scholarly journals Dam effect confirmation on weaning weight of Boer Goat crosses in Indonesia

2021 ◽  
Vol 902 (1) ◽  
pp. 012001
Author(s):  
T Nugroho ◽  
A Nurhidayati ◽  
N Widyas ◽  
S Prastowo
Keyword(s):  
Fixed Effects ◽  
Mixed Model ◽  
Random Effect ◽  
Fixed Effect ◽  
Weaning Weight ◽  
Boer Goat ◽  
Significant Difference ◽  
Weight Trait ◽  
Observation Results ◽  
Birth Type

Abstract This study aimed to confirm the present of dam effect on weaning weight trait of Boer goat crosses. A total of 1081 weaning weight records (standardized to 77 days) from 527 does and 16 bucks were analyzed. Data were derived from Boer, Boerja F1 (Boer 3 × Jawarandu ?), and Boerja F2 (Boer 3 × Boerja F1 ?). Two statistic models namely Model 1 and Model 2 were compared using F-test for overall significance. Model 1 is Analysis of Variance (ANOVA) which consist only fixed effect as factor, while Model 2 is mixed model which includes fixed effect as factor and dam as a random effect. The fixed effects in both models are buck, doe type, parity of the dam, sex of kid, birth type, and year of observation. Results showed that buck, doe type, sex, birth type, and observation year affect significantly (P<0.05) to weaning weight, while parity had no effect (P=0.53). Based on the model’s comparison, there was a significant difference (P<0.05) between Model 1 and Model 2. Therefore, it is confirmed the present of dam effect on the weaning weight trait of Boer goat crosses in the studied population.

scholarly journals Exercise-induced hypoalgesia in women with varying levels of menstrual pain

2018 ◽  
Vol 18 (2) ◽  
pp. 303-310 ◽  
Author(s):  
Mervyn Travers ◽  
Penny Moss ◽  
William Gibson ◽  
Dana Hince ◽  
Sheree Yorke ◽  
...  
Keyword(s):  
Fixed Effects ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Random Effect ◽  
Activity Levels ◽  
Menstrual Pain ◽  
Isometric Handgrip ◽  
Pressure Pain Thresholds ◽  
Significant Difference ◽  
Exercise Induced

Abstract Background and aims: Exercise-induced hypoalgesia (EIH) is a well-established phenomenon in pain-free individuals that describes a decrease in pain sensitivity after an acute bout of exercise. The EIH response has been demonstrated to be sub-optimal in the presence of persisting pain. Menstrual pain is a common recurrent painful problem with many women experiencing high levels of pain each cycle. However, the EIH response has not been examined in a cohort of women with high levels of menstrual pain. This research aimed to examine whether EIH manifests differently in women with varying levels of menstrual pain. The primary hypothesis was that women with high levels of menstrual pain would demonstrate compromised EIH. Secondary aims were to explore relationships between EIH and emotional state, sleep quality, body mass index (BMI) or physical activity levels. Methods: Pressure pain thresholds (PPT) were measured in 64 participants using a digital handheld algometer before and after a submaximal isometric-handgrip exercise. EIH index was compared between low (VAS 0–3), moderate (VAS 4–7) and high (VAS 8–10) pain groups, using a linear mixed model analysis with participant as a random effect, and site, menstrual pain category and the interaction between the two, as fixed effects. Results: EIH was consistently induced in all groups. However, there was no statistically significant difference between the pain groups for EIH index (p=0.835) or for any co-variates (p>0.05). Conclusions: EIH was not found to differ between women who report regular low, moderate or high levels of menstrual pain, when measured at a point in their menstrual cycle when they are pain free. Implications: This study provides insight that EIH does not vary in women with differing levels of menstrual pain when they are not currently experiencing pain. The current findings indicate that, although menstrual pain can involve regular episodes of high pain levels, it may not be associated with the same central nervous system dysfunctions as seen in sustained chronic pain conditions.

