sample treatment
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Author(s):  
Cristian Giertyas ◽  
Victor Silva ◽  
Maria de Oliveira ◽  
Emerson Freire ◽  
Josué Santos ◽  
...  

Two different gold-silica-based nanomaterials were prepared: (i) silica-supported gold nanoparticles (AuNP/SiO2); and (ii) gold-silica core-shell nanoparticles (AuNP@SiO2). Three strategies for sample treatment (S), consisting in acid treatments, were employed: (S1) HNO3; (S2) HNO3 + HCl; and (S3) HF + HNO3 + HCl, applying microwave oven digestion for S2 and S3. From three calibration curves, slope, intercept, and linear correlation coefficient were obtained. The accuracy of the methods was evaluated by comparing the gold contents in a sample determined by flame atomic absorption spectrometry (FAAS) and by inductively coupled plasma atomic emission spectrometry (ICP-OES). Finally, the amount of gold for all samples was determined by FAAS. UV-Vis spectroscopy and transmission electron microscopy (TEM) were used to compare the material before and after sample treatment. By comparison, the application of S2 and S3 allowed the presence of gold on or in the silica matrix to be determined and the amount quantified.


2021 ◽  
Author(s):  
Orchid M Allicock ◽  
Devyn Yolda-Carr ◽  
Rebecca Earnest ◽  
Mallery Breban ◽  
Noel Vega ◽  
...  

Early in the pandemic, a simple, open-source, RNA extraction-free RT-qPCR protocol for SARS-CoV-2 detection in saliva was developed and made widely available. This simplified approach (SalivaDirect) requires only sample treatment with proteinase K prior to PCR testing. However, feedback from clinical laboratories highlighted a need for a flexible workflow that can be seamlessly integrated into their current health and safety requirements for the receiving and handling of potentially infectious samples. To address these varying needs, we explored additional pre-PCR workflows. We built upon the original SalivaDirect workflow to include an initial incubation step (95°C for 30 minutes, 95°C for 5 minutes or 65°C for 15 minutes) with or without addition of proteinase K. The limit of detection for the workflows tested did not significantly differ from that of the original SalivaDirect workflow. When tested on de-identified saliva samples from confirmed COVID-19 individuals, these workflows also produced comparable virus detection and assay sensitivities, as determined by RT-qPCR analysis. Exclusion of proteinase K did not negatively affect the sensitivity of the assay. The addition of multiple heat pretreatment options to the SalivaDirect protocol increases the accessibility of this cost-effective SARS-CoV-2 test as it gives diagnostic laboratories the flexibility to implement the workflow which best suits their safety protocols.


Author(s):  
Elin Marlina ◽  
Purwanto Purwanto ◽  
Sudarno Sudarno

In this study, decolorization of wastewater samples taken from the paper industry is investigated using electrochemical peroxidation process. The electrochemical peroxidation process is a part of electrochemical advanced oxidation processes, which is based on the Fenton’s chemical reaction, provided by addition of external H2O2 into reaction cell. In this study, iron is used as anode and graphite as cathode put at the fixed distance of 30 mm in a glass reaction cell. The cell was filled with the solution containing wastewater and sodium chloride as the supporting electrolyte. Factors of the process such as pH, current intensity, hydrogen peroxide concentration, and time of treatment were studied. The results illustrate that all these parameters affect efficiencies of dye removal and chemical oxygen demand (COD) reducing. The maximal removal of wastewater contaminants was achieved under acid (pH 3) condition, with the applied current of 1 A, and hydrogen peroxide concentration of 0.033 M. At these conditions, decolorization process efficiency reached 100 and 83 % of COD removal after 40 minutes of wastewater sample treatment. In addition, the electrical energy consumption for wastewater treatment by electrochemical peroxidation is calculated, showing increase as the current intensity of treatment process was increased. The obtained results suggest that electrochemical peroxidation process can be used for removing dye compounds and chemical oxygen demand (COD) from industrial wastewaters with high removal efficiency.


