scholarly journals Evolutionary heritage influences Amazon tree ecology

2016 ◽  
Vol 283 (1844) ◽  
pp. 20161587 ◽  
Author(s):  
Fernanda Coelho de Souza ◽  
Kyle G. Dexter ◽  
Oliver L. Phillips ◽  
Roel J. W. Brienen ◽  
Jerome Chave ◽  
...  
Keyword(s):  
Life History ◽  
Evolutionary History ◽  
Large Scale ◽  
Phylogenetic Signal ◽  
Life History Strategies ◽  
Relative Importance ◽  
Life History Variation ◽  
Trait Variation ◽  
Closed Canopy ◽  
Repeated Evolution

Lineages tend to retain ecological characteristics of their ancestors through time. However, for some traits, selection during evolutionary history may have also played a role in determining trait values. To address the relative importance of these processes requires large-scale quantification of traits and evolutionary relationships among species. The Amazonian tree flora comprises a high diversity of angiosperm lineages and species with widely differing life-history characteristics, providing an excellent system to investigate the combined influences of evolutionary heritage and selection in determining trait variation. We used trait data related to the major axes of life-history variation among tropical trees (e.g. growth and mortality rates) from 577 inventory plots in closed-canopy forest, mapped onto a phylogenetic hypothesis spanning more than 300 genera including all major angiosperm clades to test for evolutionary constraints on traits. We found significant phylogenetic signal (PS) for all traits, consistent with evolutionarily related genera having more similar characteristics than expected by chance. Although there is also evidence for repeated evolution of pioneer and shade tolerant life-history strategies within independent lineages, the existence of significant PS allows clearer predictions of the links between evolutionary diversity, ecosystem function and the response of tropical forests to global change.

Demography of Xenosaurus platyceps (Squamata: Xenosauridae): a comparison between tropical and temperate populations

2008 ◽  
Vol 29 (2) ◽  
pp. 245-256 ◽  
Author(s):  
Carissa Jones ◽  
Isaac Rojas-González ◽  
Julio Lemos-Espinal ◽  
Jaime Zúñiga-Vega
Keyword(s):  
Life History ◽  
Population Growth ◽  
Adult Mortality ◽  
Life History Strategies ◽  
Relative Importance ◽  
Theoretical Frameworks ◽  
Population Growth Rates ◽  
Relative Contribution ◽  
Two Populations ◽  
Average Fitness

Abstract There appears to be variation in life-history strategies even between populations of the same species. For ectothermic organisms such as lizards, it has been predicted that demographic and life-history traits should differ consistently between temperate and tropical populations. This study compares the demographic strategies of a temperate and a tropical population of the lizard Xenosaurus platyceps. Population growth rates in both types of environments indicated populations in numerical equilibrium. Of the two populations, we found that the temperate population experiences lower adult mortality. The relative importance (estimated as the relative contribution to population growth rate) of permanence and of the adult/reproductive size classes is higher in the temperate population. In contrast, the relative importance for average fitness of fecundity and growth is higher in the tropical population. These results are consistent with the theoretical frameworks about life-historical differences among tropical and temperate lizard populations.

scholarly journals Loci, genes, and gene networks associated with life history variation in a model ecological organism,Daphnia pulex(complex)

2018 ◽  
Author(s):  
Jacob W. Malcom ◽  
Thomas E. Juenger ◽  
Mathew A. Leibold
Keyword(s):  
Gene Expression ◽  
Genetic Variation ◽  
Life History ◽  
Molecular Basis ◽  
Life History Traits ◽  
Evolutionary Dynamics ◽  
Daphnia Pulex ◽  
Life History Trait ◽  
Life History Variation ◽  
Trait Variation