scholarly journals 163 Annual differences in fecal egg counts in a forage-based ram test

2019 ◽  
Vol 97 (Supplement_3) ◽  
pp. 172-172
Author(s):  
Morgan Van Davelaar ◽  
David R Notter ◽  
D Lee Wright ◽  
Anna M Zajac ◽  
Scott P Greiner ◽  
...  
Keyword(s):  
Fixed Effects ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Negative Binomial ◽  
Random Effect ◽  
Summer Precipitation ◽  
Parasite Load ◽  
Least Square ◽  
Birth Type ◽  
Normally Distributed

Abstract The objective was to determine the magnitude of yearly differences in parasite load in growing ram lambs. Data were obtained from the Southwest Virginia Agriculture Research and Extension Center in Glade Spring, VA. The center conducts a forage-based ram growth test during the summer where rams also undergo a parasite challenge. Data consisted of 488 Katahdin rams tested from 2012 to 2018. Rams were dewormed at delivery, and at the start of the test, each ram received an oral dose of 5,000 H. contortus larvae adjusted for body weight. Fecal egg count was measured 70 d later when rams were on average (SD) 200 (18) d old. Fecal egg counts were not normally distributed. The Box-Cox procedure indicated that a log transformation was appropriate, but the residuals were not normally distributed for several linear models. A zero-inflated negative binomial generalized linear mixed model was used for data analysis with the glmmTMB package in R. The model included fixed effects of centered and scaled weight, centered and scaled age, year, birth type, and rearing type, and the random effect of consignor. Birth type, rear type, and age were not significant (P &gt; 0.10). The least square mean (SE) fecal egg counts by year were 344 (118) for 2012, 623 (214) for 2013, 574 (195) for 2014, 1,125 (409) for 2015, 745 (253) for 2016, 408 (142) for 2017, and 239 (86) for 2018. Differences in summer precipitation could affect average parasite load. Despite similar total summer precipitation, 2012 had 1 extremely wet month whereas, 2015 had consistent precipitation throughout the summer. We conclude that producers should not compare fecal egg counts across years because the overall average may be multiple-fold different from year to year. Ranking rams within year will be more effective to select for improved parasite resistance.

Genetic evaluation of crossbred lamb production. 3. Growth and carcass performance of second-cross lambs

2007 ◽  
Vol 58 (5) ◽  
pp. 457 ◽  
Author(s):  
R. A. Afolayan ◽  
N. M. Fogarty ◽  
V. M. Ingham ◽  
A. R. Gilmour ◽  
G. M. Gaunt ◽  
...  
Keyword(s):  
Fixed Effects ◽  
Mixed Model ◽  
Carcass Weight ◽  
Weaning Weight ◽  
Weight Range ◽  
Significant Difference ◽  
Ewe Lamb ◽  
Meat Ph ◽  
Meat Colour ◽  
Carcass Performance

This study evaluated the growth and carcass performance of second-cross lambs that were the progeny of common terminal sires and a range of first-cross ewes. The first-cross ewes were the progeny of 91 industry sires from several maternal breeds including the Border Leicester, East Friesian, Finnsheep, Coopworth, White Suffolk, Corriedale, and Booroola Leicester breeds. The first-cross ewes were generated at 3 sites over 3 years, and 3 common maternal sires were used at each site and each year to provide genetic links for combined analysis. The 2726 first-cross ewes were mated naturally to common terminal sires for 3 years at each site to quantify the variation in maternal genetics on the performance of 11 341 second-cross cross lambs. The birthweight, weaning weight (at an average age of 100 days) and post-weaning weight (at an average age of 200 days) of the second-cross lambs were analysed using mixed-model procedures. The lambs were slaughtered (n = 8878) at an average target carcass weight of 22 kg and dressing yield, carcass fat, muscle, meat colour, and meat pH were analysed. Crossbred ewe breed (the maternal grand sire breed) was significant for birthweight (range of 0.9 kg), weaning weight (range 4.4 kg) and post-weaning weight (range 4.6 kg). Type of birth and rearing, age of dam, and sex effects were significant for all liveweights. Ewe breed was significant for hot carcass weight, carcass fat levels, and muscle dimensions, but not for meat colour and ultimate meat pH. There was a significant difference between wether and ewe lamb carcasses for most traits, with other fixed effects generally being small when carcass weight was included as a covariate. Lamb carcasses from East Friesian-cross ewes were very lean compared with carcasses from all other ewe breeds (~2 mm lower fat depth at the GR site at 22 kg carcass weight). This comprehensive study of maternal sire breeds provides an opportunity to exploit between-breed variation for some maternal growth and carcass traits. There was, however, considerable overlap among breeds and opportunities exist for additional improvement by exploiting between-maternal sire genetic variance. The role of improved growth and carcass performance in profitability of prime lamb enterprises is discussed.

