scholarly journals Reduced Time to Positive Cutibacterium acnes Culture Utilizing a Novel Incubation Technique: A Retrospective Cohort Study

2019 ◽  
Vol 3 ◽  
pp. 247154921984082
Author(s):  
Steven L Bokshan ◽  
Jose Ramirez Gomez ◽  
Kimberle C Chapin ◽  
Andrew Green ◽  
E Scott Paxton

Introduction Cutibacterium acnes ( C. acnes) is a common pathogen in postoperative shoulder infections. The purpose of this study was to evaluate the time to positive cultures for C. acnes and compare our experience before and after implementation of a regulated anaerobic chamber system. We hypothesized that this would reduce the time to identify positive cultures. Methods This was a retrospective review of 34 patients with cultures obtained from the shoulder that were positive for C. acnes. The time until positive result was evaluated before and after implementation of a regulated anaerobic incubation chamber. Results Following implementation of the regulated anaerobic incubation chamber, the time until C. acnes culture growth significantly decreased from 6.5 days (range 3–10 days) to 4.9 days (range 2.75–10 days) (mean difference: 1.6 days, 95% confidence interval: 1.06–2.66 days; P = .002). True infections had a significantly shorter time to positive culture compared to contaminants (5.5 vs 6.8 days, respectively, P = .003). Increased number of positive culture specimens correlated with a shorter time to positivity (Spearman rank = −0.58, P = .007). Conclusion Improved anaerobic culture protocols and techniques may lead to greater accuracy and earlier diagnosis and initiation of treatment of postoperative shoulder infections.

2020 ◽  
Vol 57 (2) ◽  
Author(s):  
Nataša Tozon ◽  
Majda Biasizzo ◽  
Leon Ščuka ◽  
Tamara Potočnik ◽  
Marjeta Redek ◽  
...  

A clinical study has been conducted to test the efficacy of Ecocid® S, a biocidal agent. The active substance is potassium peroxysulphate and is used in clinical practice after the mechanical cleaning of various surfaces that act as potential sources of infection transmission. We determined 29 swabbing points, from which 87 samples were collected with cotton swabs. Swabs were submitted for microbiological testing to evaluate microbial contamination before cleaning, and before and after disinfection with Ecocid® S. We submitted 63 swabs from 21 swabbing points for further statistical analysis. Five swabs were excluded because the presence of bacteria in the swabs before disinfection had not been determined. The clinical study on the efficacy of Ecocid® S disinfectant showed that it is effective with an average reduction in contamination of 95.75%. The disinfectant was also active with a significantly reduced time of action: it was removed with dry paper towels from all sampling points, except the floor scales, only 5 to 10 minutes after application. The time required for the proper preparation of examination tables and other equipment in clinical practice is of vital importance for a smooth workflow.Key words: animals; disinfection; potassium peroxysulphate; Ecocid® S ZMANJŠANJE ŠTEVILA BAKTERIJ PO UPORABI RAZKUŽILA ECOCID®S (RAZKUŽILO NA OSNOVI KALIJEVEGA PEROKSISULFATA) V PROSTORIH KLINIKE ZA MALE ŽIVALIPovzetek: S klinično študijo smo želeli ugotoviti učinkovitosti biocidnega razkužila ECOCID®S. Aktivna snov v razkužilu je kalijev peroksisulfat, ki se na klinikah uporablja za razkuževanje različnih površin, ki predstavljajo ključna mesta za prenos okužb, po njihovem mehaničnem čiščenju. Določili smo 29 vzorčnih mest, na katerih smo z uporabo bombažnih brisov odvzeli 87 vzorcev. Z mikrobiološkim testiranjem smo ugotavljali stopnjo kontaminacije pred čiščenjem, ter pred in po razkuževanju z ECOCID®S. Za statistično obdelavo smo uporabili 63 rezultatov z 21 vzorčnih mest. Pet rezultatov je bilo izločenih iz obdelave, ker je bila že pred razkuževanjem stopnja kontaminacije pod mejo detekcije uporabljene metode. S klinično študijo učinkovitosti razkužila Ecocid®S smo ugotovili povprečno 95,75 % zmanjšanje števila kontaminantov po uporabi razkužila. Razkužilo je bilo učinkovito tudi ob skrajšanem času delovanja le 5 do 10 minut po nanosu. Zaradi zagotavljanja tekočega dela na kliniki je izredno pomemben čas, ki je potreben za ustrezno pripravo površin in druge opreme za pregled živali, zato je razkužilo Ecocid® S primerno za uporabo na veterinarskih klinikah, saj hitro in učinkovito zmanjša bakterijsko kontaminacijo.Ključne besede: živali; dezinfekcija; kalijev peroksisulfat; Ecocid® S


