scholarly journals Draft Genome Sequences of Three Strains of Geobacillus stearothermophilus Isolated from a Milk Powder Manufacturing Plant

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Sara A. Burgess ◽  
Murray P. Cox ◽  
Steve H. Flint ◽  
Denise Lindsay ◽  
Patrick J. Biggs
Keyword(s):  
New Zealand ◽  
Draft Genome ◽  
Milk Powder ◽  
Manufacturing Plant ◽  
Geobacillus Stearothermophilus ◽  
Genome Sequences ◽  
Manufacturing Environment ◽  
Powder Manufacturing

Three strains of Geobacillus stearothermophilus (designated A1, P3, and D1) were isolated from a New Zealand milk powder manufacturing plant. Here, we describe their draft genome sequences. This information provided the first genomic insights into the nature of G. stearothermophilus strains present in the milk powder manufacturing environment.

scholarly journals Influence of Cations on Growth of Thermophilic Geobacillus spp. and Anoxybacillus flavithermus in Planktonic Culture

2012 ◽  
Vol 78 (7) ◽  
pp. 2477-2481 ◽  
Author(s):  
Ben Somerton ◽  
Jon Palmer ◽  
John Brooks ◽  
Edward Smolinski ◽  
Denise Lindsay ◽  
...  
Keyword(s):  
Optical Density ◽  
Milk Powder ◽  
Manufacturing Plant ◽  
Planktonic Culture ◽  
Content Type ◽  
Free Ions ◽  
Thermophilic Bacilli ◽  
Anoxybacillus Flavithermus ◽  
Powder Manufacturing

ABSTRACTFree ions of Na+, K+, Ca2+, and Mg2+influenced the optical density of planktonic cultures of thermophilic bacilli.Anoxybacillus flavithermusE16 andGeobacillussp. strain F75 (milk powder manufacturing plant isolates) andA. flavithermusDSM 2641 andG. thermoleovoransDSM 5366 were studied. Ca2+and Mg2+were associated with increases in optical density more so than Na+and K+. Overall, it appeared that Ca2+and/or Mg2+was required for the production of protein in thermophilic bacilli, as shown by results obtained withA. flavithermusE16, which was selected for further study.

scholarly journals Genome Sequences of Malonate-PositiveCronobacter sakazakiiSerogroup O:2, Sequence Type 64 Strains CDC 1121-73 and GK1025, Isolated from Human Bronchial Wash and a Powdered Infant Formula Manufacturing Plant

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
H. R. Chase ◽  
G. R. Gopinath ◽  
J. Gangiredla ◽  
I. R. Patel ◽  
M. H. Kothary ◽  
...  
Keyword(s):  
Infant Formula ◽  
Draft Genome ◽  
Sequence Type ◽  
Powdered Infant Formula ◽  
Manufacturing Plant ◽  
Cronobacter Sakazakii ◽  
Genome Sequences ◽  
Manufacturing Facility ◽  
Bronchial Wash

We introduce draft genome sequences of strains CDC1121-73 (human bronchial wash isolate) and GK1025 (powdered infant formula manufacturing facility isolate), which are both malonate-positiveCronobacter sakazakiiserogroup O:2, sequence type 64. Assemblies for these strains have sizes of 4,442,307 and 4,599,266 bp and % G+C contents of 56.9 and 56.7, respectively.

scholarly journals Draft Genome Sequences of 14 Strains of Pseudomonas Isolated from Prunus sp. Plants

2018 ◽  
Vol 6 (3) ◽  
Author(s):  
Sandra B. Visnovsky ◽  
Ashley Lu ◽  
Preetinanda Panda ◽  
Robert Taylor ◽  
Andrew R. Pitman
Keyword(s):  
Decision Making ◽  
New Zealand ◽  
Plant Material ◽  
Draft Genome ◽  
Genomic Data ◽  
Genome Sequences

ABSTRACT We present here the draft genome sequences of 14 Pseudomonas strains isolated from Prunus sp. plants in New Zealand and overseas. These new genomic data will be used to improve the detection of Pseudomonas strains found in imported plant material at the New Zealand border, improving the time involved in the process of biosecurity decision-making.

scholarly journals Draft Genome Sequences of Pectobacterium carotovorum subsp. actinidiae ICMP 19971 and ICMP 19972, Two Strains Isolated from Actinidia chinensis with Symptoms of Summer Canker in South Korea

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Sandra B. Visnovsky ◽  
Preetinanda Panda ◽  
Robert Taylor ◽  
Andrew R. Pitman
Keyword(s):  
New Zealand ◽  
South Korea ◽  
Draft Genome ◽  
Causal Agent ◽  
Pectobacterium Carotovorum ◽  
Actinidia Chinensis ◽  
Genome Sequences ◽  
Genetic Traits ◽  
Content Type ◽  
Carotovorum Subsp