Biomedicines ◽  
2021 ◽  
Vol 9 (12) ◽  
pp. 1868
Author(s):  
Michal Szczepanczyk ◽  
Tautgirdas Ruzgas ◽  
Fredrika Gullfot ◽  
Anna Gustafsson ◽  
Sebastian Björklund

The generation of reactive oxygen species presents a destructive challenge for the skin organ and there is a clear need to advance skin care formulations aiming at alleviating oxidative stress. The aim of this work was to characterize the activity of the antioxidative enzyme catalase in keratinocytes and in the skin barrier (i.e., the stratum corneum). Further, the goal was to compare the activity levels with the corresponding catalase activity found in defatted algae biomass, which may serve as a source of antioxidative enzymes, as well as other beneficial algae-derived molecules, to be employed in skin care products. For this, an oxygen electrode-based method was employed to determine the catalase activity and the apparent kinetic parameters for purified catalase, as well as catalase naturally present in HaCaT keratinocytes, excised stratum corneum samples collected from pig ears with various amounts of melanin, and defatted algae biomass from the diatom Phaeodactylum tricornutum. Taken together, this work illustrates the versatility of the oxygen electrode-based method for characterizing catalase function in samples with a high degree of complexity and enables the assessment of sample treatment protocols and comparisons between different biological systems related to the skin organ or algae-derived materials as a potential source of skin care ingredients for combating oxidative stress.


Water ◽  
2021 ◽  
Vol 13 (23) ◽  
pp. 3428
Author(s):  
Chanbasha Basheer ◽  
Amjad A. Shaikh ◽  
Eid M. Al-Mutairi ◽  
Mokhtar Noor El Deen ◽  
Khurram Karim Qureshi

In this study, ultrasonication-assisted calcium carbonate scale inhibition was investigated compared with a commercial antiscalant ATMP (amino tris(methyl phosphonic acid)). The effects of varying ultrasound amplitude, pH, and inhibition duration were evaluated. The inhibition of calcium carbonate scale formation was measured based on the concentration of calcium in the solution after subjecting to different conditions. Scale deposits were also characterized using scanning electron microscopy and X-ray diffraction spectroscopy. Inhibition of scale formation was supported at a pH of 7 for an ultrasound amplitude of 150 W. A 94% calcium carbonate inhibition was recorded when the experiment was carried out with ultrasonication. The use of 5 mg/L ATMP achieved a 90% calcium carbonate inhibition of ATMP. The result of the characterization revealed that the morphology of the crystals was unaffected by ultrasonic irradiation. Sample treatment was performed with two different membranes to evaluate the calcium carbonate deposition, and data reveals that, at identical conditions, ultrasonication provides less deposition when compared to the control experiments.


2021 ◽  
Vol 12 ◽  
Author(s):  
Martina Cechova ◽  
Monika Beinhauerova ◽  
Vladimir Babak ◽  
Iva Slana ◽  
Petr Kralik

Mycobacterium avium subsp. paratuberculosis (MAP) represents a slow-growing bacterium causing paratuberculosis, especially in domestic and wild ruminants. Until recently, the assessment of MAP viability relied mainly on cultivation, which is very time consuming and is unable to detect viable but non-culturable cells. Subsequently, viability PCR, a method combining sample treatment with the DNA-modifying agent ethidium monoazide (EMA) or propidium monoazide (PMA) and quantitative PCR (qPCR), was developed, enabling the selective detection of MAP cells with an intact cell membrane. However, this technology requires a laborious procedure involving the need to work in the dark and on ice. In our study, a method based on a combination of platinum compound treatment and qPCR, which does not require such a demanding procedure, was investigated to determine mycobacterial cell viability. The conditions of platinum compound treatment were optimized for the fast-growing mycobacterium M. smegmatis using live and heat-killed cells. The optimal conditions consisting of a single treatment with 100 μM cis-dichlorodiammine platinum(II) for 60 min at 5°C resulted in a difference in quantification cycle (Cq) values between live and dead membrane-compromised mycobacterial cells of about 6 Cq corresponding to about 2 log10 units. This optimized viability assay was eventually applied to MAP cells and demonstrated a better ability to distinguish between live and heat-killed mycobacteria as compared to PMA. The viability assay combining the Pt treatment with qPCR thereby proved to be a promising method for the enumeration of viable MAP cells in foodstuffs, environmental, and clinical samples which could replace the time-consuming cultivation or laborious procedures required when using PMA.


2021 ◽  
Author(s):  
Ziyi Yao ◽  
Zi-yi Yao ◽  
Xue-xia Jia ◽  
Shu-yue Ren ◽  
Shi-ping Yang ◽  
...  