2018 ◽  
Vol 2018 ◽  
pp. 1-9
Author(s):  
Yoshitaka Uchida ◽  
Hirosato Mogi ◽  
Toru Hamamoto ◽  
Miwako Nagane ◽  
Misato Toda ◽  
...  

Riverbank soil ecosystems are important zones in terms of transforming inorganic nitrogen (N), particularly nitrate (NO3−-N), in soils to nitrous oxide (N2O) gases. Thus, the gasification of N in the riverbank soil ecosystems may produce a greenhouse gas, N2O, when the condition is favourable for N2O-producing microbes. One of the major N2O-producing pathways is denitrification. Thus, we investigated the denitrification potentials along Shibetsu River, Hokkaido, Japan. We sampled riverbank soils from eight sites along the Shibetsu River. Their denitrification potentials with added glucose-carbon (C) and NO3−-N varied from 4.73 to 181 μg·N·kg−1·h−1. The increase of the denitrification after the addition of C and N was negatively controlled by soil pH and positively controlled by soil NH4+-N levels. Then, we investigated the changes in 16S rRNA bacterial community structures before and after an anaerobic incubation with added C and N. We investigated the changes in bacterial community structures, aiming to identify specific microbial species related to high denitrification potentials. The genus Gammaproteobacteria AeromonadaceaeTolumonaswas markedly increased, from 0.0 ± 0.0% to 16 ± 17%, before and after the anaerobic incubation with the excess substrates, when averaged across all the sites. Although we could not find a significant interaction between the denitrification potential and the increase rate of G. AeromonadaceaeTolumonas, our study suggested that along the Shibetsu River, bacterial response to added excess substrates was similar at the genus level. Further studies are needed to investigate whether this is a universal phenomenon even in other rivers.


2014 ◽  
Vol 571-572 ◽  
pp. 164-168
Author(s):  
Yin Jun Zhang

Silkworm egg incubation is a very complicated process and is hard to establish the mathematical model. In order to improve the temperature and humidity of silkworm incubation chamber control method, the paper deal with the method of iteration learning control looking for expected input. Based on the summary of human experience, designing learning rule is given. The simulation result shows iterative learning control has ideal tracking control.


Author(s):  
Zeynep Güngördü Dalar ◽  
Güzin İskeleli ◽  
Mert Ahmet Kuşkucu ◽  
Mehmet Demirci ◽  
Penbe Çağatay ◽  
...  

Objective: The most important bacteria of the conjunctival microbiota are Staphylococcus epidermidis, diphteroid rods, Corynebacterium spp. and Cutibacterium acnes. Especially biofilm formation of S. epidermidis is very important for contact lens related infections. For this purpose, we aimed to examine the changes in the presence of biofilm-forming S. epidermidis and other coagulase-negative staphylococci in conjunctival swabs taken before and after lens usage in 140 patients (90 hydrogel, 50 silicone hydrogel) who were prepared to wear lenses. Methods: Coagulase-negative staphylococci isolated from the conjunctival microbiota identified standard clinical microbiological methods, after identification of S.epidermidis strains with API Staph; Slime production was determined by Congo red agar, standard tube and molecular methods. Results: S.epidermidis was the most frequently isolated species in conjunctival microbiota before and after lens usage. Before lens usage, slime positive S. epidermidis strains were found as 45-50% but after lens usage it was 59% in hydrogel contact lens users and 70.2% in silicone hydrogel contact lens users. For the investigation of slime production, 82 (50.9%) of 161 S. epidermidis strains were found positive by using Congo red agar, 61 (37.8%) by standard tube method and 91 (56.5%) by molecular methods. Conclusion: The result of our study suggests that there are no significant changes in bacterial ratios before and after lens use, but bacteria such as S. epidermidis can predispose to infections by using slime production and contact lens factor. Also; molecular methods and Congo Red Agar method were found to be more reliable than the Standard Tube method.