ABSTRACT Pectobacterium carotovorum subsp. actinidiae is the causal agent of summer canker in kiwifruit plants in South Korea. We report here the draft genome sequences of two P. carotovorum subsp. actinidiae strains, ICMP 19971 and ICMP 19972, which were originally isolated from Actinidia chinensis with symptoms of summer canker. These genome sequences will aid in the identification of genetic traits associated with their unusual capacity to cause canker and help understanding of the threat these exotic enterobacteria pose to the New Zealand kiwifruit industry.

scholarly journals Draft Genome Sequences of Seven Extended-Spectrum β-Lactamase-Producing Escherichia coli Strains Isolated from New Zealand Waterways

2021 ◽  
Vol 10 (11) ◽  
Author(s):  
Sara A. Burgess ◽  
Margaux Francois ◽  
Anne C. Midwinter ◽  
Patrick J. Biggs
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Resistant Genotype ◽  
Content Type ◽  
Esbl Gene ◽  
Extended Spectrum ◽  
The Mean

ABSTRACT Draft genomes of seven extended-spectrum β-lactamase (ESBL)-producing Escherichia coli strains recovered from New Zealand waterways are described. The mean genome size was 5.1 Mb, with 4,724 coding sequences. All genomes contained the ESBL gene blaCTX-M, and one carried a plasmid-mediated AmpC gene, blaCMY-2. A multidrug-resistant genotype was detected in three isolates.

scholarly journals Draft Genome Sequences of Eight Strains of Campylobacter helveticus Isolated from Cats and a Dog in New Zealand

2020 ◽  
Vol 9 (5) ◽  
Author(s):  
Krunoslav Bojanić ◽  
Anne C. Midwinter ◽  
Els Acke ◽  
Jonathan C. Marshall ◽  
Angela J. Cornelius ◽  
...  
Keyword(s):  
New Zealand ◽  
Dna Sequences ◽  
Type Strain ◽  
Draft Genome ◽  
Companion Animals ◽  
Gc Content ◽  
Genome Sequences ◽  
Content Type

The draft genome sequences for eight isolates of Campylobacter helveticus isolated from companion animals are described and compared with that of the type strain. On average, the genomes are 1,825,025 bp long and have a GC content of 34.4% and 1,885 coding DNA sequences (CDSs). CRISPRs were detected in only one isolate and phages in none.

scholarly journals Draft Genome Sequences of Two New Zealand Xanthomonas campestris pv. campestris Isolates, ICMP 4013 and ICMP 21080

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Dhairyasheel Desai ◽  
Jin-Hua Li ◽  
Eline van Zijll de Jong ◽  
Robert Braun ◽  
Andrew Pitman ◽  
...  
Keyword(s):  
New Zealand ◽  
Xanthomonas Campestris ◽  
Draft Genome ◽  
Bacterial Pathogen ◽  
Genome Sequences ◽  
Specific Factors ◽  
Xanthomonas Campestris Pv Campestris

Xanthomonas campestris pv. campestris is a necrotrophic bacterial pathogen of crucifers. We report here the draft genome sequences of isolates ICMP 4013 and ICMP 21080 from New Zealand. These sequences will facilitate the identification of race-specific factors in X. campestris pv. campestris.

scholarly journals Draft Whole-Genome Sequences of Three Diarrheagenic Escherichia coli Strains Isolated from Farmed Deer in New Zealand

2018 ◽  
Vol 6 (16) ◽  
pp. e00300-18
Author(s):  
A. Springer Browne ◽  
Patrick J. Biggs ◽  
Alice Elliott ◽  
Patricia Jaros ◽  
Nigel P. French ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Cervus Elaphus ◽  
Red Deer ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Diarrheagenic Escherichia Coli

ABSTRACT Escherichia coli bacteria commonly colonize the gastrointestinal tracts of farmed ruminants. Cattle are a well-recognized reservoir of zoonotic E. coli; we report here, however, the draft genome sequences of three diarrheagenic E. coli strains isolated from farmed red deer (Cervus elaphus) in the Manawatu region of New Zealand.

scholarly journals Draft Genome Sequences of Two Strains of Xanthomonas arboricola pv. celebensis Isolated from Banana Plants

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
James Harrison ◽  
Murray R. Grant ◽  
David J. Studholme
Keyword(s):  
New Zealand ◽  
Pathogenic Bacteria ◽  
Draft Genome ◽  
Genome Sequences ◽  
Plant Pathogenic Bacteria ◽  
Xanthomonas Arboricola

We report here the annotated draft genome sequences of strains Xanthomonas arboricola pv. celebensis NCPPB 1832 and NCPPB 1630 (NCPPB, National Collection of Plant Pathogenic Bacteria), both isolated from Musa species in New Zealand. This will allow the comparison of genomes between phylogenetically distant xanthomonads that have independently converged with the ability to colonize banana plants.

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