Gestational Hypertension and Their Impact on Activin A Concentration of the Human Milk

2021 ◽  
Author(s):  
Chiara Peila ◽  
Elena Spada ◽  
Alessandra Coscia ◽  
Stefano Sottemano ◽  
Giulia Fregnan ◽  
...  
Keyword(s):  
Breast Milk ◽  
Human Milk ◽  
Fixed Effects ◽  
Gestational Hypertension ◽  
Random Effect ◽  
Covariance Structure ◽  
Study Groups ◽  
Activin A ◽  
Mature Milk ◽  
Significant Difference

Abstract Introduction It is known that Preeclampsia affects the lactogenesis, but literature data on the effects of this syndrome on the neurobiomarkers composition and Activin A of Human Milk of the lactating mother are not available. The aim of this study is to investigate the effects of this gestational pathology on Activin A levels, a neurobiomarker known to play an important role in the development and protection of the central nervous system.Methods The women recruited in the study were divided in two different study groups: preeclamptic or healthy women. All the breast milk samples were collected using the same procedure into sterile devices BPA-free. Activin A was quantified using an ELISA test. To investigate the effect of pathology in the Activin a concentration in the 3 phases, mixed linear model with unistructural covariance structure, mother as random effect, and fixed effects were performed.Results Activin A was detected in all samples. There were no significant differences between Preeclamptic mother and Normotensive women. The only significant effect is related to the HM phase: in particular, it is significant the difference between colostrum and mature milk (p<0.01).Conclusion There is not any significant difference in Activin A breast milk composition from hypertensive and normotensive women. This result allows us to affirm that breast milk beneficial properties are maintained even if gestational hypertension occurs.

PSV-B-18 Characterization of the fecal microbiome of healthy adult beagle dogs supplemented with graded levels of bacillus coagulans GBI-30, 6086

2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 337-338
Author(s):  
Heather L Acuff ◽  
Tara N Gaire ◽  
Tyler Doerksen ◽  
Andrea Lu ◽  
Michael P Hays ◽  
...  
Keyword(s):  
Relative Abundance ◽  
Fixed Effects ◽  
Mixed Model ◽  
Healthy Adult ◽  
Random Effect ◽  
Bacillus Coagulans ◽  
Community Diversity ◽  
Rrna Gene ◽  
Beagle Dogs ◽  
Fecal Microbiome

