scholarly journals SALARECON connects the Atlantic salmon genome to growth and feed efficiency

2021 ◽  
Author(s):  
Maksim Zakhartsev ◽  
Filip Rotnes ◽  
Marie Gulla ◽  
Ove Øyås ◽  
Jesse C. J. van Dam ◽  
...  
Keyword(s):  
Amino Acids ◽  
Atlantic Salmon ◽  
Feed Efficiency ◽  
Metabolic Model ◽  
Quality Model ◽  
Farmed Fish ◽  
Feed Ingredients ◽  
Metabolic Fluxes ◽  
Commercial Feed ◽  
Limiting Amino Acids

Background: Atlantic salmon (Salmo salar) is the most valuable farmed fish globally and there is much interest in optimizing its genetics and conditions for growth and feed efficiency. Also, marine feed ingredients must be replaced to meet global demand with challenges for fish health and sustainability. Metabolic models can address this by connecting genomes to metabolism, which is what converts nutrients in the feed to energy and biomass, but they are currently not available for major aquaculture species such as salmon. Results: We present SALARECON, a metabolic model that links the Atlantic salmon genome to metabolic fluxes and growth. It performs well in standardized tests and reflects expected metabolic (in)capabilities. We show that it can explain observed growth under hypoxia in terms of metabolic fluxes and apply it to aquaculture by simulating growth with commercial feed ingredients. Predicted feed efficiencies and limiting amino acids agree with data, and the model suggests that marine feed efficiency can be achieved by supplementing a few amino acids to plant- and insect-based feeds. Conclusion: SALARECON is a high-quality model that makes it possible to simulate Atlantic salmon metabolism and growth from the genome. It can explain Atlantic salmon physiology and address key challenges in aquaculture.

Apparent and true availability of amino acids from common feed ingredients for Atlantic salmon (Salmo salar) reared in sea water

Aquaculture ◽  
1992 ◽  
Vol 108 (1-2) ◽  
pp. 111-124 ◽  
Author(s):  
J. Stewart Anderson ◽  
Santosh P. Lall ◽  
Derek M. Anderson ◽  
Jayantha Chandrasoma
Keyword(s):  
Amino Acids ◽  
Atlantic Salmon ◽  
Salmo Salar ◽  
Sea Water ◽  
Feed Ingredients ◽  
Atlantic Salmon Salmo Salar

The use of hydroxyproline analyses to predict the nutritional value of the protein in different animal tissues

1972 ◽  
Vol 27 (3) ◽  
pp. 475-481 ◽  
Author(s):  
Z. Dvořák
Keyword(s):  
Amino Acids ◽  
Nutritional Value ◽  
Amino Acid Content ◽  
Close Correlation ◽  
Regression Equations ◽  
Animal Tissues ◽  
Chemical Score ◽  
Limiting Amino Acids ◽  
Net Protein ◽  
Total Amino Acids

1. The amounts of available cystine and tyrosine in the protein of different animal tissues showed a close correlation with the level of hydroxyproline, and may be estimated from hydroxyproline values by regression equations.2. Estimates of ‘chemical score’ have been calculated from the content of hydroxyproline determined in a series of samples for which net protein utilization (NPU) for rats had also been determined. Chemical scores calculated as percentages of the total ‘essential+semiessential’ amino acid content of each material correlated closely with NPU, whereas scores calculated as percentages of total amino acids did not. ‘Methionine+cystine’ were calculated to be first limiting amino acids in every sample.

scholarly journals The Effect of Glycomacropeptide versus Amino Acids on Phenylalanine and Tyrosine Variability over 24 Hours in Children with PKU: A Randomized Controlled Trial

Nutrients ◽  
2019 ◽  
Vol 11 (3) ◽  
pp. 520 ◽  
Author(s):  
Anne Daly ◽  
Sharon Evans ◽  
Satnam Chahal ◽  
Saikat Santra ◽  
Alex Pinto ◽  
...  
Keyword(s):  
Amino Acids ◽  
Controlled Trial ◽  
Target Range ◽  
Blood Spots ◽  
Meal Plan ◽  
Significant Difference ◽  
Randomised Controlled ◽  
Limiting Amino Acids ◽  
The Impact ◽  
Rate Limiting

