scholarly journals Quantifying the dynamics of pig movements improves targeted disease surveillance and control plans

2019 ◽  
Author(s):  
Gustavo Machado ◽  
Jason Ardila Galvis ◽  
Francisco Paulo Nunes Lopes ◽  
Joana Voges ◽  
Antônio Augusto Rosa Medeiros ◽  
...  
Keyword(s):  
Disease Control ◽  
Disease Surveillance ◽  
Control Strategies ◽  
Disease Spread ◽  
Growth Stages ◽  
Case Scenario ◽  
Modeling Framework ◽  
Worst Case ◽  
Movement Data ◽  
The Impact

SummaryTracking animal movements over time can fundamentally determine the success of disease control interventions throughout targeting farms that are tightly connected. In commercial pig production, animals are transported between farms based on growth stages, thus it generates time-varying contact networks that will influence the dynamics of disease spread. Still, risk-based surveillance strategies are mostly based on a static network. In this study, we reconstructed the static and temporal pig networks of one Brazilian state from 2017 to 2018, comprising 351,519 movements and 48 million transported pigs. The static networks failed to capture time-respecting movement pathways. Therefore, we propose a time-dependent network susceptible-infected (SI) model to simulate the temporal spread of an epidemic over the pig network globally through the temporal movement of animals among farms, and locally with a stochastic compartmental model in each farm, configured to calculate the minimum number of target farms needed to achieve effective disease control. In addition, we propagated disease on the pig temporal network to calculate the cumulative contacts as a proxy of epidemic sizes and evaluated the impact of network-based disease control strategies. The results show that targeting the first 1,000 farms ranked by degree would be sufficient and feasible to diminish disease spread considerably. Our finding also suggested that assuming a worst-case scenario in which every movement transmit disease, pursuing farms by degree would limit the transmission to up to 29 farms over the two years period, which is lower than the number of infected farms for random surveillance, with epidemic sizes of 2,593 farms. The top 1,000 farms could benefit from enhanced biosecurity plans and improved surveillance, which constitute important next steps in strategizing targeted disease control interventions. Overall, the proposed modeling framework provides a parsimonious solution for targeted disease surveillance when temporal movement data is available.

scholarly journals Variation in human mobility and its impact on the risk of future COVID-19 outbreaks in Taiwan

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Meng-Chun Chang ◽  
Rebecca Kahn ◽  
Yu-An Li ◽  
Cheng-Sheng Lee ◽  
Caroline O. Buckee ◽  
...  
Keyword(s):  
Disease Surveillance ◽  
Initial Conditions ◽  
Human Mobility ◽  
Human Movement ◽  
Disease Spread ◽  
Spatial Spread ◽  
Movement Data ◽  
Intercity Travel ◽  
Travel Restrictions ◽  
The Impact

Abstract Background As COVID-19 continues to spread around the world, understanding how patterns of human mobility and connectivity affect outbreak dynamics, especially before outbreaks establish locally, is critical for informing response efforts. In Taiwan, most cases to date were imported or linked to imported cases. Methods In collaboration with Facebook Data for Good, we characterized changes in movement patterns in Taiwan since February 2020, and built metapopulation models that incorporate human movement data to identify the high risk areas of disease spread and assess the potential effects of local travel restrictions in Taiwan. Results We found that mobility changed with the number of local cases in Taiwan in the past few months. For each city, we identified the most highly connected areas that may serve as sources of importation during an outbreak. We showed that the risk of an outbreak in Taiwan is enhanced if initial infections occur around holidays. Intracity travel reductions have a higher impact on the risk of an outbreak than intercity travel reductions, while intercity travel reductions can narrow the scope of the outbreak and help target resources. The timing, duration, and level of travel reduction together determine the impact of travel reductions on the number of infections, and multiple combinations of these can result in similar impact. Conclusions To prepare for the potential spread within Taiwan, we utilized Facebook’s aggregated and anonymized movement and colocation data to identify cities with higher risk of infection and regional importation. We developed an interactive application that allows users to vary inputs and assumptions and shows the spatial spread of the disease and the impact of intercity and intracity travel reduction under different initial conditions. Our results can be used readily if local transmission occurs in Taiwan after relaxation of border control, providing important insights into future disease surveillance and policies for travel restrictions.

scholarly journals Impact of Xylella fastidiosa subspecies pauca in European olives