Abstract This study aimed to evaluate the effect of Bacillus coagulans GBI-30, 6086 on the fecal microbiome of healthy adult dogs. Extruded diets containing graded levels of probiotic applied either to the base ration before extrusion or as a topical coating post-extrusion were randomly assigned to ten individually-housed Beagle dogs (7 castrated males, 3 spayed females) of similar age (5.75 ± 0.23 yr) and body weight (12.3 ± 1.5 kg) in a 5 x 5 replicated Latin square with 16-d adaptation and 5-d total fecal collection for each period. Five dietary treatments were formulated to deliver a dose of 0-, 6-, 7-, 8-, or 9-log10 CFU·dog-1·d-1. Fresh fecal samples (n=50) were analyzed by 16S rRNA gene pyrosequencing. Community diversity was evaluated in R (v4.0.3, R Core Team, 2019). Relative abundance data were analyzed using a mixed model (v9.4, SAS Institute, Inc., Cary, NC) with treatment and period as fixed effects and dog as a random effect. Results were considered significant at P &lt; 0.05. Predominant phyla were Firmicutes (mean 81.2% ± 5), Actinobacteria (mean 9.9% ± 4.4), Bacteroidetes (mean 4.5% ± 1.7), Proteobacteria (mean 1.3% ± 0.7), and Fusobacteria (mean 1.1% ± 0.6). No evidence of shifts in predominant phyla, class, family, or genus taxonomic levels were observed except for the Bacillus genus, which had a greater relative abundance (P = 0.0189) in the low probiotic coating and high probiotic coating treatment groups compared to the extruded probiotic group. Alpha-diversity indices (Richness, Chao1, ACE, Shannon, Simpson, Inverse Simpson, and Fisher) and beta-diversity metrics (principal coordinate analysis and multi-dimensional scaling) were similar for all treatments. This data indicates that supplementation with Bacillus coagulans GBI-30, 6086 at a dose of up to 9 log10 CFU·d-1 did not alter the overall diversity of the fecal microbiome of healthy adult dogs over a 21-d period.

scholarly journals Estimation of direct and maternal genetic parameters for weaning weight in Hungarian Simmental cattle

2021 ◽  
pp. 17-22
Author(s):  
Afees Abiola Ajasa ◽  
Imre Füller ◽  
Barnabás Vágó ◽  
István Komlósi ◽  
János Posta
Keyword(s):  
Fixed Effects ◽  
Genetic Parameters ◽  
Additive Genetic Variance ◽  
Random Effect ◽  
Ratio Test ◽  
Genetic Covariance ◽  
Weaning Weight ◽  
Simmental Cattle ◽  
Estimate Variance ◽  
Best Fit

The aim of the current research was to estimate variance components and genetic parameters of weaning weight in Hungarian Simmental cattle. Weaning weight records were obtained from the Association of Hungarian Simmental Breeders. The dataset comprised of 44,278 animals born from 1975 to 2020. The data was analyzed using the restricted maximum likelihood methodology of the Wombat software. We fitted a total of six models to the weaning weight data of Hungarian Simmental cattle. Models ranged from a simple model with animals as the only random effect to a model that had maternal environmental effects as additional random effects as well as direct maternal genetic covariance. Fixed effects in the model comprised of herd, birth year, calving order and sex. Likelihood ratio test was used to determine the best fit model for the data. Results indicated that allowing for direct-maternal genetic covariance increases the direct and maternal effect dramatically. The best fit model had direct and maternal genetic effects as the only random effect with non-zero direct-maternal genetic correlation. Direct heritability, maternal heritability and direct maternal correlation of the best fit model was 0.57, 0.16 and -0.78 respectively. The result indicates that problem of (co-)sampling variation occurs when attempting to partition additive genetic variance into direct and maternal components.

scholarly journals Goats Given Transdermal Flunixin Meglumine Displayed Less Pain Behavior After Castration

2020 ◽  
Author(s):  
Amanda Lee ◽  
Meggan Graves ◽  
Andrea Lear ◽  
Sherry Cox ◽  
Marc Caldwell ◽  
...  
Keyword(s):  
Fixed Effects ◽  
Mixed Model ◽  
Linear Mixed Model ◽  
Body Position ◽  
Random Effect ◽  
Pain Behavior ◽  
Bout Duration ◽  
Flunixin Meglumine ◽  
Meat Goats ◽  
Transdermal Application

