Sampling in the Analytical Scheme

1989 ◽  
Vol 72 (3) ◽  
pp. 405-411 ◽  
Author(s):  
Frederick M Garfield

Abstract The general principles of sampling in the analytical scheme, sampling definitions, and sampling planning are considered. Statistical considerations are stressed with attention to sampling by attributes and variables and the use of sampling control charts. Sampling techniques, records and chain-of-custody procedures, sample handling, laboratory sampling, and sample preparation for analysis, as well as reasons and causes of sampling errors, are discussed.

Fuel ◽  
2021 ◽  
Vol 305 ◽  
pp. 121399
Author(s):  
Brent A. Modereger ◽  
Sarah E. Nowling ◽  
Wan Tang Jeff Zhang ◽  
Mackenzie L. Jones ◽  
Nathan Chapman ◽  
...  

2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Pan Fang ◽  
Yanlong Ji ◽  
Ivan Silbern ◽  
Carmen Doebele ◽  
Momchil Ninov ◽  
...  

Abstract Regulation of protein N-glycosylation is essential in human cells. However, large-scale, accurate, and site-specific quantification of glycosylation is still technically challenging. We here introduce SugarQuant, an integrated mass spectrometry-based pipeline comprising protein aggregation capture (PAC)-based sample preparation, multi-notch MS3 acquisition (Glyco-SPS-MS3) and a data-processing tool (GlycoBinder) that enables confident identification and quantification of intact glycopeptides in complex biological samples. PAC significantly reduces sample-handling time without compromising sensitivity. Glyco-SPS-MS3 combines high-resolution MS2 and MS3 scans, resulting in enhanced reporter signals of isobaric mass tags, improved detection of N-glycopeptide fragments, and lowered interference in multiplexed quantification. GlycoBinder enables streamlined processing of Glyco-SPS-MS3 data, followed by a two-step database search, which increases the identification rates of glycopeptides by 22% compared with conventional strategies. We apply SugarQuant to identify and quantify more than 5,000 unique glycoforms in Burkitt’s lymphoma cells, and determine site-specific glycosylation changes that occurred upon inhibition of fucosylation at high confidence.


2011 ◽  
Vol 29 (13) ◽  
pp. 1744-1749 ◽  
Author(s):  
Michael Marberger ◽  
John D. McConnell ◽  
Ivy Fowler ◽  
Gerald L. Andriole ◽  
David G. Bostwick ◽  
...  

Purpose The Reduction by Dutasteride of Prostate Cancer Events (REDUCE) prostate cancer risk reduction study randomly assigned 8,231 men to dutasteride or placebo for 4 years. Protocol-mandated biopsies were obtained after 2 and 4 years. After the discovery of three cases of biopsy sample misidentification in the first 2 years, all protocol-mandated biopsy samples were DNA tested to verify biopsy identity. Methods Biopsy and blood DNA profiling was performed retrospectively for the year 2 scheduled biopsies and prospectively for the year 4 scheduled biopsies. Toward the end of year 2, multiple changes were made to improve sample handling and chain of custody. Results Of the 6,458 year 2 and 4,777 year 4 biopsies, 26 biopsies reflecting 13 sample handling errors at year 2 (0.4%) and one biopsy reflecting one sample handling error at year 4 (0.02%) were confirmed to be mismatched to the patient for whom they were originally submitted. Of 6,733 reference blood samples profiled, 31 (0.5%) were found to be mismatched to the patient's verified identity profile. Sample identification errors occurred at local research sites and central laboratories. Conclusion Biopsy misidentification is a potential problem in clinical laboratories and clinical trials. Until now, biopsy misidentification has not been studied in the setting of a large, multinational clinical trial. In the REDUCE study, process improvement initiatives halfway through the trial dramatically reduced biopsy mismatches. The potential for biopsy mismatches in clinical trials and clinical practice is an under-recognized problem that requires rigorous attention to details of chain of custody and consideration of more widespread DNA identity testing.


