Why do so few animals form endosymbiotic associations with photosynthetic microbes?

1991 ◽  
Vol 333 (1267) ◽  
pp. 225-230 ◽  

A survey of modern associations in which protists or invertebrates are hosts shows that very few of the many species of photosynthetic microbes are adapted to an endosymbiotic existence. None occurs as intracellular symbionts in animals structurally more complex than cnidarians and platyhelminths. Photosynthetic symbionts are not usually capable of being the sole food source for hosts because they do not provide a balanced diet; most hosts therefore retain holozoic feeding. Interactions between hosts and intracellular symbionts are complex, and have to include mechanisms for inducing release of photosynthate from symbionts as well as controlling symbiont cell division. Possession of symbionts imposes a measurable cost on hosts. For the great majority of animals, the costs of adapting to herbivory or other forms of nutrition are probably less than that of hosting photosynthetic symbionts, especially when the need for exposure of a large surface area to light is borne in mind. Once hosts become multicellular, it is virtually impossible for any photosynthetic symbionts they possess to evolve into organelles because they are restricted to specific host cell types. After the evolution of the eukaryotic ancestors of plants in the late Precambrian, the major significance of endosymbiosis to the evolution of plant—animal interactions has been the development of gut symbioses in some major groups of herbivores.

Author(s):  
Christopher Hanlon

Emerson’s Memory Loss is about an archive of texts documenting Emerson’s intellectual state during the final phase of his life, as he underwent dementia. It is also about the way these texts provoke a rereading of the more familiar canon of Emerson’s thinking. Emerson’s memory loss, Hanlon argues, contributed to the shaping of a line of thought in America that emphasizes the social over the solipsistic, the affective over the distant, the many over the one. Emerson regarded his output during the time when his patterns of cognition transformed profoundly as a regathering of focus on the nature of memory and of thinking itself. His late texts theorize Emerson’s experience of senescence even as they disrupt his prior valorizations of the independent mind teeming with self-sufficient conviction. But still, these late writings have succumbed to a process of critical forgetting—either ignored by scholars or denied inclusion in Emerson’s oeuvre. Attending to a manuscript archive that reveals the extent to which Emerson collaborated with others—especially his daughter, Ellen Tucker Emerson—to articulate what he considered his most important work even as his ability to do so independently waned, Hanlon measures the resonance of these late texts across the stretch of Emerson’s thinking, including his writing about Margaret Fuller and his meditations on streams of thought that verge unto those of his godson, William James. Such ventures bring us toward a self defined less by its anxiety of overinfluence than by its communality, its very connectedness with myriad others.


2021 ◽  
Vol 8 (4) ◽  
pp. 42
Author(s):  
Sonia Stefanovic ◽  
Heather C. Etchevers ◽  
Stéphane Zaffran

Anomalies in the cardiac outflow tract (OFT) are among the most frequent congenital heart defects (CHDs). During embryogenesis, the cardiac OFT is a dynamic structure at the arterial pole of the heart. Heart tube elongation occurs by addition of cells from pharyngeal, splanchnic mesoderm to both ends. These progenitor cells, termed the second heart field (SHF), were first identified twenty years ago as essential to the growth of the forming heart tube and major contributors to the OFT. Perturbation of SHF development results in common forms of CHDs, including anomalies of the great arteries. OFT development also depends on paracrine interactions between multiple cell types, including myocardial, endocardial and neural crest lineages. In this publication, dedicated to Professor Andriana Gittenberger-De Groot and her contributions to the field of cardiac development and CHDs, we review some of her pioneering studies of OFT development with particular interest in the diverse origins of the many cell types that contribute to the OFT. We also discuss the clinical implications of selected key findings for our understanding of the etiology of CHDs and particularly OFT malformations.


1991 ◽  
Vol 29 (26) ◽  
pp. 104.1-104

Articles in the Bulletin have been unsigned since it began. This is because they aim to present a consensus view which incorporates contributions from many people, including specialists, general practitioners and members of the pharmaceutical industry, as well as the Bulletin’s Advisory Council. We are very grateful to them all, but although we have often been asked who they are, we cannot name the many hundreds who have helped us in any one year. However, we can at least name those not listed in our tailpiece who have taken a major share in the production of articles published in the last year, and do so now.


Author(s):  
Peter Nuthall

Abstract Over the decades, many researchers have explored the concept of intuition as a decision-making process. However, most of this research does not quantify the important aspects of intuition, making it difficult to fully understand its nature and improve the intuitive process, enabling an efficient method of decision-making. The research described here, through a review of the relevant literature, demystifies intuition as a decision system by isolating the important intuition determining variables and relating them to quantitative intuition research. As most farm decisions are made through intuition, farmers, consultants, researchers and students of farm management will find the review useful, stimulating efforts for improving decision-making skills in farmers. The literature search covered all journals and recent decades and includes articles that consider the variables to be targeted in improving intuitive skill. This provides a basis for thinking about intuition and its improvement within the farming world. It was found from the literature that most of the logical areas that should influence decisions do in fact do so and should be targeted in improving intuition. One of the most important improvement processes is a farmer's self-criticism skills through using a decision diary in conjunction with reflection and consultation leading to improved decisions. This must be in conjunction with understanding, and learning about, the many other variables also impacting on intuitive skill.