AbstractPain management should be utilized with castration to reduce physiological and behavioral changes. Transdermal application of drugs require less animal management and fewer labor risks, which can occur with oral administration or injections. The objective was to determine the effects of transdermal flunixin meglumine on meat goats’ behavior post-castration. Male goats (N = 18; mean body weight ± standard deviation: 26.4 ± 1.6 kg) were housed individually in pens and randomly assigned to 1 of 3 treatments: (1) castrated, dosed with transdermal flunixin meglumine; (2) castrated, dosed with transdermal placebo; and (3) sham castrated, dosed with transdermal flunixin meglumine. Body position, rumination, and head- pressing were observed for 1 h ± 10 minutes twice daily on days −1, 0, 1, 2, and 5 around castration. Each goat was observed once every 5-minutes (scan samples) and reported as percentage of observations. Accelerometers were used to measure standing, lying, and laterality (total time, bouts, and bout duration). A linear mixed model was conducted using GLIMMIX. Fixed effects of treatment, day relative to castration, and treatment*day relative to castration and random effect of date and goat nested within treatment were included. Treatment 1 goats (32.7 ± 2.8%) and treatment 2 goats (32.5 ± 2.8%) ruminated less than treatment 3 goats (47.4 ± 2.8%, P = 0.0012). Head pressing was greater on day of castration in treatment 2 goats (P < 0.001). Standing bout duration was greatest in treatment 2 goats on day 1 post-castration (P < 0.001). Lying bout duration was greatest in treatment 2 goats on day 1 post-castration compared to treatment 1 and treatment 3 goats(P < 0.001). Transdermal flunixin meglumine improved goats’ fluidity of movement post-castration and decreased head pressing, indicating a mitigation of pain behavior.

scholarly journals The Impact of Misspecified Random Effect Distribution in a Weibull Regression Mixed Model

Stats ◽  
2018 ◽  
Vol 1 (1) ◽  
pp. 48-76
Author(s):  
Freddy Hernández ◽  
Viviana Giampaoli
Keyword(s):  
Weibull Distribution ◽  
Random Effects ◽  
Mixed Models ◽  
Fixed Effects ◽  
Mixed Model ◽  
Random Effect ◽  
Estimation Procedure ◽  
Weibull Regression ◽  
Two Parameters ◽  
The Impact

Mixed models are useful tools for analyzing clustered and longitudinal data. These models assume that random effects are normally distributed. However, this may be unrealistic or restrictive when representing information of the data. Several papers have been published to quantify the impacts of misspecification of the shape of the random effects in mixed models. Notably, these studies primarily concentrated their efforts on models with response variables that have normal, logistic and Poisson distributions, and the results were not conclusive. As such, we investigated the misspecification of the shape of the random effects in a Weibull regression mixed model with random intercepts in the two parameters of the Weibull distribution. Through an extensive simulation study considering six random effect distributions and assuming normality for the random effects in the estimation procedure, we found an impact of misspecification on the estimations of the fixed effects associated with the second parameter σ of the Weibull distribution. Additionally, the variance components of the model were also affected by the misspecification.

scholarly journals PSXI-32 Potential improvements in milk production of mid lactating Holstein cows through changes in the defoliation intensity on a mixed pasture

2019 ◽  
Vol 97 (Supplement_3) ◽  
pp. 384-385
Author(s):  
Oliver Fast Hinz ◽  
Pablo Chilibroste ◽  
Gabriel Menegazzi ◽  
Matías Oborsky ◽  
Pablo Soca ◽  
...  
Keyword(s):  
Milk Production ◽  
Milk Yield ◽  
Festuca Arundinacea ◽  
Fixed Effects ◽  
Mixed Model ◽  
Body Condition Score ◽  
Random Effect ◽  
Milk Composition ◽  
Control Treatment ◽  
Condition Score