2020 ◽  
Vol 102-B (7_Supple_B) ◽  
pp. 52-56
Author(s):  
Jacob M. Elkins ◽  
Douglas A. Dennis ◽  
Lindsay Kleeman-Forsthuber ◽  
Charlie C. Yang ◽  
Todd M. Miner ◽  
...  

Aims Of growing concern in arthroplasty is the emergence of atypical infections, particularly Cutibacterium (formerly Propionibacterium) sp. infections. Currently, the dermal colonization rate of Cutibacterium about the hip is unknown. Therefore, the aim of this study was to investigate colonization rates of Cutibacterium sp. at locations approximating anterior and posterolateral approaches to the hip joint. Methods For this non-randomized non-blinded study, 101 adult patients scheduled for hip or knee surgery were recruited. For each, four 3 mm dermal punch biopsies were collected after administration of anaesthesia, but prior to antibiotics. Prebiopsy skin preparation consisted of a standardized preoperative 2% chlorhexidine skin cleansing protocol and an additional 70% isopropyl alcohol mechanical skin scrub immediately prior to biopsy collection. Two skin samples 10 cm apart were collected from a location approximating a standard direct anterior skin incision, and two samples 10 cm apart were collected from a lateral skin incision (suitable for posterior, direct-lateral, or anterolateral approaches). Samples were cultured for two weeks using a protocol optimized for Cutibacterium. Results A total of 23 out of 404 cultures (collected from 101 patients) were positive for a microorganism, with a total of 22 patients having a positive culture (22%). Overall, 15 of the cultures in 14 patients were positive for Cutibacterium sp. (65%), of which Cutibacterium acnes comprised the majority (n = 13; 87%). Other isolated microorganisms include coagulase-negative Staphylococcus (n = 6), Clostridium (n = 1), and Corynebacterium (n = 1). Of all positive cultures, 15 were obtained from the anterior location (65%), of which seven (60%) were from the most proximal biopsy location. However, these findings were not statistically significant (anterior vs lateral, p = 0.076; proximal vs distal, p =0.238). Conclusion Approximately 14% (14/101) of the patients demonstrated a positive Cutibacterium colonization about the hip, the majority anteriorly. Given the high colonization rate of Cutibacterium, alternative skin preparations for total hip arthroplasty should be considered. Cite this article: Bone Joint J 2020;102-B(7 Supple B):52–56.


2020 ◽  
Vol 9 (1) ◽  
pp. 168 ◽  
Author(s):  
Seo-Yeon Park ◽  
Hei Sung Kim ◽  
Se Hoon Lee ◽  
Sungjoo Kim