2020 ◽  
Vol 117 (17) ◽  
pp. 9250-9259 ◽  
Author(s):  
Kevin Schneider ◽  
Wopke van der Werf ◽  
Martina Cendoya ◽  
Monique Mourits ◽  
Juan A. Navas-Cortés ◽  
...  
Keyword(s):  
Xylella Fastidiosa ◽  
Plant Diseases ◽  
Disease Spread ◽  
Economic Damage ◽  
Climatic Suitability ◽  
Case Scenario ◽  
Worst Case ◽  
Ongoing Research ◽  
Phytosanitary Measures ◽  
The Impact

Xylella fastidiosa is the causal agent of plant diseases that cause massive economic damage. In 2013, a strain of the bacterium was, for the first time, detected in the European territory (Italy), causing the Olive Quick Decline Syndrome. We simulate future spread of the disease based on climatic-suitability modeling and radial expansion of the invaded territory. An economic model is developed to compute impact based on discounted foregone profits and losses in investment. The model projects impact for Italy, Greece, and Spain, as these countries account for around 95% of the European olive oil production. Climatic suitability modeling indicates that, depending on the suitability threshold, 95.5 to 98.9%, 99.2 to 99.8%, and 84.6 to 99.1% of the national areas of production fall into suitable territory in Italy, Greece, and Spain, respectively. For Italy, across the considered rates of radial range expansion the potential economic impact over 50 y ranges from 1.9 billion to 5.2 billion Euros for the economic worst-case scenario, in which production ceases after orchards die off. If replanting with resistant varieties is feasible, the impact ranges from 0.6 billion to 1.6 billion Euros. Depending on whether replanting is feasible, between 0.5 billion and 1.3 billion Euros can be saved over the course of 50 y if disease spread is reduced from 5.18 to 1.1 km per year. The analysis stresses the necessity to strengthen the ongoing research on cultivar resistance traits and application of phytosanitary measures, including vector control and inoculum suppression, by removing host plants.

scholarly journals A modeling study to inform screening and testing interventions for the control of SARS-CoV-2 on university campuses

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ben Lopman ◽  
Carol Y. Liu ◽  
Adrien Le Guillou ◽  
Andreas Handel ◽  
Timothy L. Lash ◽  
...  
Keyword(s):  
Cumulative Incidence ◽  
Disease Surveillance ◽  
Control Strategies ◽  
Transmission Model ◽  
University Administrators ◽  
Modeling Framework ◽  
University Campuses ◽  
School Year ◽  
Flexible Modeling ◽  
Resource Requirements

AbstractUniversity administrators face decisions about how to safely return and maintain students, staff and faculty on campus throughout the 2020–21 school year. We developed a susceptible-exposed-infectious-recovered (SEIR) deterministic compartmental transmission model of SARS-CoV-2 among university students, staff, and faculty. Our goals were to inform planning at our own university, Emory University, a medium-sized university with around 15,000 students and 15,000 faculty and staff, and to provide a flexible modeling framework to inform the planning efforts at similar academic institutions. Control strategies of isolation and quarantine are initiated by screening (regardless of symptoms) or testing (of symptomatic individuals). We explored a range of screening and testing frequencies and performed a probabilistic sensitivity analysis. We found that among students, monthly and weekly screening can reduce cumulative incidence by 59% and 87%, respectively, while testing with a 2-, 4- and 7-day delay between onset of infectiousness and testing results in an 84%, 74% and 55% reduction in cumulative incidence. Smaller reductions were observed among staff and faculty. Community-introduction of SARS-CoV-2 onto campus may be controlled with testing, isolation, contract tracing and quarantine. Screening would need to be performed at least weekly to have substantial reductions beyond disease surveillance. This model can also inform resource requirements of diagnostic capacity and isolation/quarantine facilities associated with different strategies.

scholarly journals Cattle trade between and within biomes in the state of Mato Grosso, Brazil

2018 ◽  
Vol 38 (11) ◽  
pp. 2023-2028
Author(s):  
Rísia L. Negreiros ◽  
José H.H. Grisi-Filho ◽  
Ricardo A. Dias ◽  
Fernando Ferreira ◽  
Valéria S.F. Homem ◽  
...  
Keyword(s):  
Infectious Diseases ◽  
Animal Movement ◽  
Control Strategies ◽  
The State ◽  
Disease Spread ◽  
Mato Grosso ◽  
Movement Data ◽  
Cattle Movements ◽  
Increased Risk ◽  
And Control