ABSTRACTBackgroundIdentifying the molecular basis of heritable variation provides insight into the underlying mechanisms generating phenotypic variation and the evolutionary history of organismal traits. Life history trait variation is of central importance to ecological and evolutionary dynamics, and contemporary genomic tools permit studies of the basis of this variation in non-genetic model organisms. We used high density genotyping, RNA-Seq gene expression assays, and detailed phenotyping of fourteen ecologically important life history traits in a wild-caught panel of 32Daphnia pulexclones to explore the molecular basis of trait variation in a model ecological species.ResultsWe found extensive phenotypic and a range of heritable genetic variation (~0 < H2< 0.44) in the panel, and accordingly identify 75-261 genes—organized in 3-6 coexpression modules—associated with genetic variation in each trait. The trait-related coexpression modules possess well-supported promoter motifs, and in conjunction with marker variation at trans- loci, suggest a relatively small number of important expression regulators. We further identify a candidate genetic network with SNPs in eight known transcriptional regulators, and dozens of differentially expressed genes, associated with life history variation. The gene-trait associations include numerous un-annotated genes, but also support several a priori hypotheses, including an ecdysone-induced protein and several Gene Ontology pathways.ConclusionThe genetic and gene expression architecture ofDaphnialife history traits is complex, and our results provide numerous candidate loci, genes, and coexpression modules to be tested as the molecular mechanisms that underlieDaphniaeco-evolutionary dynamics.

Life History Strategies

2018 ◽  
pp. 95-126
Author(s):  
Marco Del Giudice
Keyword(s):  
Life History ◽  
Individual Differences ◽  
Life History Theory ◽  
Human Life ◽  
Life History Strategy ◽  
Current Theory ◽  
Life History Strategies ◽  
Extended Model ◽  
Life History Variation ◽  
Basic Model

The chapter introduces the basics of life history theory, the concept of life history strategy, and the fast–slow continuum of variation. After reviewing applications to animal behavior and physiology, the chapter reviews current theory and evidence on individual differences in humans as manifestations of alternative life history strategies. The chapter first presents a “basic model” of human life history–related traits, then advances an “extended model” that identifies multiple cognitive-behavioral profiles within fast and slow strategies. Specifically, it is proposed that slow strategies comprise prosocial/caregiving and skilled/provisioning profiles, whereas fast strategies comprise antisocial/exploitative and seductive/creative profiles. The chapter also reviews potential neurobiological markers of life history variation and considers key methodological issues in this area.

scholarly journals Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout

2014 ◽  
Vol 281 (1783) ◽  
pp. 20140012 ◽  
Author(s):  
Devon E. Pearse ◽  
Michael R. Miller ◽  
Alicia Abadía-Cardoso ◽  
John Carlos Garza
Keyword(s):  
Life History ◽  
Rainbow Trout ◽  
Parallel Evolution ◽  
Genomic Region ◽  
Life History Strategies ◽  
Strong Linkage Disequilibrium ◽  
Rapid Adaptation ◽  
Life History Variation ◽  
Standing Variation ◽  
Genomic Regions

Rapid adaptation to novel environments may drive changes in genomic regions through natural selection. Such changes may be population-specific or, alternatively, may involve parallel evolution of the same genomic region in multiple populations, if that region contains genes or co-adapted gene complexes affecting the selected trait(s). Both quantitative and population genetic approaches have identified associations between specific genomic regions and the anadromous (steelhead) and resident (rainbow trout) life-history strategies of Oncorhynchus mykiss . Here, we use genotype data from 95 single nucleotide polymorphisms and show that the distribution of variation in a large region of one chromosome, Omy5, is strongly associated with life-history differentiation in multiple above-barrier populations of rainbow trout and their anadromous steelhead ancestors. The associated loci are in strong linkage disequilibrium, suggesting the presence of a chromosomal inversion or other rearrangement limiting recombination. These results provide the first evidence of a common genomic basis for life-history variation in O. mykiss in a geographically diverse set of populations and extend our knowledge of the heritable basis of rapid adaptation of complex traits in novel habitats.

scholarly journals Causes and consequences of life-history variation in North American stocks of Pacific cod