Introduction: In phenylketonuria (PKU), evidence suggests that casein glycomacropeptide supplemented with rate-limiting amino acids (CGMP-AA) is associated with better protein utilisation and less blood phenylalanine (Phe) variability. Aim: To study the impact of CGMP-AA on blood Phe variability using 3 different dietary regimens in children with PKU. Methods: This was a 6-week randomised controlled cross-over study comparing CGMP-AA vs. Phe-free l-amino acids (l-AA) assessing blood Phe and tyrosine (Tyr) variability over 24 h in 19 children (7 boys) with PKU, with a median age of 10 years (6–16). Subjects were randomised to 3 dietary regimens: (1) R1, CGMP-AA and usual dietary Phe (CGMP + Phe); (2) R2, CGMP-AA − Phe content of CGMP-AA from usual diet (CGMP − Phe); and (3) R3, l-AA and usual dietary Phe. Each regimen was administered for 14 days. Over the last 48 h on days 13 and 14, blood spots were collected every 4 h at 08 h, 12 h, 16 h, 20 h, 24 h, and 04 h. Isocaloric intake and the same meal plan and protein substitute dosage at standardised times were maintained when blood spots were collected. Results: Eighteen children completed the study. Median Phe concentrations over 24 h for each group were (range) R1, 290 (30–580), R2, 220 (10–670), R3, 165 (10–640) μmol/L. R1 vs. R2 and R1 vs. R3 p < 0.0001; R2 vs. R3 p = 0.0009. There was a significant difference in median Phe at each time point between R1 vs. R2, p = 0.0027 and R1 vs. R3, p < 0.0001, but not between any time points for R2 vs. R3. Tyr was significantly higher in both R1 and R2 [70 (20–240 μmol/L] compared to R3 [60 (10–200) μmol/L]. In children < 12 years, blood Phe remained in the target range (120–360 μmol/L), over 24 h, for 75% of the time in R1, 72% in R2 and 64% in R3; for children aged ≥ 12 years, blood Phe was in target range (120–600 μmol/L) in R1 and R2 for 100% of the time, but 64% in R3. Conclusions: The residual Phe in CGMP-AA increased blood Phe concentration in children. CGMP-AA appears to give less blood Phe variability compared to l-AA, but this effect may be masked by the increased blood Phe concentrations associated with its Phe contribution. Reducing dietary Phe intake to compensate for CGMP-AA Phe content may help.

scholarly journals Penambahan Lisin pada Pakan Komersial terhadap Retensi Protein dan Retensi Energi Ikan Bawal Air Tawar (Colossoma macropomum) [Lysine Addition on Commercial Feed to the Protein Retention and Energy Retention Colossoma macropomum]

2017 ◽  
Vol 9 (2) ◽  
pp. 98 ◽  
Author(s):  
Afifa Khalida ◽  
Agustono Agustono ◽  
Widya Paramita
Keyword(s):  
Amino Acids ◽  
Essential Amino Acids ◽  
Quality Parameters ◽  
The Body ◽  
Colossoma Macropomum ◽  
Protein Retention ◽  
Body Tissues ◽  
Commercial Feed ◽  
Energy Retention ◽  
Range Test