1924 ◽  
Vol 28 (159) ◽  
pp. 158-188
Keyword(s):  
The Many ◽  

I must apologise for the many shortcomings of this paper and plead in excuse that it has been very hurriedly prepared. When I was asked at short notice to write a paper in place of Squadron-Leader Maycock’s, I somewhat rashly undertook to do so, but it has proved a formidable task in the very limited time available.


eLife ◽  
2019 ◽  
Vol 8 ◽  
Author(s):  
Sinisa Hrvatin ◽  
Christopher P Tzeng ◽  
M Aurel Nagy ◽  
Hume Stroud ◽  
Charalampia Koutsioumpa ◽  
...  

Enhancers are the primary DNA regulatory elements that confer cell type specificity of gene expression. Recent studies characterizing individual enhancers have revealed their potential to direct heterologous gene expression in a highly cell-type-specific manner. However, it has not yet been possible to systematically identify and test the function of enhancers for each of the many cell types in an organism. We have developed PESCA, a scalable and generalizable method that leverages ATAC- and single-cell RNA-sequencing protocols, to characterize cell-type-specific enhancers that should enable genetic access and perturbation of gene function across mammalian cell types. Focusing on the highly heterogeneous mammalian cerebral cortex, we apply PESCA to find enhancers and generate viral reagents capable of accessing and manipulating a subset of somatostatin-expressing cortical interneurons with high specificity. This study demonstrates the utility of this platform for developing new cell-type-specific viral reagents, with significant implications for both basic and translational research.


2021 ◽  
Author(s):  
Asif Zubair ◽  
Richard H. Chapple ◽  
Sivaraman Natarajan ◽  
William C. Wright ◽  
Min Pan ◽  
...  

The disorganization of cell types within tissues underlies many human diseases and has been studied for over a century using the conventional tools of pathology, including tissue-marking dyes such as the H&E stain. Recently, spatial transcriptomics technologies were developed that can measure spatially resolved gene expression directly in pathology-stained tissues sections, revealing cell types and their dysfunction in unprecedented detail. In parallel, artificial intelligence (AI) has approached pathologist-level performance in computationally annotating H&E images of tissue sections. However, spatial transcriptomics technologies are limited in their ability to separate transcriptionally similar cell types and AI-based pathology has performed less impressively outside their training datasets. Here, we describe a methodology that can computationally integrate AI-annotated pathology images with spatial transcriptomics data to markedly improve inferences of tissue cell type composition made over either class of data alone. We show that this methodology can identify regions of clinically relevant tumor immune cell infiltration, which is predictive of response to immunotherapy and was missed by an initial pathologist's manual annotation. Thus, combining spatial transcriptomics and AI-based image annotation has the potential to exceed pathologist-level performance in clinical diagnostic applications and to improve the many applications of spatial transcriptomics that rely on accurate cell type annotations.


2021 ◽  
Author(s):  
Juan Jauregui-Lozano ◽  
Kimaya Bakhle ◽  
Vikki M. Weake

AbstractThe chromatin landscape defines cellular identity in multicellular organisms with unique patterns of DNA accessibility and histone marks decorating the genome of each cell type. Thus, profiling the chromatin state of different cell types in an intact organism under disease or physiological conditions can provide insight into how chromatin regulates cell homeostasisin vivo. To overcome the many challenges associated with characterizing chromatin state in specific cell types, we developed an improved approach to isolateDrosophilanuclei tagged with GFP expressed under Gal4/UAS control. Using this protocol, we profiled chromatin accessibility using Omni-ATAC, and examined the distribution of histone marks using ChIP-seq and CUT&Tag in adult photoreceptor neurons. We show that the chromatin landscape of photoreceptors reflects the transcriptional state of these cells, demonstrating the quality and reproducibility of our approach for profiling the transcriptome and epigenome of specific cell types inDrosophila.