2008 ◽  
Vol 66 (2) ◽  
pp. 349-357 ◽  
Author(s):  
Olav A. Ormseth ◽  
Brenda L. Norcross
Keyword(s):  
Life History ◽  
North American ◽  
Egg Production ◽  
Atlantic Cod ◽  
North Pacific Ocean ◽  
Life History Strategies ◽  
Lifetime Reproductive Success ◽  
Life History Variation ◽  
Pacific Cod ◽  
Trade Offs

Abstract Ormseth, O. A., and Norcross, B. L. 2009. Causes and consequences of life-history variation in North American stocks of Pacific cod. – ICES Journal of Marine Science, 66: 349–357. Life-history strategies of four Pacific cod (Gadus macrocephalus) stocks in the eastern North Pacific Ocean are outlined. Southern stocks grew and matured quicker, but reached smaller maximum size and had shorter lifespans than northern stocks. The trade-offs resulted in similar lifetime reproductive success among all stocks. Growth was highly dependent on latitude, but not on temperature, possibly because of differences in the duration of the growing season. Comparisons with Atlantic cod (Gadus morhua) revealed similar latitude/growth relationships among Atlantic cod stocks grouped by geographic region. In Pacific cod, greater size and longevity in the north appeared to be adaptations to overcome environmental constraints on growth and to maintain fitness. An egg production-per-recruit model suggested that the life-history strategy of northern Pacific cod stocks made them less resilient to fishing activity and age truncation than southern stocks.

scholarly journals Life history variation is maintained by fitness trade-offs and negative frequency-dependent selection

2018 ◽  
Vol 115 (17) ◽  
pp. 4441-4446 ◽  
Author(s):  
Mark R. Christie ◽  
Gordon G. McNickle ◽  
Rod A. French ◽  
Michael S. Blouin
Keyword(s):  
Life History ◽  
Reproductive Success ◽  
Life History Strategies ◽  
Lifetime Reproductive Success ◽  
Life History Variation ◽  
Additional Energy ◽  
Frequency Dependent ◽  
Frequency Dependent Selection ◽  
Trade Offs ◽  
Negative Frequency Dependent Selection

The maintenance of diverse life history strategies within and among species remains a fundamental question in ecology and evolutionary biology. By using a near-complete 16-year pedigree of 12,579 winter-run steelhead (Oncorhynchus mykiss) from the Hood River, Oregon, we examined the continued maintenance of two life history traits: the number of lifetime spawning events (semelparous vs. iteroparous) and age at first spawning (2–5 years). We found that repeat-spawning fish had more than 2.5 times the lifetime reproductive success of single-spawning fish. However, first-time repeat-spawning fish had significantly lower reproductive success than single-spawning fish of the same age, suggesting that repeat-spawning fish forego early reproduction to devote additional energy to continued survival. For single-spawning fish, we also found evidence for a fitness trade-off for age at spawning: older, larger males had higher reproductive success than younger, smaller males. For females, in contrast, we found that 3-year-old fish had the highest mean lifetime reproductive success despite the observation that 4- and 5-year-old fish were both longer and heavier. This phenomenon was explained by negative frequency-dependent selection: as 4- and 5-year-old fish decreased in frequency on the spawning grounds, their lifetime reproductive success became greater than that of the 3-year-old fish. Using a combination of mathematical and individual-based models parameterized with our empirical estimates, we demonstrate that both fitness trade-offs and negative frequency-dependent selection observed in the empirical data can theoretically maintain the diverse life history strategies found in this population.