Systemic antibiotics are extensively used to control moderate to severe acne. Hence, it is crucial to understand their impact on the skin microbiota, which is supposedly perturbed. The purpose of this study was to compare the makeup and diversity of the skin microbiota in acne patients before and after taking oral antibiotics. A longitudinal cohort study was performed on 20 participants with moderate to severe facial acne with no recent use of oral and topical antibiotics/retinoids. Patients were prescribed oral doxycycline, 100 mg, twice daily for six weeks. Skin areas on the cheek were sampled for 16S ribosomal RNA gene sequencing at baseline, and after six weeks of doxycycline treatment. Ten males and 10 females aged 11 to 44 years with a median Investigator’s Global Assessment score of 3 (moderate) were enrolled. At baseline, Cutibacterium acnes (formerly Propionibacterium acnes) was the most dominant species followed by Staphylococcus epidermidis. Acne severity showed a positive correlation with the abundance of Cutibacterium acnes. Across all subjects, antibiotic treatment reduced clinical acne grades and was associated with a 1.96-fold reduction in the relative abundance of Cutibacterium acnes (p = 0.01, 95% CI −22% to −3%). Marked changes were also identified in other bacterial species, such as Cutibacterium granulosum (formerly Propionibacterium granulosum), which increased by 4.46-fold (p = 0.02, 95% CI 0.004% to 0.9%) in the treated samples. In general, antibiotics administration was associated with an increase in bacterial diversity (alpha diversity). Principal coordinates analysis showed mild clustering of samples by patient (analysis of similarity, R = 0.135, p = 0.04) whereas there was scant clustering with treatment (ANOSIM, R = 0.005; p = 0.29). In conclusion, we found individuals with acne to have a unique microbial signature. Acne treatment with systemic antibiotics was associated with changes in the composition and diversity of skin microbiota, especially Cutibacterium acnes, which correlates with acne severity. Our study provides insight into the skin microbiota in acne and how it is modulated by systemic antibiotics.


Pathogens ◽  
2021 ◽  
Vol 10 (12) ◽  
pp. 1560
Author(s):  
Gustave Buname ◽  
Gapto Aristides Kiwale ◽  
Martha F. Mushi ◽  
Vitus Silago ◽  
Peter Rambau ◽  
...  

Background: Tonsillitis is an inflammation of the tonsils due to either viruses or bacteria. Here, we report the bacteria patterns on the tonsillar surface and tonsillar core tissue among patients scheduled for tonsillectomy at Bugando Medical Centre (BMC), Mwanza Tanzania. Methods: The study included 120 patients planned for tonsillectomy between April and July 2019. Swab samples from tonsillar surface pre-tonsillectomy and core post-tonsillectomy were collected. Culture was performed following the microbiology laboratory standard operating procedures. Data analysis was completed using STATA version 13, as per the study objectives. Results: The slight majority of participants were males (73; 60.83%) with median age of 6 years (interquartile range 4–11). The proportion of positive culture growth was higher on the surface than in core swab samples: 65 (54.2%) vs. 42 (35.0%), p = 0.003. The commonest bacterial pathogen detected from the surface and core were S. aureus in 29 (40.3%) and 22 (51.2%) participants, followed by S. pyogenes in 17 (23.6%) and 11 (25.6%), respectively. Methicillin-resistant Staphylococcus aureus (MRSA) was observed in 20/51 (39%) of isolates. Streptococcus pyogenes resistance to macrolides ranged from 8.3% for core isolates to 35.3% for surface isolates. Features suggestive of tonsillitis on histology were reported in 83 (73.5%) samples. Conclusion: More than two-thirds of patients undergoing tonsillectomy had a positive culture for possible bacterial pathogens. Staphylococcus aureus and Streptococcus pyogenes were the predominant bacteria detected with more than one third of Staphylococcus aureus being MRSA. More studies to investigate the treatment outcome of these patients are highly recommended.


2013 ◽  
Vol 58 (2) ◽  
pp. 1161-1166 ◽  
Author(s):  
Richard O. Phillips ◽  
Fred S. Sarfo ◽  
Mohammed K. Abass ◽  
Justice Abotsi ◽  
Tuah Wilson ◽  
...  

ABSTRACTBuruli ulcer, an ulcerating skin disease caused byMycobacterium ulceransinfection, is common in tropical areas of western Africa. We determined the clinical and microbiological responses to administration of rifampin and streptomycin for 2 weeks followed by administration of rifampin and clarithromycin for 6 weeks in 43 patients with small laboratory-confirmed Buruli lesions and monitored for recurrence-free healing. Bacterial load in tissue samples before and after treatment for 6 and 12 weeks was monitored by semiquantitative culture. The success rate was 93%, and there was no recurrence after a 12-month follow-up. Eight percent had a positive culture 4 weeks after antibiotic treatment, but their lesions went on to heal. The findings indicate that rifampin and clarithromycin can replace rifampin and streptomycin for the continuation phase after rifampin and streptomycin administration for 2 weeks without any apparent loss of efficacy.