                                                                   AbstrakAsam amino adalah komponen terkecil yang menyusun protein. Sejumlah asam amino akan dihubungkan satu sama lain melalui perantara ikatan peptida untuk membentuk protein. Asam amino telah dibagi menjadi dua; yaitu asam amino esensial dan asam amino non-esensial. Asam amino esensial adalah asam amino yang tidak dapat disintesis oleh tubuh ikan; karena itu asam amino esensial harus ada dalam pakan. Lisin adalah salah satu dari sepuluh asam amino esensial, fungsi lisin adalah untuk pertumbuhan dan perbaikan jaringan tubuh. Penelitian ini bertujuan untuk mengetahui pengaruh lisin dalam pakan komersial terhadap retensi protein dan retensi energi ikan bawal air tawar. Metode yang digunakan adalah desain eksperimen rancangan acak lengkap. Perlakuan yang digunakan adalah kadar lisin yang berbeda, yaitu P0 (0%), P1 (0,6%), P2 (1,2%), P3 (2,4%), P4 (4,8%) dan perlakuan  diulang 4 kali. Parameter utama yang diamati adalah retensi protein dan retensi energi pada air tawar bawal. Parameter yang diukur didukung oleh parameter kualitas air. Analisis data menggunakan Analisis Varian (ANOVA) dan untuk menentukan perlakuan terbaik digunakan Duncan's multiple range test. Hasil penelitian menunjukkan perbedaan yang signifikan (p <0,05) dalam retensi protein dan energi adalah daging ikan bawal air tawar. Retensi protein dan retensi energi dalam pengobatan P1 (0,6% lisin), P2 (1,2% lisin), P3 (2,4% lisin) dan P4 (4,8% lisin) berbeda secara signifikan dengan perlakuan P0 (kontrol). Kualitas air selama 40 hari perlakuan ditetapkan pada suhu 27-300 C, pH 7,5-8,5, amonia 4 mg / l dan oksigen terlarut 4 mg / l.                                                                 AbstractAmino acids are the smallest components that compose proteins. A number of amino acids will be conducted to one another through the intermediary of peptide bonds to form proteins. Amino acids have divided into two; those are essential amino acids and non-essential amino acids. The essential amino acids are amino acids that can not be synthesized by the body of fish; therefore the essential amino acids must be in feed. Lysine is one of the ten essentials amino acids , the function of lysine are for the growth and repair body tissues. This research was aimed to determine the effect of lysine in commercial feed on protein retention and energy retention of freshwater Bawal.The method used is experiment with a completely randomized design as an experimental design. The treatment used is different lysine levels , namely P0 ( 0 % ) , P1 ( 0.6 % ) , P2 ( 1.2 % ) , P3 ( 2.4 % ) , P4 (4.8 % ) and treatment was repeated 4 times. The main parameters were observed protein retention and energy retention on Bawal fresh water. Parameters measured were supported by water quality parameters. Analysis of the data using Analysis of Varian ( ANOVA ) and to determine the best treatment used Duncan 's multiple range test. The results showed the significant differences ( p < 0.05 ) in protein retention and energy were freshwater pomfret fish meat. Retention of protein and energy retention in treatment P1 ( 0.6 % lysine ) , P2 ( 1.2 % lysine ) , P3 ( 2.4 % lysine ) and P4 ( 4.8 % lysine ) was significantly different with treatment P0 ( control ). The quality of water for 40 days treatment was set to temperature 27-300 C, pH 7.5-8.5, ammonia 4 mg/l and dissolved oxygen 4 mg/l.

scholarly journals Negligible risk of zoonotic anisakid nematodes in farmed fish from European mariculture, 2016 to 2018

2021 ◽  
Vol 26 (2) ◽  
Author(s):  
Maria Letizia Fioravanti ◽  
Andrea Gustinelli ◽  
George Rigos ◽  
Kurt Buchmann ◽  
Monica Caffara ◽  
...  
Keyword(s):  
Atlantic Salmon ◽  
Transmission Risk ◽  
Fish Parasites ◽  
Gilthead Seabream ◽  
Farmed Fish ◽  
Eu Regulation ◽  
Zoonotic Risk ◽  
Freezing Treatment ◽  
Zoonotic Parasites ◽  
Anisakid Larvae

Background The increasing demand for raw or undercooked fish products, supplied by both aquaculture and fisheries, raises concerns about the transmission risk to humans of zoonotic fish parasites. This has led to the current European Union (EU) Regulation No 1276/2011 amending Annex III of Regulation (EC) No 853/2004 and mandating a freezing treatment of such products. Zoonotic parasites, particularly anisakid larvae, have been well documented in wild fish. Data on their presence in European aquaculture products, however, are still scarce, except for Atlantic salmon (Salmo salar), where the zoonotic risk was assessed as negligible, exempting it from freezing treatment. Aim To evaluate the zoonotic Anisakidae parasite risk in European farmed marine fish other than Atlantic salmon. Methods From 2016 to 2018 an observational parasitological survey was undertaken on 6,549 farmed fish including 2,753 gilthead seabream (Sparus aurata), 2,761 European seabass (Dicentrarchus labrax) and 1,035 turbot (Scophthalmus maximus) from 14 farms in Italy, Spain and Greece. Furthermore, 200 rainbow trout (Oncorhynchus mykiss) sea-caged in Denmark, as well as 352 seabream and 290 seabass imported in Italy and Spain from other countries were examined. Fish were subjected to visual inspection and candling. Fresh visceral organs/fillet samples were artificially digested or UV pressed and visually examined for zoonotic anisakid larvae. Results No zoonotic parasites were found in any of the fish investigated. Conclusions The risk linked to zoonotic Anisakidae in the examined fish species from European mariculture appears negligible. This study laid the groundwork for considerations to amend the current EU regulation.

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