Comparative osteohistology of some embryonic and perinatal archosaurs: developmental and behavioral implications for dinosaurs

Paleobiology ◽  
2001 ◽  
Vol 27 (1) ◽  
pp. 39-58 ◽  
Author(s):  
John R. Horner ◽  
Kevin Padian ◽  
Armand de Ricqlès
Keyword(s):  
Life History ◽  
Bone Growth ◽  
Phylogenetic Signal ◽  
Life History Strategies ◽  
Growth Strategies ◽  
Crown Group ◽  
Independent Evidence ◽  
Osteocyte Lacunae ◽  
Tissue Organization ◽  
Nesting Sites

Histologic studies of embryonic and perinatal longbones of living birds, non-avian dinosaurs, and other reptiles show a strong phylogenetic signal in the distribution of tissues and patterns of vascularization in both the shafts and the bone ends. The embryonic bones of basal archosaurs and other reptiles have thin-walled cortices and large marrow cavities that are sometimes subdivided by erosion rooms in early stages of growth. The cortices of basal reptiles are poorly vascularized, and osteocyte lacunae are common but randomly organized. Additionally, there is no evidence of fibrolamellar tissue organization around the vascular spaces. Compared with turtles, basal archosaurs show an increase in vascularization, better organized osteocytes, and some fibrolamellar tissue organization. In dinosaurs, including birds, vascularization is greater than in basal archosaurs, as is cortical thickness, and the osteocyte lacunae are more abundant and less randomly organized. Fibrolamellar tissues are evident around vascular canals and form organized primary osteons in older perinates and juveniles.Metaphyseal (“epiphyseal”) morphology varies with the acquisition of new features in derived groups. The cartilage cone, persistent through the Reptilia (crown-group reptiles, including birds), is completely calcified in ornithischian dinosaurs before it is eroded by marrow processes; cartilage canals, absent in basal archosaurs, are present in Dinosauria; a thickened calcified hypertrophy zone in Dinosauria indicates an acceleration of longitudinal bone growth.Variations in this set of histological synapomorphies overlap between birds and non-avian dinosaurs. In birds, these variations are strongly correlated with life-history strategies. This overlap, plus independent evidence from nesting sites, reinforces the hypothesis that variations in bone growth strategies in Mesozoic dinosaurs reflect different life-history strategies, including nesting behavior of neonates and parental care.

scholarly journals Coherent population dynamics associated with sockeye salmon juvenile life history strategies

2018 ◽  
Vol 75 (8) ◽  
pp. 1346-1356 ◽  
Author(s):  
Cameron Freshwater ◽  
Brian J. Burke ◽  
Mark D. Scheuerell ◽  
Sue C.H. Grant ◽  
Marc Trudel ◽  
...  
Keyword(s):  
Life History ◽  
Sockeye Salmon ◽  
Large Scale ◽  
Life History Strategies ◽  
Dynamic Factor ◽  
Fraser River ◽  
Conservation Units ◽  
Management Interventions ◽  
Salmon Juvenile ◽  
Scale Characteristics

Although the importance of diversity to maintaining metapopulation stability is widely recognized, the ecological characteristics that lead to synchronous dynamics within population aggregates are often unclear. We used a constrained dynamic factor analysis to explore patterns of covariance in productivity among 16 Fraser River sockeye salmon (Oncorhynchus nerka) conservation units (CUs). Specifically, we tested whether coherent trends in productivity covaried with five distinct ecological attributes: physical characteristics of nursery lakes, large-scale management interventions, genetic similarity, adult migration phenology, or juvenile migratory traits. The top-ranked model had two trends based on nursery lake characteristics and juvenile migratory traits. One trend represented the dynamics of CUs that rear in nursery lakes prior to ocean entry and undergo relatively rapid marine migrations. The second included a sea-type CU, Harrison River, which enters the marine environment without rearing in a nursery lake and migrates more slowly. The uniform response of lake-type CUs, as well as Harrison River CU’s unique life history, suggests that coherent trends are structured by traits that covary with broad life history type, rather than fine-scale characteristics. Furthermore, we document substantial temporal variability in the strength of synchronous dynamics among Fraser River CUs. Greater synchrony in recent years suggests that the importance of shared regional drivers, relative to local processes, may have increased.

scholarly journals Life-history Trait Variation in Native vs. Invasive Asexual New Zealand Mud Snails

