scholarly journals GENETIC VARIABILITY OF Rottboellia cochinchinensis POPULATIONS IN SUGARCANE FIELDS

2016 ◽  
Vol 34 (3) ◽  
pp. 475-484 ◽  
Author(s):  
A.R. SCHIAVETTO ◽  
D. PERECIN ◽  
L.R. PINTO ◽  
C.A.M. AZANIA ◽  
F.S. ZERA ◽  
...  
Keyword(s):  
Genetic Variability ◽  
Genetic Similarity ◽  
Sao Paulo ◽  
The State ◽  
Group Method ◽  
Jaccard Coefficient ◽  
São Paulo ◽  
Pair Group ◽  
Analysis System ◽  
Rottboellia Cochinchinensis

ABSTRACT The hypothesis assumed was the existence of biotypes within populations, which has been the cause of difficulties in itchgrass control by farmers. For that, the genetic variability of three populations of Rottboellia cochinchinensis in sugarcane fields in the state of São Paulo was investigated by using the Amplified Fragment Length Polymorphism (AFLP) technique. Six primers were used to obtain molecular characterization data. AFLP gels were analyzed based on marker presence (1) and absence (0). Using NTSYs (Numerical Taxonomy and Multivariate Analysis System) software, the genetic similarity was calculated by the Jaccard coefficient and, from that, a dendrogram was built through the UPGMA (Unweighted Pair Group Method Arithmetic averages) method, besides determining the isopolymorphic marks. The average genetic similarities seen in the region was 0.742 for Igarapava, 0.793 for Mococa and 0.808 for Piracicaba. Between regions it was 0.730 (Igarapava vs Mococa), 0.735 (Mococa vs Piracicaba) and 0.694 (Igarapava vs Piracicaba). In line with the dendrogram, it is possible to detect the formation of two groups, one with 8 plants from Igarapava and Mococa and the other with 21 plants from Igarapava, Mococa and Piracicaba, as well as the presence of 1 discriminant individual from Piracicaba. It can be concluded that the genetic similarity among itchgrass populations from the state of São Paulo was high (72%), which denotes that the difficulties in chemical management are not only due to different biotypes but also due to other characteristics linked to tolerance of the species to herbicides. However, biotype existence cannot be discarded because of the polymorphic marks generating 22% average genetic variability.

scholarly journals Application of ITAP-PCR Techniques to Assess the Genetic Variability of Selected Cultivars of Winter Triticale (× Triticosecale Wittmack)

2019 ◽  
Vol 47 (3) ◽  
pp. 947-953
Author(s):  
Izabela SZUĆKO ◽  
Anna MĄDRACH
Keyword(s):  
Genetic Variability ◽  
Genetic Similarity ◽  
Group Method ◽  
Fast Method ◽  
Winter Triticale ◽  
Pair Group ◽  
Cereal Plant ◽  
Seed Market ◽  
Polymorphism Rate ◽  
Triticosecale Wittmack

The increasing use of triticale (× Triticosecale Wittmack) indicates that its position on the seed market is constantly strengthening; therefore, the research on its genetic variability is necessary to improve breeding process of new cultivars. The aim of the study was to assess the possibility of using the ITAP-PCR technique to analyse the genetic similarity of nine cultivars of winter triticale cultivated in Poland. Primers designed on the basis of 6 DNA transposon sequences commonly found in cereal plant genomes were used for the study. The average polymorphism rate in the genotypes used in the study was determined as 95.24%; in total, 75 bands were obtained, of which 73 were polymorphic. The PIC value ranged between 0.27 and 0.44, and was highest for the Hamlet primer. The lowest PIC value was observed for the Mutator primer. The average DI value was 0.34, MI - 4.08, AEI - 12.17 and IPI - 4.40. SI ranged from 36.7% to 1.7%. A dendrogram was created according to the unweighted pair group method with arithmetic mean (UPGMA), which in terms of genetic similarity divided the analysed winter triticale cultivars into two main similarity groups.We confirmed that ITAP technique of transposon-based marker is efficient and fast method to detect genetic variability between different winter triticale cultivars. In addition, the presence of analyzed transposon families in hexaploid triticale has not been studied earlier.

scholarly journals Genetic analysis of Melipona quadrifasciata Lep. (Hymenoptera: Apidae, Meliponinae) with RAPD markers

