antigen driven process is crucial in CLL proliferation, based on restriction of the IgVH repertory as well as shared antigen-binding motifs used by mutated or unmutated CLL B-cells. BCR activation leads to a signaling cascade reinforced in the more aggressive CLL form by the ZAP70 protein tyrosine kinase and constitutive phosphorylation of HS1 protein. We have previously shown, using gene expression profiling over time, that crosslinking of the BCR induces a specific temporal gene expression program in the leukemic cells, leading to a complex balance disorder between proliferation and cell death. These results demonstrated a core BCR gene expression shared among all B cell (and across species). Furthermore, each cell category (healthy B-cells, indolent and aggressive CLL cells) also showed a specific temporal gene expression after BCR cross-linking. This analysis has revealed complex expression disorder of multiple genes coding proteins involved in proliferation and death regulation (Vallat et al. Blood 07). To further investigate the functional consequences of BCR cross-linking we also examined modulation of the BCR proteome, since a dynamic description of the BCR functional consequences in CLL cells would not be complete without parallel temporal proteomic analysis. We now have cross-linked the BCR in freshly isolated B-cells from CLL patients. We have isolated total proteins at 2 early, one intermediate and a later time point 30 min later than the time points selected in the previous mRNA experiments. At each analysis time point both stimulated and control unstimulated cells were examined. A 2D electrophoresis analysis (pH 3–10, 150–20 kDa) revealed between 1100 and 1800 (mean 1400) polypetidic spots at each time point after BCR engagement. A total of 600 different polypeptides show a specific pattern of expression over time after stimulation, up- (450 polypeptides) or down-regulated (150 polypeptides). We are currently identifying these different proteins of interest by mass spectrometry (Maldi-TOF and LC-MS/MS) and learning these results in parallel of the previous genomic results. Preliminary results show the complementarity of the two analyses. Many of the proteins identified correspond to changes in mRNA belonging to the temporal gene program previously described after BCR engagement, thereby validating the gene expression data at the protein level, but some proteins show a specific temporal pattern of expression whereas their corresponding coding mRNA were not present in the temporal gene expression. Such complementarities in this dynamical approach allow us to refine the molecular basis for the functional BCR cross-linking consequences in CLL and to identify putative therapeutic targets for intervention in this disease. Ongoing experiments are examining the consequences of intervention to alter expression of critical components within the functional consequences of BCR cross-linking in CLL, and potentially the consequences of antigen driven leukemogenesis.


Cells ◽  
2020 ◽  
Vol 9 (1) ◽  
pp. 136
Author(s):  
Christine Piotrowski ◽  
Rocco Moretti ◽  
Christian H. Ihling ◽  
André Haedicke ◽  
Thomas Liepold ◽  
...  

Exploring the interactions between the Ca2+ binding protein calmodulin (CaM) and its target proteins remains a challenging task. Members of the Munc13 protein family play an essential role in short-term synaptic plasticity, modulated via the interaction with CaM at the presynaptic compartment. In this study, we focus on the bMunc13-2 isoform expressed in the brain, as strong changes in synaptic transmission were observed upon its mutagenesis or deletion. The CaM–bMunc13-2 interaction was previously characterized at the molecular level using short bMunc13-2-derived peptides only, revealing a classical 1–5–10 CaM binding motif. Using larger protein constructs, we have now identified for the first time a novel and unique CaM binding site in bMunc13-2 that contains an N-terminal extension of a classical 1–5–10 CaM binding motif. We characterize this motif using a range of biochemical and biophysical methods and highlight its importance for the CaM–bMunc13-2 interaction.


Cell ◽  
1999 ◽  
Vol 98 (4) ◽  
pp. 537-546 ◽  
Author(s):  
Kristina Djinović-Carugo ◽  
Paul Young ◽  
Mathias Gautel ◽  
Matti Saraste

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