1955 ◽  
Vol 33 (4) ◽  
pp. 225-294 ◽  
Author(s):  
R. F. Morris

The problems that arise in the development of sampling techniques are treated in sequence, the solutions illustrated being based on population studies on the spruce budworm in northwestern New Brunswick. Insect populations may be expressed in different ways, depending upon the objects of the sampling, and it is essential that these objects be carefully defined. In the spruce budworm studies the preparation of life tables is the primary objective, and population is expressed in terms of a basic unit (branch surface) and an absolute unit (the acre). The correct timing of sampling requires a knowledge of the insect's life history, and of the stability of the population in place and time. When insect signs (pupal cases, empty egg masses) are sampled, the retention factor gives rise to certain non-sampling errors. The mechanics of collecting foliage from tall trees is solved with the aid of aluminum pole pruners, extension ladders, tree trestles, and platforms. The mechanics of counting the insects by ocular examination of the foliage samples also gives rise to non-sampling errors, which can be minimized by adequate supervision and by check examination.The universe for which each life table is prepared is a homogeneous forest stand. It is shown that a collection unit smaller than a whole branch, or its longitudinal one-half, is unlikely to be suitable for the measurement of absolute population. Intertree variance is the major source of population variance for the budworm, and for most other insects that have been studied intensively. Significant variance is also associated with crown levels, and the pattern of vertical distribution of the budworm is not predictable. The criterion of representativeness can be satisfied, however, by drawing samples from four crown levels in such a way that the intensity of sampling is equal in each level. The design found suitable for the budworm consists of proportionate sampling within the crown, stratified sampling by crown stories within the stand (with sub-strata, when necessary, according to host species or flowering condition), and cluster sampling within strata. Samples may be drawn from the same trees during successive budworm generations, and show correlations which appear to arise from the preferences of ovipositing adults. The effect of the correlations on sampling design and analysis is discussed.The relation between mean and variance indicates that population data are represented satisfactorily by the negative binomial distribution; variance may be stabilized and additivity provided through the use of logarithmic transformation. Methods of calculating optimum sample size are illustrated for both the original and the transformed data. The cost function for the sampling design used in the budworm work is presented, and its use in the comparison of designs and the detection of limiting factors is demonstrated. The estimation of population per acre is achieved by means of regressions showing the relationships between foliage quantity, crown volume, and diameter of the trunk. Useful incidental data, including a measure of population intensity, and biological data for life tables, may be obtained during sampling. Also, the design can readily be modified to suit purposes of extensive insect survey or the biological assay of a single stimulus.It is concluded that neither sampling nor non-sampling errors are likely to be prohibitive in forest insect population work. The relative magnitude of sampling errors varies inversely with the population mean, however, and the preparation of complete life tables may not be practical at endemic population levels. In any one generation of the insect it is generally necessary to accept error limits that seem large in relation to those of laboratory experimentation. But using the same sampling plots over a period of years, replication is achieved in time as well as in place, so the formation of erroneous conclusions on epidemiological phenomena seems improbable.


Author(s):  
R.J. Young ◽  
P.D. Carleson ◽  
X. Da ◽  
T. Hunt ◽  
J.F. Walker

Abstract Recent advances in the methods of preparing transmission electron microscope (TEM) samples using the focused ion beam (FIB) are presented. In particular, automation of TEM sample preparation is described. These automation methods, coupled with advances in ion column design, make it possible to prepare samples more efficiently and with less user involvement, thereby increasing FIB system utilization. Issues relating to sample handling and process-induced artifacts are also discussed.


1993 ◽  
Vol 33 (8) ◽  
pp. 983 ◽  
Author(s):  
AJ Brown

A review of soil sampling for chemical analysis is presented for farm paddocks, orchard blocks and experimental plots with relevance to Australian and New Zealand conditions. Basic principles concerning field variability and its determination, sampling equipment, sample handling and sampling techniques are given. Detailed examination of both published and unpublished data on spatial and temporal variation in cultivated and uncultivated soils is also provided. Deficiencies and conflicts in the database are highlighted and provide a basis for future work.


1999 ◽  
Vol 5 (S2) ◽  
pp. 678-679
Author(s):  
L.D. Marks

Electron Microscopy of surfaces has always been a topic for a few stubborn souls. In addition to the standard headaches of electron microscopes (maintenance, breakdown) one has to handle the additional complications of maintaining a clean enough vacuum to make the results mean anything. (Without vacuum control the structures observed may be due to the contaminants, and hence meaningless.) To complicate things further, in addition to conventional ex-situ sample preparation one has to clean and equilibriate the surface while still retaining thin enough regions for useful study. The final step is to work out which techniques provide surface information and learn how to exploit them. It is appropriate to look at some of the key elements that are needed.Sample Handling: The key to success with surfaces is not really the microscopy, but instead the sample treatment. The first crucial element is control over the sputter cleaning process.(While simple heating would be less damaging, if one wants to look at something other than silicon sputter cleaning is a must.)


1987 ◽  
Vol 41 (2) ◽  
pp. 280-287 ◽  
Author(s):  
M. J. D. Low ◽  
C. Morterra

FT-IR photothermal beam deflection spectroscopy (PBDS) is truly nondestructive in that none of the sample preparation methods needed for the IR examination of solids are mandated. Such nondestructive examination is, however, inefficient—in that long scanning times are frequently needed—and is not really required with many samples. If it is permissible to subject the sample to a simple hand grinding, efficiency can be greatly improved. Sample preparation and handling are discussed, and the peculiarities of certain samples are described. Particular emphasis is placed on the necessity of proper sample handling for surface studies, data of the vacuum pyrolysis of polyvinyledene being used as example.


Radiocarbon ◽  
2004 ◽  
Vol 46 (1) ◽  
pp. 65-75 ◽  
Author(s):  
Thomas Uhl ◽  
Wolfgang Kretschmer ◽  
Wolfgang Luppold ◽  
Andreas Scharf

The requests to measure many samples, and samples with very low carbon masses, make it necessary to develop new techniques in sample handling to accelerate sample preparation and to eliminate carbon contamination. Our 40 MC-SNICS was recently modified to a hybrid ion source. To run the hybrid ion source with a gas parameter, settings were studied and a gas handling system for the direct coupling of an elemental analyzer and a gas ion source was developed.


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