2021 ◽  
Author(s):  
Carina Donne ◽  
Katelyn Larkin ◽  
Claire Adrian-Tucci ◽  
Abby Good ◽  
Carson Kephart ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Life History ◽  
New Zealand ◽  
Phenotypic Variation ◽  
Freshwater Snail ◽  
Life History Trait ◽  
Life History Variation ◽  
Trait Variation ◽  
Low Genetic Diversity ◽  
Native Diversity

Abstract Potamopyrgus antipodarum is a New Zealand freshwater snail that is invasive worldwide. While native P. antipodarum populations are characterized by frequent coexistence between obligately sexual and obligately asexual individuals, only the asexual snails are known to invade other ecosystems. Despite low genetic diversity and the absence of sex, invasive asexual P. antipodarum are highly successful. Here, we quantified variation in three key life-history traits across invasive P. antipodarum lineages and compared this variation to already documented variation in these same traits in asexual native lineages to provide a deeper understanding of why some lineages become invasive. In particular, we evaluated 1) if invasive lineages of P. antipodarum could be successful because they represent life-history variation from native ancestors that could facilitate invasion, and 2) if invasive populations with higher genetic variation would display relatively high phenotypic variation. We found that invasive snails displayed a non-representative sample of native diversity, with invasive snails growing more slowly and maturing more rapidly than their native counterparts. These results are consistent with expectations of a scenario where invasive lineages represent a subset of native variation that is beneficial in the setting of invasion. Nevertheless, there was no evidence for a relationship between genetic and phenotypic variation, indicating that increased genetic variation does not necessarily translate into greater phenotypic variation, and consistent with earlier studies suggesting an important role for phenotypic plasticity in the P. antipodarum invasion. Together, these results help illuminate the mechanisms driving the worldwide expansion of invasive populations of these snails.

scholarly journals Genome-wide DNA methylation predicts environmentally-driven life history variation in a marine fish

2021 ◽  
Author(s):  
Hugo Cayuela ◽  
Clément Rougeux ◽  
Martin Laporte ◽  
Claire Mérot ◽  
Eric Normandeau ◽  
...  
Keyword(s):  
Dna Methylation ◽  
Life History ◽  
Water Temperature ◽  
Intraspecific Variation ◽  
Marine Fish ◽  
Molecular Mechanisms ◽  
Hatching Success ◽  
Life History Strategies ◽  
Life History Variation ◽  
Genome Wide

AbstractThe molecular mechanisms underlying intraspecific variation in life history strategies are still poorly understood, despite the importance of this question for understanding of organism’s responses to environmental variability. Theoretical work proposed that epigenetic mechanisms such as DNA methylation might regulate intraspecific variation in life history strategies, however this assumption has rarely been verified empirically in wild populations. We examined associations between genome-wide methylation changes and environmentally-driven life history variation in two lineages of a marine fish that diverged approximatively 2.5 Mya, the capelin (Mallotus villosus), from North America and Europe. In both lineages, capelin harbour two contrasted life history strategies: some are strictly semelparous, experience fast actuarial senescence, but benefit from high hatching success by spawning on demersal sites where water temperature is low and relatively stable. In contrast, others are facultative iteroparous, have slower actuarial senescence, and suffer from lower hatching success by breeding in the intertidal zone where temperature is warmer, thermohaline parameters are less stable, and egg desiccation risk is high. Performing whole genome and epigenome sequencing, we showed that these contrasted life history strategies are more likely governed by epigenetic changes than by differences in DNA sequence. While genetic differentiation between the capelin harbouring different life history strategies was negligible, we detected parallel genome-wide methylation changes across lineages. We identified 1,067 differentially methylated regions (DMRs) comprising 15,818 CpGs, with 22% of them located within 5-kb around genes comprising promotor regions. We found that all DMRs were hypermethylated in demersal-spawning individuals. This striking result suggests that lower water temperature at demersal sites leads to an overall hypermethylation of the genome determined during the epigenetic reprogramming occurring over embryonic development. Our study emphasizes that parallel epigenetics changes in lineages with divergent genetic background could have a functional role in the regulation of intraspecific life history variation.

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