ABSTRACT: The analysis of animal movement patterns may help identify farm premises with a potentially high risk of infectious disease introduction. Farm herd sizes and bovine movement data from 2007 in the state of Mato Grosso, Brazil, were analyzed. There are three different biomes in Mato Grosso: the Amazon, Cerrado, and Pantanal. The analysis of the animal trade between and within biomes would enable characterization of the connections between the biomes and the intensity of the internal trade within each biome. We conducted the following analyses: 1) the concentration of cattle on farm premises in the state and in each biome, 2) the number and relative frequency of cattle moved between biomes, and 3) the most frequent purposes for cattle movements. Twenty percent (20%) of the farm premises had 81.15% of the herd population. Those premises may be important not only for the spread of infectious diseases, but also for the implementation of surveillance and control strategies. Most of the cattle movement was intrastate (97.1%), and internal movements within each biome were predominant (88.6%). A high percentage of movement from the Pantanal was to the Cerrado (48.6%), the biome that received the most cattle for slaughter, fattening and reproduction (62.4%, 56.8%, and 49.1% of all movements for slaughter, fattening, and reproduction, respectively). The primary purposes for cattle trade were fattening (43.5%), slaughter (31.5%), and reproduction (22.7%). Presumably, movements for slaughter has a low risk of disease spread. In contrast, movements for fattening and reproduction purposes (66.2% of all movements) may contribute to an increased risk of the spread of infectious diseases.

scholarly journals SPATIOTEMPORAL VISUALIZATION OF TSUNAMI WAVES USING KML ON GOOGLE EARTH

2017 ◽  
Vol XLII-2/W7 ◽  
pp. 1291-1299 ◽  
Author(s):  
H. Mohammadi ◽  
M. R. Delavar ◽  
M. A. Sharifi ◽  
M. D. Pirooz
Keyword(s):  
Decision Making ◽  
Disaster Management ◽  
Google Earth ◽  
Disaster Mitigation ◽  
Case Scenario ◽  
Worst Case ◽  
Tsunami Waves ◽  
Spatiotemporal Visualization ◽  
Virtual Globes ◽  
The Impact

Disaster risk is a function of hazard and vulnerability. Risk is defined as the expected losses, including lives, personal injuries, property damages, and economic disruptions, due to a particular hazard for a given area and time period. Risk assessment is one of the key elements of a natural disaster management strategy as it allows for better disaster mitigation and preparation. It provides input for informed decision making, and increases risk awareness among decision makers and other stakeholders. Virtual globes such as Google Earth can be used as a visualization tool. Proper spatiotemporal graphical representations of the concerned risk significantly reduces the amount of effort to visualize the impact of the risk and improves the efficiency of the decision-making process to mitigate the impact of the risk. The spatiotemporal visualization of tsunami waves for disaster management process is an attractive topic in geosciences to assist investigation of areas at tsunami risk. In this paper, a method for coupling virtual globes with tsunami wave arrival time models is presented. In this process we have shown 2D+Time of tsunami waves for propagation and inundation of tsunami waves, both coastal line deformation, and the flooded areas. In addition, the worst case scenario of tsunami on Chabahar port derived from tsunami modelling is also presented using KML on google earth.

scholarly journals Hepatitis B virus infection in Nigeria: a systematic review and meta-analysis of data published between 2010 and 2019

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Busayo I. Ajuwon ◽  
Isabelle Yujuico ◽  
Katrina Roper ◽  
Alice Richardson ◽  
Meru Sheel ◽  
...  
Keyword(s):  
Systematic Review ◽  
Hepatitis B Virus ◽  
Hepatitis B ◽  
Disease Surveillance ◽  
Control Strategies ◽  
Meta Analysis ◽  
Population Based ◽  
North West ◽  
B Virus ◽  
The Impact

Abstract Background Hepatitis B virus (HBV) is an infectious disease of global significance, causing a significant health burden in Africa due to complications associated with infection, such as cirrhosis and liver cancer. In Nigeria, which is considered a high prevalence country, estimates of HBV cases are inconsistent, and therefore additional clarity is required to manage HBV-associated public health challenges. Methods A systematic review of the literature (via PubMed, Advanced Google Scholar, African Index Medicus) was conducted to retrieve primary studies published between 1 January 2010 and 31 December 2019, with a random-effects model based on proportions used to estimate the population-based prevalence of HBV in the Nigerian population. Results The final analyses included 47 studies with 21,702 participants that revealed a pooled prevalence of 9.5%. A prevalence estimate above 8% in a population is classified as high. Sub-group analyses revealed the highest HBV prevalence in rural settings (10.7%). The North West region had the highest prevalence (12.1%) among Nigeria’s six geopolitical zones/regions. The estimate of total variation between studies indicated substantial heterogeneity. These variations could be explained by setting and geographical region. The statistical test for Egger’s regression showed no evidence of publication bias (p = 0.879). Conclusions We present an up-to-date review on the prevalence of HBV in Nigeria, which will provide critical data to optimise and assess the impact of current prevention and control strategies, including disease surveillance and diagnoses, vaccination policies and management for those infected.