Blood ◽  
2012 ◽  
Vol 120 (21) ◽  
pp. 2171-2171 ◽  
Author(s):  
Agata Anna Nowak ◽  
David NF Harris ◽  
Michael Laffan ◽  
Carolyn Millar

Abstract Abstract 2171 Post operative bleeding is a common complication of cardiac surgery; its aetiology may be multifactorial but is often attributed to platelet dysfunction. However, at present no reliable point of care test (POCT) is available for this and patients are often managed empirically; approximately 40% receive pooled platelet transfusions but many require re-sternotomy. An automated microchip flow chamber system that directly measures platelet-collagen interaction under shear (1500s−1) has recently been developed (T-TAS; Total Thrombus-formation system; Zakros, Fujmori Kogyto, Japan). We hypothesized that this could be developed as a POCT to assess platelet function under shear, allowing targeted and more rational use of blood products. We used this system to study 20 patients aged 19–72 years, before and after cardiac surgery. The T-TAS was used to determine the onset of occlusion (time to 10kPa, T10) and primary haemostatic potential (AUCend-area under pressure curve). Haematocrit (Hct), platelet count and von Willebrand factor (VWF) levels and thromboelastography (TEG) were measured at the corresponding time points. Surgery resulted in a significant increase in time to occlusion onset (T10) (p=0.006; n=20, Figure 1A). Similarly, the AUCend significantly decreased after surgery (p=0.001, n=19; Figure 1B) with the majority of cases (12 out of 20) failing to occlude within 30 minutes. The change in T10 inversely correlated with change in AUCend(r=-0.5, p=0.02). VWF is essential for platelet adhesion to collagen under high shear stress. Higher VWF levels appeared to be associated with lower T10, but this was not significant and only observed prior to surgery. Moreover, no significant correlation between the change in T10 or AUCend and changes in VWF pre- and post-surgery was observed. Surprisingly, pre and post-operative hematocrit were both negatively correlated with AUCend (r=-0.5, p=0.03, n=11 and r=-0.5, p=0.02,n=11 respectively). No correlation was observed between platelet count and the T-TAS parameters. However, the change in AUCend (but not T10) was shown to correlate with the change in platelet count before and after surgery (r = 0.58, p = 0.01). Finally, T10 and AUCend values were not significantly altered in patients given anti-platelet drugs: aspirin and/or clopidrogel. This implies that the T-TAS is sensitive to the initial adhesion of platelets to VWF-collagen rather than to platelet activation and aggregation. These data demonstrate that cardiac bypass surgery affects VWF mediated platelet adhesion to collagen under flow and this can be detected using a microchip flow chamber system. The lack of correlation with VWF levels and apparently paradoxical effect of haematocrit suggest that the dominant mechanism for the impaired postoperative haemostasis is a decline in platelet function and in particular a decrease in adhesive function. This is likely to result from altered exposure and/or function of GPIb resulting from surgery and cardio-pulmonary bypass. Current POCTs are largely insensitive to primary haemostatic mechanisms, while conventional laboratory measures of primary haemostasis are non-physiological, and require a considerable expertise and time. As expected, TEG gave similar values pre and post-surgery for all subjects, indicating that a flow system is required to adequately evaluate primary haemostasis. The advantages of this novel automated microchip flow chamber system are the small blood volume required and the rapidity of results. Our data suggest a place for this system in a point-of care setting, providing useful assessment of haemostatic status following surgery and with the potential to improve patient management. Further studies are warranted. Disclosures: No relevant conflicts of interest to declare.


Sign in / Sign up

Export Citation Format

Share Document