2002 ◽  
Vol 62 (4b) ◽  
pp. 923-928 ◽  
Author(s):  
A. M. WALDSCHMIDT ◽  
P. MARCO-JUNIOR ◽  
E. G. BARROS ◽  
L. A. O. CAMPOS
Keyword(s):  
Genetic Similarity ◽  
Rapd Markers ◽  
Genetic Distances ◽  
Minas Gerais ◽  
Sao Paulo ◽  
The State ◽  
São Paulo ◽  
Santa Catarina ◽  
Melipona Quadrifasciata ◽  
High Genetic Similarity

Melipona quadrifasciata ("mandaçaia") can be subdivided into two subspecies: M. q. anthidioides and M. q. quadrifasciata. In the present study we used RAPD markers to estimate intercolonial genetic variation among 69 colonies of Melipona quadrifasciata. Ten workers per colony were analyzed. The intercolony genetic distances based on RAPD markers ranged from 29.5% (colonies collected in the State of São Paulo vs colonies from the State of Minas Gerais) to 34.2% (São Paulo vs Santa Catarina). These results indicate a high genetic similarity among the colonies analyzed.According to the genetic distances two different groups could be distinguished. The first containing the samples from Santa Catarina region and the second, samples from Paraná, São Paulo, Minas Gerais, and Espírito Santo. Based on the molecular analysis, bees belonging to the different subspecies M. q. quadrifasciata (from Santa Catarina) and M. q. anthidioides (from the other regions) were distinguished.

scholarly journals Genetic similarity of citrus fresh fruit market cultivars

2005 ◽  
Vol 27 (2) ◽  
pp. 332-334 ◽  
Author(s):  
Roberto Pedroso de Oliveira ◽  
Elizete Beatriz Radmann
Keyword(s):  
Citrus Sinensis ◽  
Genetic Similarity ◽  
Fresh Fruit ◽  
Group Method ◽  
Jaccard Coefficient ◽  
Arithmetic Average ◽  
Satsuma Mandarin ◽  
Pair Group ◽  
Leaf Tissues ◽  
High Genetic Similarity

The objective of this work was to assess the genetic similarity of the following citrus fresh fruit market seedless cultivars: Lane Late, Navelate, Navelina and Salustiana sweet oranges (Citrus sinensis (L.) Osbeck), Clemenules and Marisol mandarins (C. reticulata Blanco) and Okitsu satsuma mandarin (C. unshiu Marcovitch), and the hybrids Nova [C. clementina x (C. paradisi x C. tangerina)] and Ortanique (tangor probably derived from C. sinensis (L.) Osbeck x C. reticulata Blanco), utilizing isoenzymatic markers. Electrophoresis analysis of proteins extracted from leaf tissues was utilized to detect polymorphisms at ten isoenzymatic systems. Out of 30 alleles, 16 were polymorphic. The Jaccard coefficient was utilized to estimate the genetic similarity between the cultivars and the unweigthed pair-group method using an arithmetic average (UPGMA) was used to obtain the phenogram (NTSYS 1.7). The cultivars showed high genetic similarity (>72.5%), and were classified in five main groups: sweet oranges, 'Clemenules' and 'Marisol' mandarins, 'Nova', 'Ortanique', and 'Okitsu' satsuma mandarin.

scholarly journals The Genetic Variations And Relationship of Madura Tobacco (Nicotiana tabacum L.) Based on Molecular Characteristics

2017 ◽  
Vol 21 (2) ◽  
pp. 70
Author(s):  
Fitri Nadifah ◽  
Budi Setiadi Daryono
Keyword(s):  
Nicotiana Tabacum ◽  
Genetic Similarity ◽  
Random Amplified Polymorphic Dna ◽  
Group Method ◽  
Molecular Characteristics ◽  
Pair Group ◽  
Nicotiana Tabacum L ◽  
New Genotype ◽  
Analysis System ◽  
Relationship Of