Abstract Background As a common small molecule substance, environmental hormones widely exist in nature, especially water sources, which have a profound effects in humans. Highly efficient and sensitive method for estrogens in the environment are essential. Results In this paper, a novel high-throughput platform was established based on five small hormones molecules specificity aptamer and magnetic beads (MBs). The results showed that the sensitivity of the proposed method are greatly improved. The limit of detection(LOD) of this method for atrazine(Atz), profenofos, bisphenolA(BPA), estradiol(E2), and polychlorinated biphenyls(PCBs) were 9.46, 20.75, 23.81, 8.97, 6.27 pg/mL, respectively. The Recovery rate of the diluted environmental hormones spiked in the samples of Haihe river were in the range of 87.5-111.02% with relative standard deviations (RSDs) lower than 28.44%. Conclusion This platform based on new complementary strand fragments can simultaneously rapid detection five environmental hormones. The whole procedure completed within 1.5h including sample treatment, incubation and detection, greatly improving the detection efficiency.


Author(s):  
Mauricio Llaver ◽  
Emiliano F. Fiorentini ◽  
María N. Oviedo ◽  
Pamela Y. Quintas ◽  
Rodolfo G. Wuilloud

Speciation analysis is a key aspect of modern analytical chemistry, as the toxicity, environmental mobility, and bioavailability of elemental analytes are known to depend strongly on an element’s chemical species. Henceforth, great efforts have been made in recent years to develop methods that allow not only the determination of elements as a whole, but also each of its separate species. Environmental analytical chemistry has not ignored this trend, and this review aims to summarize the latest methods and techniques developed with this purpose. From the perspective of each relevant element and highlighting the importance of their speciation analysis, different sample treatment methods are introduced and described, with the spotlight on the use of modern nanomaterials and novel solvents in solid phase and liquid-liquid microextractions. In addition, an in-depth discussion of instrumental techniques aimed both at the separation and quantification of metal and metalloid species is presented, ranging from chromatographic separations to electro-chemical speciation analysis. Special emphasis is made throughout this work on the greenness of these developments, considering their alignment with the precepts of the Green Chemistry concept and critically reviewing their environmental impact.


Author(s):  
Anupam Das ◽  
Vikramjeet Singh ◽  
Nikhil Gupta ◽  
Ashish Chandra Agarwal ◽  
Tushar Gautam ◽  
...  

COVID-19 manifestations have been evolving and affect different parts of the body every time a new wave comes. Association of mucormycosis in COVID-19, Covid Associated Mucormycosis (CAM) affected patients especially affecting paranasal sinuses must be given serious and timely consideration. Prolonged history of uncontrolled diabetes and over the counter use of steroids and abrupt stoppage of steroids are two main factors aggravating the illness, and both these factors must be critically checked. Clinical condition like Mucormycosis are caused by pathogenic moulds of family Mucorales and Aspergillosis is caused by Aspergillus species and both can cause an invasive disease with high case fatality rate, especially in immunosuppressed patients. In the present study we are discussing a case of co-infection in Post COVID-19 patient affected with mucormycosis and aspergillosis. A 55-year-old male patient with Type 2 diabetes mellitus presented post covid with ptosis and diplopia. Mixed infections of Rhizopus arrhizus and Aspergillus flavus were diagnosed by means of fungal microscopy and culture from biopsy sample. Treatment with Amphotericin B was started, the patient responded clinically within 15 days.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Lea Lemoine ◽  
Cecile Le Brun ◽  
Francois Maillot ◽  
Camille Thorey ◽  
Annaelle Boucaud ◽  
...  

Abstract Background Ureaplasma parvum is usually part of the normal genital flora. Rarely can it cause invasive infections such as genitourinary infections, septic arthritis, or meningitis. Case presentation Here we present the first description of chronic ureterocystitis in a 56-year-old immunocompromised patient, complicated first by reactive arthritis and secondarily by contralateral septic arthritis due to U. parvum infection. U. parvum was detected in synovial fluid and in a urine sample. Treatment consisted of double-J stenting and targeted antibiotic therapy. Evolution showed resolution of urinary symptoms and clinical improvement of arthritis despite functional sequelae. Conclusions Given the high prevalence of U. parvum colonisation, this diagnosis should remain a diagnosis of exclusion. However, because of the difficulty in detecting this microorganism, it should be considered in unexplained subacute urethritis or arthritis, including reactive arthritis, especially in immunosuppressed patients. Real-time PCR positivity in the absence of a differential diagnosis should not be overlooked.


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