1851 ◽  
Vol 141 ◽  
pp. 433-459 ◽  

Among the many discussions to which the subject of madder has given rise among chemists, there is none which is calculated to excite so much interest as that concern­ing the state in which the colouring matter originally exists in this root, and there is no part of this extensive subject which is at the same time involved in such obscurity. It is a well-known fact that the madder root is not well adapted for the purposes of dyeing until it has attained a growth of from eighteen months to three years, and that after being gathered and dried it gradually improves for several years, after which it again deteriorates. During the time when left to itself, especially if in a state of powder, it increases in weight and bulk, in consequence probably of absorp­tion of moisture from the air, and some chemical change is effected, which, though not attended by any striking phenomena, is sufficiently well indicated by its results. There are few chemical investigations that have thrown any light on the nature of the process which takes place during this lapse of time, and in fact most of the at­tempts to do so have merely consisted of arguments based on analogy. It has been surmised that the process is one of oxidation, and that the access of atmospheric air is consequently necessary. We are indeed acquainted with cases, in which substances of well-defined character and perfectly colourless, as for instance orcine and hematoxyline, are converted by the action of oxygen, or oxygen and alkalies combined, into true colouring matters. A more general supposition is, that the process is one of fermentation, attended perhaps by oxidation, and in confirmation of this view the formation of indigo-blue from a colourless plant, by a process which has all the cha­racters of one of fermentation, may be adduced. What the substance is however on which this process of oxidation or fermentation takes effect, what the products are which are formed by it, whether indeed the change is completed as soon as the madder has reached the point when it is best adapted for dyeing, or whether further changes take place when it is mixed with water and the temperature raised during the process of dyeing, are questions which have never been satisfactorily answered, if answered at all. It has indeed been suspected by several chemists, that there exists originally some substance in madder, which by the action of fermentation or oxida­tion is decomposed and gives rise by its decomposition to the various substances endowed either with a red or yellow colour, which have been discovered during the chemical investigations of this root. That several of these substances are merely mixtures, and some of them in the main identical, has been satisfactorily proved by late investigators. But there still remain a number, which, though extremely similar, have properties sufficiently marked to entitle them to be considered as distinct. In my papers on the colouring matters of madder, I have described four substances derived from madder, only one of which is a true colouring matter, but all of them capable, under certain circumstances, as for instance in combination with alkalies, of developing red or purple colours of various intensity. To seek for a common origin for these various bodies so similar to one another and yet distinct, is very natural, and the discovery of it no improbable achievement.


1905 ◽  
Vol s2-49 (195) ◽  
pp. 493-505
Author(s):  
M. D. HILL

Although the foregoing accouut is obviously incomplete, yet it is possible to draw some conclusions. I believe we have shown that: (a) The egg of Aleyonium produces no polar bodies in the ordinary sense of the word. (b) That the division of the female pronucleus before the entrance of the spermatozoon is irregular and amitotic. (c) That no chromatiu leaves the egg in the stage of ovocyte I, to use Boveri's nomenclature. (d) That the female pronucleus completely disappears. (s) That there are no bodies that can be termed chromosomes throughout the whole process. (f) That the first segmentation nucleus is formed in a way (unknown) that must in any case be unlike anything hitherto described. Furthermore I believe, though I cannot state so positively, that: (g) A process takes place that may roughly be compared to the formation of polar bodies, but they disintegrate and do not leave the cell. So far as I have ascertained nothing in the shape of extrusion takes place. It is, however, curious to note that the nearest account that I have been able to find of like behaviour in an egg nucleus is that of Sfcoeckel.1 This author found in a human ovary certain of the ova containing large nuclei, the membrane of which, as a rule, was well marked, but "oft geht diese scharfe Abgrenzung auch verloren. Die Konturen werden unregelmässeg Zackig, verschwommen."...Stoeckel believed that these changes in form were the beginning of amitotic nuclear divisions, giving rise to binucleated ova, of which he found several. I know of no other assumption of the direct division of an egg nucleus before fertilisation. (h) The first segmentation nucleus is derived from the male pronucleus, though it is quite possible that chromatin equal in amount to that of the male may also be derived from the female pronucleus, though all trace of the latter has been lost. If the foregoing statements be only partially true, it is obvious that a great gulf is fixed between the maturation processes in the egg of Alcyonium and all hitherto described cases. For this reason I am very loth to do more than state the bare conclusions to which I have come. To the best of my belief, no author has described amitotic nuclear divisions in the formation of polar bodies. We seem to have to deal with perfectly abnormal conditions. Nevertheless we are forced to admit that the maintenance of the individual parental chromosomes in a fertilised egg-cell is not universal. On the contrary, all trace of the chromatin of the original egg nucleus is lost. Furthermore, there are several instances among the protozoa of the breaking up and reorganisation of the nucleus. This occurs in many Ciliates. For instance : In ‘Oxytricha and Lacrymaria’ Gruber has shown that the meganucleus breaks up into minute fragments which become scattered through the protoplasm, but eventually reunite into a single body. So much attractive speculation has been based on the ordinarily observed facts of maturation and fertilisation that we feel almost bound to assume that these processes are the same iu all metazoa. But it is obvious that in certain cœlenterates we have facts before us that cannot be brought into line with what we feel we have a right to expect. At present the affair is a mystery. Pending farther investigation it were unwise to speculate on the possible meaning of these phenomena, however much one may be tempted to do so. In case that what I have observed, and still more failed to observe, may induce some other zoologist to follow this cytological byeway, I can only hope that he will find this paper a path over which it may not be necessary to retrace his steps. There would seem to be four points to which attention should be specially directed: (a) The nuclear history of the germ-cells from their earliest "Anlagen." (b) The mode of formation of the polar bodies. (c) The actual penetration of the spermatozoon. (d) The way in which the first segmentation nucleus is built up. Lastly, I have but to express my sincere thanks to Professor Hickson for his kindness in allowing me the use of his material, preparations, and notes, and for the many fruitful suggestions that I have received from him.


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