Madura has at least 22 genotypes of local tobaccos (Nicotiana tabacum L.). This diversity could potentially produce new genotype of tobaccos with superior characters. However, information of the genetic diversity of Madura tobaccos is still limited. The aim of this study was to determine the genetic variation and relationship of 24 genotypes of Madura tobaccos with Random Amplified Polymorphic DNA (RAPD) analysis. In this research we were used 6 single primers for amplification: (OPA-18, OPB-12, OPB-14, OPC-1, OPC-8 and OPC-19) and 2 mixture primers ((OPB-12+OPC-8) and (OPC-1+OPC-19)). Genetic similarity and clustering was analyzed with Unweighted Pair Group Method Arithmetic (UPGMA) method with Numerical Taxonomy and Multivariate Analysis System (NTSYS) version 2.10 software. From this research we found that OPA18425, OPB12450, OPC8500, (OPC19+OPC1)550 and OPC8800 can be used as specific markers. Polymorphic bands percentage with mixture primers was relatively equal with single primers (<60%). The dendogram showed that Madura tobacco genotypes consist of 2 main clusters: cluster A (22 genotypes) and cluster B (2 genotypes: Bukabu Sa’ang and Prancak-95). Madura tobaccos had high genetic similarity between genotypes ranging from 0.80-1.00.

The Daily Routine of Students in the Classroom

2020 ◽  
Vol 8 (3) ◽  
pp. 157-163
Author(s):  
Lilian Marques Silva
Keyword(s):  
Elementary School ◽  
Public School ◽  
Data Collection ◽  
New Technologies ◽  
Sao Paulo ◽  
The State ◽  
Daily Routine ◽  
São Paulo ◽  
Access To Information ◽  
Technological Advances

The almost instantaneous access to information provided by technological advances has revolutionized the behavior of people and of the classrooms too. Teachers had to adapt themselves to new technologies to maintain students interested and attentive to the discipline being taught. In this work, the behavior of the students of the 6th grade of elementary school II during class was observed. The school chosen is a public school in the State of São Paulo (Brazil). The research was based on data collection. The students were observed by being filmed during six months. The results showed that the students were interested in the classes and committed to the activities. The place that the student chooses to sit in the classroom influences the behavior of the teacher, because the more distant the teacher, the less he participates in the class.

Sound-Politics in São Paulo

2019 ◽  
Author(s):  
Leonardo Cardoso
Keyword(s):  
Crime Control ◽  
State Intervention ◽  
Sao Paulo ◽  
The State ◽  
Ethnographic Study ◽  
São Paulo ◽  
Cultural Rights ◽  
Point Of Entry ◽  
Wide Range ◽  
Analytical Category

This book is an ethnographic study of controversial sounds and noise control debates in Latin America’s most populous city. It discusses the politics of collective living by following several threads linking sound-making practices to governance issues. Rather than discussing sound within a self-enclosed “cultural” field, I examine it as a point of entry for analyzing the state. At the same time, rather than portraying the state as a self-enclosed “apparatus” with seemingly inexhaustible homogeneous power, I describe it as a collection of unstable (and often contradictory) sectors, personnel, strategies, discourses, documents, and agencies. My goal is to approach sound as an analytical category that allows us to access citizenship issues. As I show, environmental noise in São Paulo has been entangled in a wide range of debates, including public health, religious intolerance, crime control, urban planning, cultural rights, and economic growth. The book’s guiding question can be summarized as follows: how do sounds enter and leave the sphere of state control? I answer this question by examining a multifaceted process I define as “sound-politics.” The term refers to sounds as objects that are susceptible to state intervention through specific regulatory, disciplinary, and punishment mechanisms. Both “sound” and “politics” in “sound-politics” are nouns, with the hyphen serving as a bridge that expresses the instability that each concept inserts into the other.

scholarly journals Crustacea, Isopoda, Oniscidea Latreille, 1802: new continent record and distribution extension in Brazil

Check List ◽  
2010 ◽  
Vol 6 (2) ◽  
pp. 217 ◽  
Author(s):  
Mariana Juventina Magrini ◽  
Paula Beatriz Araujo ◽  
Marcio Uehara-Prado
Keyword(s):  
Rio Grande ◽  
Sao Paulo ◽  
The State ◽  
Southeastern Brazil ◽  
Pitfall Traps ◽  
São Paulo ◽  
Undescribed Species ◽  
Rio Grande Do Sul ◽  
Serra Do Mar ◽  
First Time