Abstract An experiment was performed to study the effect of two contrasting defoliation intensities of a fescue based pasture on milk production of 24 mid lactating multiparous cows. The animals were blocked according to parity, body weight (587 ± 42 kg), body condition score (2.77 ± 0.16) and calving date, and were randomly allocated to one of these two treatments: lax treatment (TL) 12 cm and control treatment (TC) 6 cm, with four replications. It was used a second-year pasture of Festuca arundinacea and Lotus corniculatus (2530 ± 180 kgDM/ha), divided into eight plots of 0.3 ha. Each plot was grazed by three cows during as many days as necessary until the defoliation height of each treatment was achieved. This would be determined by daily measures of the pasture height. Animals had one grazing session from 8:00 to 16:00 h. Both treatments received 7.5 kgDM of supplementation (17% Crude Protein; 2.81 Mcal/kgDM) in individual troughs. The cows were milked twice a day (05:00 and 17:00 h). Milk production was registered daily while milk composition was measured at the beginning and at the end of the experiment (samples from two consecutive milking). For milk yield results, a mixed model was used (Glimmix procedure, SAS 9.2, 2010) to analyse with treatment, day and their interaction as fixed effects and block as a random effect. While milk composition was analysed with only treatment as fixed effect. Milk yield was greater for TL than TC, while there was no difference in milk composition between treatments (Table 1). There is a significant effect of the day and an interaction between treatment and day (Figure 1), as difference was greater for TL to the end of the grazing period. This leads to the conclusion that it is possible to improve the milk production through less defoliation intensity.

scholarly journals PSIV-16 Effect of a 1-monoglyceride, 1,2-diglyceride of butyric-, caproic- and caprilic acid, and Avilamycin on performance and intestinal E. coli when fed to piglets challenged with E. coli

2019 ◽  
Vol 97 (Supplement_2) ◽  
pp. 188-189
Author(s):  
Michael Coelho ◽  
Peter Ader
Keyword(s):  
Caprylic Acid ◽  
Block Design ◽  
Random Effect ◽  
Fixed Effect ◽  
Experimental Unit ◽  
Infection Model ◽  
E Coli ◽  
Significant Difference ◽  
Randomized Complete Block Design ◽  
T1 And T2

Abstract This study examined the effect of 1-monoglycerides and 1,2-diglycerides of butyric-, caproic- and caprylic acid (SILOHealth™ 104L [monoglycerides]) and avilamycin on day 14 and 21 post weaning performance of E. coli (GN-Ent and O157:H7) day 5 challenged piglets fed corn/soy diets that met or exceeded current NRC (2012) recommendations. A total of 96, Choice Genetics CG32, piglets were used in a randomized complete block design with pen as the experimental unit, treatment as the fixed effect, and block as the random effect (4 piglets/pen x 3 treatments x 8 replications). Pigs were blocked by sex and weight and were orally dosed with 5 ml (1x109 CFU/g, strain GN-Ent and O157:H7) E. coli d 5 after weaning (Ec). The treatment were: NC with Ec; T1=NC + 3 kg/MT monoglycerides; T2=NC+ 80 ppm avilamycin. Least significant difference was used to compare means of treatment. Mortalities and pen removals were weighed and recorded. The E. coli infection model was effective in causing E. coli mortality of 25% at d14 post weaning and 33% at d21 post weaning in NC. T1 and T2 reduced mortality versus NC at d14 (25, 3 and 0%, P < 0.05) and d21 (33, 4 and 0%, P < 0.05), increased ADG at d14 (203, 255 and 259 g, P < 0.05) and d21 (456, 511 and 515 g, P < 0.05), decreased FCR at d21 (1.90, 1.85 and 1.83, P < 0.05), and decreased intestinal E. coli, log 10 of CFU/g, versus NC (4.1, 2.2 and 2.1, P < 0.05). Monoglycerides and avilamycin performance, mortality and intestinal E. coli log 10 were not significantly different at P < 0.05. In conclusion, the use of monoglycerides improved ADG, reduced FCR, reduced mortality and reduced intestinal E. coli log 10 at day 14 and 21 post weaning versus NC and monoglycerides were not significant different (P < 0.05) than avilamycin.

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