A Case Study - Life Extension of Offshore Bridge Bearings

2021 ◽  
Author(s):  
Ahmed Abdelkhalek ◽  
Govindavilas Sudhesh ◽  
Anjan Sarkar ◽  
Mohammed Eissa
Keyword(s):  
Cost Savings ◽  
Holistic Approach ◽  
Life Extension ◽  
Case Scenario ◽  
Worst Case ◽  
Maintenance And Repair ◽  
Seasonal Monitoring ◽  
The Impact ◽  
Bridge Bearings

Abstract Structural bearings of 47 offshore platform-link bridges with average age of 40 years were inspected and recommended for replacements due to their poor condition. Replacement of bridge bearings involves major risk and production interruptions given the structural modifications, and critical piping and E&I disconnections required for safe jacking-lifting activities required during the process. This paper presents the approach adopted to assure the integrity of the bridges and extend their lives without the need to replace the bearings. The approach employed failure mode and effect analysis to identifying and narrowing down areas that need focused efforts while tackling the problem. Scenario based structural assessments were carried out to examine the impact of the level of movement-allowing bearings functionality on the integrity of the bridge and its supporting structures; identify critical locations to be targeted during focused inspections; and establish envelopes for monitoring thermal expansion and contraction of the bridges. Guidelines were developed and implemented for integrated inspection-maintenance and repair campaign, which aimed to tackle corrosion issues and to install movement-monitoring indicators. Indicator seasonal monitoring is employed to establish the functionality of bearings on the long-term. The what-if structural assessments revealed that even in the worst-case scenario (in which the bearing are completely jammed) the option of local strengthening of the bridge and its supporting elements is more attractive than bearing replacement. The integrated inspection-maintenance and repair campaigns revealed that excessive corrosion levels observed from historic visual inspections on external non-critical bearing components (e.g: guide plates, angles, etc.) is not indicative of the condition of the internal load-bearing components (pedestals) which experienced much lower corrosion levels. The seasonal monitoring of bridge movements revealed that the 40+ years old Teflon pads are still functional and allow the bridges expansion and contraction. The developed holistic approach enabled demonstration of the fitness for service of the bearings, and provided means for assuring their long-term performance through monitoring. The results assured safety, integrity and delivered significant cost savings through aversion brownfield modifications, and production loss associated with bridge jacking and bearing replacement operations.

scholarly journals Imported dengue in Spain: a nationwide analysis with predictive time series analyses

2019 ◽  
Vol 26 (8) ◽  
Author(s):  
Lidia Redondo-Bravo ◽  
Claudia Ruiz-Huerta ◽  
Diana Gomez-Barroso ◽  
María José Sierra-Moros ◽  
Agustín Benito ◽  
...  
Keyword(s):  
Time Series ◽  
Control Measures ◽  
Severe Dengue ◽  
Vector Surveillance ◽  
Case Scenario ◽  
Worst Case ◽  
Temporal Behaviour ◽  
The Impact ◽  
Near Future ◽  
Local Transmission