Terrestrial Isopods were sampled in four protected Atlantic Forest areas located in Serra do Mar, state of São Paulo, southeastern Brazil. A total of 2,217 individuals of six species (Atlantoscia sp., Benthana werneri, Pseudodiploexochus tabularis, Pudeoniscus obscurus, Styloniscus spinosus and Trichorhina sp.) were captured in pitfall traps. The exotic species S. spinosus is recorded for the first time for the Americas. Another introduced species, P. tabularis, previously recorded only from the state of Rio Grande do Sul, had its geographic distribution extended to the state of São Paulo. The most abundant isopods in this study belong to an undescribed species of Atlantoscia.

scholarly journals Towards Providing Effective Data-Driven Responses to Predict the Covid-19 in São Paulo and Brazil

Sensors ◽  
2021 ◽  
Vol 21 (2) ◽  
pp. 540
Author(s):  
Fabio Amaral ◽  
Wallace Casaca ◽  
Cassio M. Oishi ◽  
José A. Cuminato
Keyword(s):  
Learning Strategies ◽  
Time Series Data ◽  
Sao Paulo ◽  
The State ◽  
Data Driven ◽  
Series Data ◽  
São Paulo ◽  
Time Data ◽  
Unified Framework ◽  
Infected People

São Paulo is the most populous state in Brazil, home to around 22% of the country’s population. The total number of Covid-19-infected people in São Paulo has reached more than 1 million, while its total death toll stands at 25% of all the country’s fatalities. Joining the Brazilian academia efforts in the fight against Covid-19, in this paper we describe a unified framework for monitoring and forecasting the Covid-19 progress in the state of São Paulo. More specifically, a freely available, online platform to collect and exploit Covid-19 time-series data is presented, supporting decision-makers while still allowing the general public to interact with data from different regions of the state. Moreover, a novel forecasting data-driven method has also been proposed, by combining the so-called Susceptible-Infectious-Recovered-Deceased model with machine learning strategies to better fit the mathematical model’s coefficients for predicting Infections, Recoveries, Deaths, and Viral Reproduction Numbers. We show that the obtained predictor is capable of dealing with badly conditioned data samples while still delivering accurate 10-day predictions. Our integrated computational system can be used for guiding government actions mainly in two basic aspects: real-time data assessment and dynamic predictions of Covid-19 curves for different regions of the state. We extend our analysis and investigation to inspect the virus spreading in Brazil in its regions. Finally, experiments involving the Covid-19 advance in other countries are also given.

scholarly journals Modelling the impact of delaying vaccination against SARS-CoV-2 assuming unlimited vaccine supply

2021 ◽  
Vol 18 (1) ◽  
Author(s):  
Marcos Amaku ◽  
Dimas Tadeu Covas ◽  
Francisco Antonio Bezerra Coutinho ◽  
Raymundo Soares Azevedo ◽  
Eduardo Massad
Keyword(s):  
Mathematical Model ◽  
Vaccination Campaign ◽  
Vaccination Rate ◽  
Sao Paulo ◽  
The State ◽  
São Paulo ◽  
Health Authorities ◽  
The World ◽  
The Moment ◽  
The Impact

Abstract Background At the moment we have more than 177 million cases and 3.8 million deaths (as of June 2021) around the world and vaccination represents the only hope to control the pandemic. Imperfections in planning vaccine acquisition and difficulties in implementing distribution among the population, however, have hampered the control of the virus so far. Methods We propose a new mathematical model to estimate the impact of vaccination delay against the 2019 coronavirus disease (COVID-19) on the number of cases and deaths due to the disease in Brazil. We apply the model to Brazil as a whole and to the State of Sao Paulo, the most affected by COVID-19 in Brazil. We simulated the model for the populations of the State of Sao Paulo and Brazil as a whole, varying the scenarios related to vaccine efficacy and compliance from the populations. Results The model projects that, in the absence of vaccination, almost 170 thousand deaths and more than 350 thousand deaths will occur by the end of 2021 for Sao Paulo and Brazil, respectively. If in contrast, Sao Paulo and Brazil had enough vaccine supply and so started a vaccination campaign in January with the maximum vaccination rate, compliance and efficacy, they could have averted more than 112 thousand deaths and 127 thousand deaths, respectively. In addition, for each month of delay the number of deaths increases monotonically in a logarithmic fashion, for both the State of Sao Paulo and Brazil as a whole. Conclusions Our model shows that the current delay in the vaccination schedules that is observed in many countries has serious consequences in terms of mortality by the disease and should serve as an alert to health authorities to speed the process up such that the highest number of people to be immunized is reached in the shortest period of time.

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