Abstract Background Of febrile illnesses in Europe, dengue is second only to malaria as a cause of travellers being hospitalized. Local transmission has been reported in several European countries, including Spain. This study assesses the evolution of dengue-related admissions in Spain in terms of time, geographical distribution and individuals’ common characteristics; it also creates a predictive model to evaluate the risk of local transmission. Methods This is a retrospective study using the Hospital Discharge Records Database from 1997 to 2016. We calculated hospitalization rates and described clinical characteristics. Spatial distribution and temporal behaviour were also assessed, and a predictive time series model was created to estimate expected cases in the near future. Figures for resident foreign population, Spanish residents’ trips to endemic regions and the expansion of Aedes albopictus were also evaluated. Results A total of 588 dengue-related admissions were recorded: 49.6% were women, and the mean age was 34.3 years. One person died (0.2%), 82% presented with mild-to-moderate dengue and 7–8% with severe dengue. We observed a trend of steady and consistent increase in incidence (P < 0.05), in parallel with the increase in trips to dengue-endemic regions. Most admissions occurred during the summer, showing significant seasonality with 3-year peaks. We also found important regional differences. According to the predictive time series analysis, a continuing increase in imported dengue incidence can be expected in the near future, which, in the worst case scenario (upper 95% confidence interval), would mean an increase of 65% by 2025. Conclusion We present a nationwide study based on hospital, immigration, travel and entomological data. The constant increase in dengue-related hospitalizations, in combination with wider vector distribution, could imply a higher risk of autochthonous dengue transmission in the years to come. Strengthening the human and vector surveillance systems is a necessity, as are improvements in control measures, in the education of the general public and in fostering their collaboration in order to reduce the impact of imported dengue and to prevent the occurrence of autochthonous cases.

Assembly System Configuration Design for Reconfigurability Under Uncertain Production Evolution

2019 ◽  
Vol 141 (7) ◽  
Author(s):  
Zhengqian Jiang ◽  
Hui Wang ◽  
Maxim A. Dulebenets ◽  
Junayed Pasha
Keyword(s):  
System Throughput ◽  
Assembly System ◽  
Configuration Design ◽  
System Configuration ◽  
Case Scenario ◽  
Worst Case ◽  
Design Evolution ◽  
Product Evolution ◽  
Concurrent Optimization ◽  
The Impact

Assembly system configuration determines the topological arrangement of stations with defined logical material flow among them. The design of assembly system configuration involves (1) subassembly planning that defines subassembly tasks and between-task material flows and (2) workload balancing that determines the task-station assignments. The assembly system configuration should be flexibly changed and updated to cope with product design evolution and updating. However, the uncertainty in future product evolution poses significant challenges to the assembly system configuration design since the higher cost can be incurred if the assembly line suitable for future products is very different from that for the current products. The major challenges include (1) the estimation of reconfiguration cost, (2) unavailability of probability values for possible scenarios of product evolution, and (3) consideration of the impact of the subassembly planning on the task-station assignments. To address these challenges, this paper formulates a concurrent optimization problem to design the assembly system configuration by jointly determining the subassembly planning and task-station assignments considering uncertain product evolution. A new assembly hierarchy similarity model is proposed to estimate the reconfiguration effort by comparing the commonalities among different subassembly plans of current and potential future product designs. The assembly system configuration is chosen by maximizing both assembly hierarchy similarity and assembly system throughput under the worst-case scenario. A case study motivated by real-world scenarios demonstrates the applicability of the proposed method including scenario analysis.

The Impact of Flexbarrier Ingress on Flexlok Stress

2009 ◽  
Author(s):  
Jing Lu ◽  
Frank Ma ◽  
Zhimin Tan ◽  
Terry Sheldrake
Keyword(s):  
Internal Pressure ◽  
Structural Function ◽  
Analysis Model ◽  
Flexible Pipe ◽  
Case Scenario ◽  
Element Analysis ◽  
Worst Case ◽  
Ongoing Research ◽  
Nominal Size ◽  
The Impact

An unbonded flexible pipe typically consists of multiple metallic and thermoplastic layers, where each layer is designed to provide a specific structural function. The burst resistance against the internal pressure in an unbonded flexible pipe is provided mainly by its Flexlok layer. The Flexlok is made by helically-wound steel wires, with neighbouring wires interlocking each other. Beneath the Flexlok is the Flexbarrier, a polymer layer, acting as the boundary for conveyed fluids. The internal pressure is passed onto the Flexlok through the Flexbarrier layer. Under internal pressure, the Flexbarrier can creep into the gaps between Flexlok wires. Theoretically, the polymer material ingress could reduce the flexibility of the Flexlok due to premature lock-up between Flexlok wires and subsequently increase the stress levels. This study presents a 3D finite element analysis model developed to quantify the stress elevation in the Flexlok wire, caused by the Flexbarrier layer ingress. In terms of Flexlok gap size distribution, both nominal and worst case scenarios are studied. In the nominal scenario, the Flexlok gap sizes are evenly distributed. In the worst case scenario, the Flexlok gap is assumed to be completely closed at one position while the gaps at the neighbouring positions are twice the nominal size. Flexbarrier ingress with different temperatures is also studied. Conclusions are obtained by analyzing the simulation results. The work presented is part of an ongoing research and development project.

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